KEGG   Thermoplasma volcanium: TVG0641301
Entry
TVG0641301        CDS       T00042                                 
Symbol
TVG0641301
Name
(GenBank) hypothetical protein large helicase related protein LHR homolog
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
tvo  Thermoplasma volcanium
Brite
KEGG Orthology (KO) [BR:tvo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tvo03400]
    TVG0641301 (TVG0641301)
Enzymes [BR:tvo01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     TVG0641301 (TVG0641301)
    5.6.2.6  RNA 3'-5' helicase
     TVG0641301 (TVG0641301)
DNA repair and recombination proteins [BR:tvo03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    TVG0641301 (TVG0641301)
SSDB
Motif
Pfam: DEAD_assoc DEAD WH_Lhr Helicase_C ResIII TFIIE_alpha wHTH-PRTase_assc RepB AAA_19 SNF2-rel_dom HopBA1 GerE
Other DBs
NCBI-ProteinID: BAB59786
UniProt: Q97B15
LinkDB
Position
636160..641301
AA seq 1713 aa
METEDHAFRIEDIFPFLDPYVSKWFDINYRSLTEPQKYAIPFIHEGRNVLVSSPTGTGKT
LTAFLSIINELFMLARSGKLEDKIYCVYISPLKALANDVNKNLRAPLEGIYKIADEDGIN
LPKIRVSVRSGDTSEGERQKMARKPPHILITTPESFSLTLSSPRMRENLRDVKYVIIDEI
HEISSTKRGSLLSANMERLEALRPGILRIGLSATQSPIEEIAKYLVGFSGTSSRPCEIVE
VKGEKYLDLKTITPVPDLTKVSYEVANDRMYDIIADLVKQYRTTLIFTNTRSGTEHVALR
LRSRGIESLEAHHSSMGKEQRVEVENKLKNGELKCVITSTSLELGVDIGYIDLVIQIGSP
KSVSKGLQRIGRSGHGINELSKGIFIVFNLDDLVECAVLTRAAYDRHIDRVDIPKNPLDV
LAQVLVGMAVERVWDAKEAYEVLRSSYTFHTLSWDDYVLTLEYLSGELENLEIYPKIWFD
KEQNSFGKKKSTRMIYFMNVGTIPDEANYKAINEKGKSVGELSDKFVERLKPGDVFVLGA
RTYIFERTVRNRVYVRSVTGMKPTVPSWTGEMLPRSYDLGVLIGEFRKTVSNMLENGEDP
TRMLIERYHVDENGARSIISYIKAQKQFSIPTEDHLFVEGLEEPDGVFGAVFHVPLGRKV
NDALSRSYALAISNKYQTNTRITVTDDGFIIYSENKIPLGEAVKLINSENLEDYVRRAIS
NTELFKQRFRHCAARSLMILRSYKGYDISVARQQLRSDKLLNELQKHQDFSIIKETYREI
MEDIMDVPRAIEYVKDVIDRGAYTIRPYSRETSPFSYGMIMAGSSDIVMMEDRSKMLKEL
QGRMLEKIYGTTSIAFLFDNQKNVDEYFKRKIPRVYDLESLVRFANHFPYIDVLKERFNS
PYSYANTDIKNIVENAINLGLIKSVYVRGVQWCSFENYPYLRSLFRRSLQLEKSDSEVLS
KIDGQSFSELRDLTKMGEEELRKVIGRLESAFLIERKFRNGMTIYVKNEDDRYVSQEEAL
SRLLIKLLGSYGPSTLEEIEIKIPFDEDTIKSALDALISSGQVVYDYITPVYSKQYMLSS
DIEAMTKTKDVVPWRFSKITKKVQNIEQYFDLYGFAFDEGNIISRLQEKGEVFLDPMVRA
GYILKGHFIKSKVTYISRWLIDVLYTLRDHEVSQNEEAVLEAIKSGYTEEKISEKLNMEK
RIVRQIIRSLEYKMMVGKSDSELVITDARDIGRGKALEKLIEAYGPITLEELRKFFWFNP
DISSVDKEKVKSIFYNGQNYYFSGEKPDDQWDAVLTLNDPVNMYMQIYTDNIDYNRILLS
KGRELATFYLEERDGVYWISSLSMYGDDGLETTSALRRYFNSNPIVLLDSSSIKSYSPDF
SPRGNVLLLPEGETIALDEKEILKYSFEKVRKQNRSHSTLYEAFSSIIFGLREFIEALRY
GLTETNVENYFDSSLLYLFNGPYDKQAYATRESISIYRSLRSYQLTKEEQQVIKFIMGVD
SATEREIERGCGLESAVVKAATDRLFKYRILARNFERKYFYVQERYSTRDALKIIIDYSI
RYFGFITPSRMSTMIGVPESEIYSIASSLKNIKRFYNVITRELYFSYWDISEPSEHSSEA
VQEVVSGKDIFVLFYSDYFRMIFGGSFDLFLYSEGEFRLAANVSKVGHYMKIKKYYGNED
HLKLLSTKLKAMGYSLISRKEGVDSERQYSQKL
