Thermostichus vulcanus: NIES2134_120980
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Entry
NIES2134_120980 CDS
T05980
Name
(GenBank) hypothetical protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
tvn
Thermostichus vulcanus
Brite
KEGG Orthology (KO) [BR:
tvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tvn03400
]
NIES2134_120980
DNA repair and recombination proteins [BR:
tvn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NIES2134_120980
Archaeal homologous recombinant proteins
NIES2134_120980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_27
SbcC_Walker_B
Rad50_zn_hook
AAA_15
AAA_29
AAA_21
Laminin_II
ABC_tran
RNA_helicase
Motif
Other DBs
NCBI-ProteinID:
BAY52822
LinkDB
All DBs
Position
2127918..2130929
Genome browser
AA seq
1003 aa
AA seq
DB search
MIPRQLVLRNFLSYRQATLPFAGLHLACICGANGAGKSSLLEAIAWALWGQSRASREDDV
IYYGEMEAQVTFEFSVQGQTYRVVRLRRREQHTVLELQIQTAVGYTSLTGRSLRATQEKI
IQILGLDYATFVNSAYLRQGRADEFMAKRPSERKQLLATLLGLDQYETLAEAARDRARDY
KAQISVLEQRLQTLADQLAQEPHLRTQQAAVSQQIQQQRQQVQQCQQRLQAQQAAYQIHQ
LQQRDYEHLQQQRDTLAATIAHLEHQRQTLRQEQAAIADLEARAPLLAAAVSQWQSLKTA
EAQLQQCFANYQQLRQERDRHQQSLDQQRQDLLRTLHGLESQQQFLLEQCQQLEKLLKQE
NQIVAAFEQLQRARAHLQAQEALQQKVFPLLQAKQRLELERQQQEQRLRSRRDELQQLWQ
HLHQQIERQPALQEAVTLITAQIATLEKQRIYQDHVREKGLERRRFLEQLQTRQREYERQ
IHQLEQRLELLNQPGAICPLCQRPLDREHYQAVRQRHIAEKEELLNQVWVIREQLAVTER
EIQVLRREYLTVGYEISQLTQLFEQRGQLQQQLQSTQELEPQLDRLAREIQQIEGQLRNG
HQESLGELQAIEAELARLNYDEKTLAIARGQVEKWRWAEAKEQELRQAQRQYQQIQQHLP
NLIAQQEALQRQLNALETTSPLAQTLARIDQQLAALAYDPDRHAQIQAQLAALAADYEAY
ETLQRGRSRQPQLRQDLEHLEETLQQQQAQLQRITEKLATLEETARAASRLAADLHQQQQ
HLLKQQQTLEATLAHHGKLSAELEQLHRLRQEYEQGQQTLAHLRHQYRLYCELAQALGKN
GIPALLIETVLPHLEAETNHILGRLSNHQLHVQFITQRSRRRSGADTKPIETLDILIADC
QGTRPYESYSGGEAFRINFALRLALARLLAQRSGSDVQFLIIDEGFGTQDAQGCERLIAA
LNAIAPEFHCILAITHVPALKEAFQTRIEVTKVAGASQLSIIT
NT seq
3012 nt
NT seq
+upstream
nt +downstream
nt
atgattccacgtcaactagtattgcgcaacttcctcagctatcgccaagcaactcttccc
tttgcggggttacatctggcctgtatttgtggtgccaatggggcgggcaagtcctcgctc
cttgaggcgatcgcttgggcactctgggggcaaagccgcgctagccgtgaggatgatgtg
atctactacggcgaaatggaagcccaggtaacctttgagtttagcgtccaagggcagacc
tatcgggtagtacggttgcggcgacgggaacaacatacggttttggagttgcagattcag
acggctgtgggctatacctcgctaacggggcgatcgctacgagcaacacaggaaaaaatc
attcaaattcttggccttgactacgccaccttcgtcaacagcgcctatttgcgccaaggc
cgcgccgatgaatttatggccaaacgccccagtgagcgcaagcaactgctggccaccctt
ctgggtttggatcaatacgagaccctagcggaagcggcccgcgatcgcgcccgtgactac
aaagcccaaatcagtgttctggaacagcggctgcagaccctcgccgatcaattggcccaa
