Thermostichus vulcanus: NIES2134_122190
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Entry
NIES2134_122190 CDS
T05980
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
tvn
Thermostichus vulcanus
Pathway
tvn00300
Lysine biosynthesis
tvn00470
D-Amino acid metabolism
tvn01100
Metabolic pathways
tvn01110
Biosynthesis of secondary metabolites
tvn01120
Microbial metabolism in diverse environments
tvn01230
Biosynthesis of amino acids
Module
tvn_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
tvn00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NIES2134_122190 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NIES2134_122190 (dapF)
Enzymes [BR:
tvn01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
NIES2134_122190 (dapF)
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GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
BAY52707
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Position
complement(2254547..2255407)
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AA seq
286 aa
AA seq
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MSLSFQKYQGLGNDFLLIDNRHQEELLLTPEQAQFWCDRHFGVGADGVIFLLRGTGESDY
RMRMYNADGSVAQMCGNGIRCLAKFIFALEGRSAGEIVRYRIDTLAGLIVPEVQADGQVT
VDMGKPRLLAQQIPTTLAAADQKVVDVPLTVGDRQWLVTCVSMGNPHCVTFVEDVAALDL
AVLGPQFEHHPAFPQRTNTEFVQVLGSDRLRMRVWERGAGMTLACGTGACATLVAAVLTG
CLSPGGDQAQATVELPGGDLQIRWDLPSQHLYMTGPALAVFSGTLP
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgagcctatcttttcagaagtaccaagggttaggtaacgatttcctcctcattgataat
cgccatcaggaagagctgctcttaaccccggaacaagcccaattctggtgcgatcgccac
tttggcgtcggggccgatggtgtcatttttttactgcggggaactggggaaagcgactac
cgcatgcggatgtacaacgctgatggctccgtggcgcaaatgtgcggcaatggcattcgc
tgtttggccaagttcatttttgcccttgagggtcgctctgctggtgaaattgtccgctac
cgcattgacaccctggccggtctcattgtaccggaggtacaggcggatggtcaggtcacg
gtggatatgggcaaaccccgacttttggcgcagcagattcccaccaccttagcagccgca
gatcaaaaagtggttgatgtccccctaacggtgggcgatcgccagtggttggtgacctgc
gtgagtatgggcaatccccactgtgtcacctttgtggaggatgtggctgccctagattta
gccgtccttggtccacagtttgagcatcaccccgcttttccccagcgcaccaatactgag
tttgtgcaagtcctagggagcgatcgcctgcggatgcgcgtctgggaacggggagccggt
atgacccttgcctgtggaacgggggcctgtgccaccctcgtcgctgctgttttgaccggt
tgcctgagtcctgggggcgatcaagcccaagccacggttgaactgccagggggtgatctc
cagattcgctgggatttacctagccaacatctgtatatgaccggacctgccctcgcagtc
tttagcggtaccttgccctag
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