NT seq 5142 nt   +upstreamnt  +downstreamnt
atggaaactgaagatcatgcgtttaggatagaggacatatttccatttctagatccttac
gtatccaaatggtttgacattaactatagatcactcaccgaacctcaaaaatatgctatt
ccatttatacacgagggcagaaatgtactggtatcaagccctactggcactggaaagaca
ttgactgcctttttatccatcataaatgagttatttatgctagctaggtctggaaaattg
gaggacaaaatatactgcgtatatataagtccattaaaagctctagctaacgatgttaat
aaaaaccttagggcgccgctagaaggcatatataaaattgcagacgaagacggaattaat
ttaccaaaaataagggtatccgttagatccggtgatacctcggagggagagaggcaaaag
atggcaagaaagcctccccacatactcattaccacgccagaatcattttcacttactcta
tcctcaccgagaatgagggaaaatttacgagacgttaagtacgtaataattgacgagata
cacgaaatatcttctacaaagagagggagcctactctccgcgaatatggaaagattggag
gccctgagaccaggcatacttagaatagggctgtcggcaactcaatcgccgatagaagaa
atagcgaagtatcttgttggattttctggtacgagttcgagaccgtgtgaaatagtagaa
gttaagggggagaaatatctagacttaaagacaattaccccagtaccagatctaaccaag
gtcagctatgaagtagcaaatgatcggatgtacgatataatagcagatcttgtgaagcag
tatagaacaacactcatatttaccaacactaggagtgggacagaacatgtagctttaagg
ctccgtagcagaggaattgaaagccttgaagcacaccattcgtctatgggcaaagaacag
agagttgaagttgaaaataaacttaaaaatggagaacttaaatgcgtcataacatctacc
tccttggagctaggagtagacataggatacatagatcttgttatacagataggcagtccg
aaatcagtaagcaagggccttcagagaataggcagatctggccacggaattaatgagctt
tctaagggcatatttatcgtattcaacttagacgatctggttgagtgcgcggttctaaca
agagctgcctatgatagacatatagatcgcgttgatatacctaaaaatcctcttgatgta
ctggcgcaggtactcgtaggcatggcagttgaaagagtatgggatgcaaaagaagcctat
gaagtgttaaggtcttcttataccttccacactctatcatgggatgattacgtcctaaca
cttgagtatctctcaggagaacttgaaaatcttgagatctatccaaaaatatggtttgat
aaggaacagaattcgttcggaaagaaaaaaagtacaagaatgatctatttcatgaacgtt
ggtacaattccggacgaggctaactacaaggccataaatgaaaaaggtaaaagtgttgga
gaactaagcgataaattcgttgagagactaaagcccggagatgttttcgtattgggcgca
aggacatacatatttgagagaacagtcaggaacagggtgtatgtacgttcagtaacggga
atgaagcccaccgttccatcttggaccggcgagatgctcccaagaagctatgaccttggt
gtgttgataggggaattcaggaaaacagtctctaatatgttagaaaacggtgaagatccg
actaggatgttgattgagagataccatgttgatgaaaacggtgcaagaagcataatatct
tatatcaaagcgcagaagcagttttcaattccaactgaagatcacctttttgtggaaggc
ctggaagaaccagatggggtattcggagcagtctttcacgtaccacttgggcgaaaggta
aacgacgcgctttccagatcctatgctctagctatatccaataaatatcagaccaataca
aggataacggtaacagacgacggcttcataatatactcagaaaataagatcccgttgggc
gaggctgtaaaattaataaactcagaaaatttagaggattacgtacgtagggctatatca
aacaccgagctcttcaagcagcgtttcaggcattgcgctgcaaggtcattgatgatactt
cgatcttataagggttacgatatatcggttgcaaggcaacagcttaggagtgataagctg
ttaaacgaacttcaaaagcatcaggatttctcaataataaaggaaacgtatagagaaata
atggaagatattatggatgtcccaagggccatagaatacgtcaaggacgtcattgatcgc
ggtgcttatacgataaggccttattctcgtgaaacaagtccattttcttatggaatgata
atggccggttcctcagatatcgttatgatggaagaccgttctaaaatgctcaaggaactt
caggggcgcatgttagaaaagatatatggtactacatctattgcctttctttttgataac
