Thermostichus vulcanus: NIES2134_124260
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Entry
NIES2134_124260 CDS
T05980
Name
(GenBank) tRNA-pseudouridine synthase I
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
tvn
Thermostichus vulcanus
Brite
KEGG Orthology (KO) [BR:
tvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tvn03016
]
NIES2134_124260
Enzymes [BR:
tvn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
NIES2134_124260
Transfer RNA biogenesis [BR:
tvn03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NIES2134_124260
Prokaryotic type
NIES2134_124260
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
UPF0730
Motif
Other DBs
NCBI-ProteinID:
BAY52504
LinkDB
All DBs
Position
complement(2461559..2462410)
Genome browser
AA seq
283 aa
AA seq
DB search
MTAIAPSQSGQRLALLIQYQGTHFHGWQRQVGQRTVQEVIEQAIASVVNHPVSVVAAGRT
DTGVHAAGQVAHVTVNSPIPVHRWPGILNARLPADVVIRAAAAVPPDWHARFSALWRRYR
YTLYTDPCPNIFLRPWTWHYYYAPLDVAKMAAVLQPLVGRHHLSAFHRSGSNRAHSWVEV
QAVSCQRRGALVEIEVQASGFLYGMMRLLVGLLVQVGQGQRSPASFTEIWQQEQRHLVKY
AAPPSGLCLLGVGYPESPFPLALCTEAMPQFQLASVCPELSIA
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgacggcgatcgcaccttcccagagcggccaacgcttggcactgcttattcagtaccag
ggcacccacttccacggctggcaacggcaagtgggacagcgcacggtacaggaggtgatt
gagcaggcgatcgccagtgttgtcaatcatcccgtctctgttgttgcagcagggcgcacg
gacacaggggttcatgctgccggtcaagtggcccatgtcacggtcaactcgcctattccc
gttcatcgttggccagggattctcaatgctcgcttgcctgctgatgtggtgattcgtgct
gcggcggcggtgccgcctgactggcatgcccgtttctcagcgctgtggcgtcgctatcgc
tataccctctataccgatccctgccccaatatctttctgcggccttggacatggcactac
tactatgcccccttggatgtggcaaaaatggcagcagtgcttcagccattggtggggcgg
catcacctcagcgcatttcaccgttctggctccaatcgtgcccattcttgggtggaggtg
caggcggtgagttgccagcggcgcggtgcccttgtggaaattgaggtacaagcttcaggg
tttctctacggcatgatgcgcctgttggtgggtctcttggtacaggtgggacaaggccag
cgatcgcccgccagttttacggaaatttggcaacaggagcaacgccaccttgtcaagtat
gctgcaccccccagcggtctttgtctattgggggtgggctatcctgaatcacctttcccc
ctggccctgtgcaccgaagcgatgccccagttccagttagcctctgtttgccctgaattg
tccattgcatag
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