gagccccacctgcgtacccaacaggcagcggtgagccagcagattcaacagcaacggcag
caggtacagcagtgccaacaacgactccaagcgcaacaggccgcctaccagatccatcaa
ctccaacagcgggactatgaacacttgcaacagcagcgcgatacccttgcggcaacgatc
gcccatctggagcaccagcgccagaccctgcgccaagaacaggccgctattgcggatttg
gaagcccgtgcccccctcttggcagccgccgtcagccaatggcagagcctgaaaacggcg
gaagctcaattgcagcagtgttttgctaactatcaacagctgcgccaagagcgcgatcgc
caccagcagagccttgaccaacagcgccaagaccttctgcgcaccctccatgggttggag
agccagcagcaatttcttctggaacaatgccagcagttggaaaagctcctcaagcaagaa
aatcagattgtcgctgcttttgaacagttacagcgagcccgcgctcatctccaagcccaa
gaagcgctgcaacaaaaagtctttcccctcctgcaagccaaacagcgcctcgaactggaa
cggcaacagcaggaacaacgcctccgcagccggcgcgatgaattgcagcagttgtggcag
catctccatcaacagatagagcggcaacccgctcttcaagaggcagtgaccctgattaca
gcgcagattgccacccttgaaaaacagcgtatctatcaagaccatgtgcgggaaaaggga
ctggagcgccgccgcttcctcgaacaactgcaaactcgccagcgggagtatgagcggcaa
attcatcaactggagcagcgcttagaactgctgaatcaaccgggagccatttgccccctg
tgtcaacgtcccctcgatcgcgagcactaccaggctgtccggcaacgccatatcgccgaa
aaagaggaactgctgaatcaggtgtgggtcatccgcgagcaactggcagtgaccgagcgc
gaaattcaagttttacggcgggaatatctaacggtgggctatgagatctcgcaactgacg
caactgtttgagcagcgggggcaactccagcagcaactccagagcacccaagagttagaa
ccgcaactggatcgcctagccagggaaattcagcagattgagggacagctcaggaacggc
catcaggaaagcctaggggaactgcaagcgattgaggcggaactggcacgcctcaactat
gacgagaaaacgctggcgatcgcccgcggccaagtggaaaagtggcgttgggccgaagcc
aaggaacaggaactccgccaagcccaacggcaataccagcaaattcagcaacacctgccc
aacttgatcgcccaacaggaggcactgcaacggcagctcaacgcccttgaaaccacttcc
cccctcgcccagaccttggccaggattgaccagcaattggccgccttagcctacgatcca
gaccgccatgcccaaattcaggcccaactggctgcactggcagcggactatgaggcctat
gagaccctgcaacgggggcgatcgcgccaaccccaactccgccaagatctcgagcaccta
gaggaaacgctgcagcaacaacaggcccaactgcaacgcatcactgagaaactcgccacc
cttgaagaaactgctcgcgccgccagccgccttgccgccgatctccatcaacagcaacaa
cacctcctcaagcaacagcagaccctcgaggccacccttgcccaccatggcaaactcagc
gccgaattagagcaactccaccgcctaagacaagaatacgaacagggacagcaaaccctc
gcccacctccgccatcaataccgcctctactgcgagctagcccaagccttaggcaaaaat
ggcattcccgccctgctcattgaaaccgtcttgccccatctagaggcagaaaccaatcat
atcctgggtcgcctcagcaaccaccaactccatgtgcagttcattacccagcgcagccgc
cgtcgcagtggagccgacaccaagcccattgaaacccttgatattctcattgccgattgc
caagggactcgtccctacgaaagctattccgggggggaagcctttcgcatcaattttgct
ttgcgcttagccttagcacgactattggcccagcgatcggggagtgatgtccagtttctc
attattgatgaggggttcggtacccaagatgcccagggttgtgaacggctgattgccgcc
ttgaacgcgatcgcccccgaatttcactgcattctcgccattacccacgttcctgccctc
aaggaagcctttcaaacccgcattgaggtcaccaaagtagccggagcctcccaactgagc
atcatcacttaa
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