cagaagaacgtcgatgagtacttcaagaggaagatacctagagtatacgatttagaatcg
ctcgtaaggtttgcgaatcatttcccatatattgatgtattaaaggaacgattcaactca
ccttattcttatgctaataccgatattaagaatatcgttgagaacgcaattaatcttgga
ctaattaagtctgtatacgtgaggggcgtacagtggtgttcattcgaaaattatccatac
ttacgttcgctcttccgcaggtcgttgcagctggaaaagtctgattctgaggtgctttcg
aagatagatggccaatcgttttctgagttgagagacttaacgaagatgggtgaagaggaa
cttcgaaaagtaattgggaggcttgaatctgcgttcctcattgagaggaaattcaggaat
ggaatgactatttacgtaaaaaatgaggacgatagatacgtttcacaagaggaagcgctc
agcaggcttttaattaaactcctgggatcttacgggccaagcacgcttgaggaaatcgaa
ataaagatacctttcgatgaggatactattaaatccgctctagacgctttaatctcctca
ggtcaagtggtttatgattacataactccagtttacagcaaacagtacatgctttcgtcc
gacattgaggcaatgacgaaaacaaaagatgtagttccatggcgcttctcaaaaataacg
aaaaaagtacagaacatcgaacaatactttgatctttacggattcgcatttgatgaggga
aatattatatcaaggctccaagaaaaaggtgaagttttcctcgatccaatggtaagagca
ggctatatcctaaaaggacatttcattaagtctaaagttacgtatatttcgagatggttg
atcgatgttctctatactctacgtgatcacgaagtcagccaaaacgaagaagcggttctc
gaagccataaagtctggttatacggaggaaaaaatatcagaaaaactaaacatggagaag
aggatagtaaggcaaattatacgatcattagaatataaaatgatggttggcaaatcagat
tcagaattagttattacagatgcaagagatataggccgtggaaaagccttagaaaaattg
atagaggcctacggcccaattacgcttgaagagttaagaaagtttttctggttcaatcca
gatatttcttctgtggacaaagaaaaagtaaagagcatattttacaatgggcaaaattat
tatttttcaggagagaaaccagatgaccaatgggacgcagttttgacgttgaacgatcca
gtgaatatgtatatgcaaatatatacggataatatagactacaacaggatactactaagc
aaaggcagggaactcgccactttctatttagaagaaagggacggggtttattggatcagc
agcctttctatgtatggagacgatggcttggagactacaagcgctttaagacgatacttt
aattcgaatccgattgtactgctggatagttcatcgatcaagagttattctcccgatttt
tctccccgtggtaacgttttgttgttacctgaaggcgaaacgatagccttggacgaaaaa
gagatattaaaatattcatttgaaaaggtgagaaagcagaaccggagccatagtacgtta
tatgaggcattttcatccattatattcggtctcagggaatttattgaggccttgagatac
ggactgaccgaaacaaatgtggaaaattactttgattcatctctgctatacctatttaat
gggccatacgacaaacaggcatacgctacaagggaatcgatatcaatttacagaagccta
agatcataccaactgacgaaggaagagcagcaggtaataaaattcataatgggcgtagat
tcagctacagaacgggagatagaacgtggatgcggtcttgaatctgcagttgttaaggct
gcaactgataggctcttcaaatatcggatccttgccaggaactttgaaaggaagtatttc
tatgtacaggaaagatattcaacaagggacgcactgaaaataataatagactattctatc
agatattttggtttcataacgccatcgcggatgtctacaatgatcggcgttccagaatct
gagatctattctattgcttcttctttaaaaaatataaaaaggttctacaatgtcatcacc
agagagctttatttctcttactgggatataagcgaaccatcagaacacagtagcgaggcg
gttcaggaggtagtatccggaaaggatatattcgtcctattctattccgattatttcagg
atgatcttcggcggttcctttgacctcttcctgtactcggaaggcgaatttaggctagct
gcaaacgtatctaaggttgggcattacatgaaaattaagaaatattacgggaatgaggat
catcttaaattactttccacgaaattgaaggcgatgggatattctctaatctcaagaaag
gagggggtcgatagtgaaagacaatattcacaaaaactctaa

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