Thermoplasma volcanium: TVG0754205
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Entry
TVG0754205 CDS
T00042
Symbol
TVG0754205
Name
(GenBank) rep helicase single-stranded DNA-dependent ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
tvo
Thermoplasma volcanium
Pathway
tvo03420
Nucleotide excision repair
tvo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tvo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
TVG0754205 (TVG0754205)
03430 Mismatch repair
TVG0754205 (TVG0754205)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tvo03400
]
TVG0754205 (TVG0754205)
Enzymes [BR:
tvo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TVG0754205 (TVG0754205)
DNA repair and recombination proteins [BR:
tvo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
TVG0754205 (TVG0754205)
MMR (mismatch excision repair)
Other MMR factors
TVG0754205 (TVG0754205)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
PDDEXK_1
AAA_11
UvrD_C_2
AAA_30
AAA_14
Motif
Other DBs
NCBI-ProteinID:
BAB59892
UniProt:
Q97AQ9
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All DBs
Position
complement(754205..756862)
Genome browser
AA seq
885 aa
AA seq
DB search
METTLVSAGPGTGKTTSLSSKYVSLVKSGVDQNDILCLTFTNKAVDNMREAILKTAQREG
VELELHKLNVHTFHSFAFHFVKNLGYRDIINHNFLRKLIYDYLTNNHVFNYDRSYIIDRM
VPSIENAIRYVKSYNIGRIEDPQNILNSVREDMDRVIKEKKIDKLTLDQAEIFMTHFINI
INLYEQEKENRKVIDYNDMLIKFINLSEKPHYKYVLIDELQDVSDLEAKIAGSVAENIYA
VGDKKQSIFGFQGGGFSNFISNFPNHQLKYLTEDHRNGKAILKYAKEFFKKSTKGGLDED
LEKLTSVRDHDGYVEVIEGSYSDILSVLDRFPRGSVGIIARTNAQVINISKVLDSHGIKY
SSSATSSNSEMAKNDVLDFLRMILFDDDDFLIKGLFTPFSGLSIAEAYNIKESVESGNSS
LLNFTTLNSIKKKFSVSGIKELLQIFENVVLPVAVSLGSDYYGTAKRIYMNLQEYLYMYG
INDRQDLLNYLEVCDQELTESSNTERISVLTVHKAKGLEFDHVIYLPKTTRDNFSVVDLC
AYELIREKTKRDISTELEDEDTRVDFVAITRPVHTLIIITDHLERYANKYAIKSGKPTAP
STEHYSITSVDPNIEAYSAFINGRFDQAINALDRYAWIRNLIRDNMKKNNVISFSLLQSL
QDPFQFLKEHILGLKYKVPAMKQGSEIHTLAELLFKKESTELEIPPNYRPQYDNILKVID
DMQKRYGAVQISAEEEVTLPGQYLLPEAKSFILYGKLDAVFQSGDYYYIVDYKTDKTTTR
QKEHTKQLHFYKTIYSKSQSLDRSKIKTLIAYISLRTPVNTGKVDYRLEEVDNPNSINLE
EEIRKYITFTEDPDKFIEYLLNFNRVNHNVDDSLVARILGYLKHR
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atggagacaacacttgtatctgcaggtcctggtacaggaaaaacaactagcctctccagt
aaatacgtcagtctagtaaaatctggcgttgatcaaaatgatatactctgcctaacgttt
acaaacaaggccgttgataatatgagggaagcaattctaaaaactgcccaaagggaaggt
gtagaactagaattacacaaacttaatgtccatacattccatagctttgcttttcacttt
gtaaaaaatttaggttatagagatattataaaccacaattttttgagaaagctaatctat
gattatcttacaaataaccatgtctttaactacgatagatcgtacataattgatagaatg
gttccgagcatagaaaatgcaataagatacgtgaaaagctataacataggccgtatcgaa
gatccacagaatattttgaattccgtccgtgaggacatggatcgtgtcattaaagagaaa
aagatagataaattaacattggatcaagctgaaatatttatgactcatttcataaatata
ataaatttatatgaacaggaaaaagaaaaccgaaaggttatagattacaacgatatgctt
atcaaattcatcaatctttctgaaaaaccacattacaaatacgtattaatcgacgagttg
caggatgtctcagatcttgaggctaagattgccggatcagttgcagaaaatatctatgca
gtaggggataaaaaacaatcgatatttggtttccaaggtggtggtttctcaaatttcata
tctaatttcccgaatcaccaactcaaatacttaacagaagatcacaggaacggaaaagca
atattaaaatatgccaaggaattttttaaaaaaagtactaagggcggccttgatgaggat
cttgagaagttgacaagcgtaagggatcatgatggatacgtcgaagtaattgaaggctct
tattctgatatcctaagcgttttggatagatttccgagagggtctgttgggataatagct
aggacaaatgcacaagttatcaatatatcaaaagtcctagattcacatgggattaaatat
tcatcgagcgcaacttcgtcaaatagcgaaatggcgaaaaatgatgtattagattttctc
cgtatgatactttttgacgatgatgattttttaattaaaggtctttttacaccttttagt
ggattgtcaattgcagaagcctataatataaaggaaagcgttgaaagcggcaactcgagt
cttctaaatttcactacgttaaattccataaagaaaaaatttagtgtaagcggtatcaag
gaactccttcaaatattcgaaaacgtagtactccctgtagcagtatctttaggctctgac
tattatgggacagctaagaggatttacatgaacttgcaggaatacctctatatgtatgga
ataaatgacaggcaagatcttcttaattatttagaagtgtgcgatcaagaactgacggaa
tcttcgaatactgaaaggatctctgtattaacagtgcataaggcaaaaggtctcgaattt
gatcatgtaatttatcttccaaagactactagggataattttagcgttgtagatctttgt
gcctatgaacttataagggaaaaaactaaaagagatatatcgacagaacttgaagacgaa
gatacaagggtagattttgtagctataactaggccggtacatacgttaataattataact
gaccatttggaaagatatgccaacaaatatgcgattaaatcgggaaaaccaacagcacct
tcgactgaacattactccattactagtgtagatccaaacatagaagcttattcagccttc
atcaacggcaggtttgatcaggctattaacgctctagatagatatgcttggataaggaac
cttatacgcgataatatgaagaaaaacaacgttatttcattctctcttttgcagagcttg
caagatccgtttcaattcctaaaggagcacatccttggattgaagtacaaagtgccagca
atgaagcaaggttcggagatacacacactcgccgaacttttgttcaaaaaggaatcaaca
gagttagaaattccaccgaattatcgaccccaatatgataatatactgaaggtcattgat
gatatgcagaagaggtacggtgcagtgcaaatatcggcggaggaagaggtgactttacct
ggacaatatttgctgccagaggctaaatcgtttatcctatatggaaagctggacgcagtt
tttcagtccggggactactattacatagttgattataaaacagataaaaccacgactcgg
cagaaagaacacacgaaacagcttcatttttacaaaaccatatacagcaaaagccaatct
ttagaccgatcaaaaattaagactctaatagcatacatatcattaagaacaccagtaaat
acgggtaaagttgattatcgtttggaggaagtcgataatccaaatagcataaatctggaa
gaagagataagaaaatacataacattcacggaggatccagataagtttatagagtattta
ctcaatttcaaccgggtaaaccataatgtggatgattcattggttgccaggatactcgga
tatctaaaacacagataa
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