Thermoplasma volcanium: TVG0998758
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Entry
TVG0998758 CDS
T00042
Symbol
TVG0998758
Name
(GenBank) cell cycle control protein 48
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
tvo
Thermoplasma volcanium
Pathway
tvo04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tvo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
TVG0998758 (TVG0998758)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tvo03019
]
TVG0998758 (TVG0998758)
03009 Ribosome biogenesis [BR:
tvo03009
]
TVG0998758 (TVG0998758)
04131 Membrane trafficking [BR:
tvo04131
]
TVG0998758 (TVG0998758)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tvo04147
]
TVG0998758 (TVG0998758)
Messenger RNA biogenesis [BR:
tvo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
TVG0998758 (TVG0998758)
Ribosome biogenesis [BR:
tvo03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
TVG0998758 (TVG0998758)
Membrane trafficking [BR:
tvo04131
]
SNARE
SNARE associated proteins
Others
TVG0998758 (TVG0998758)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
TVG0998758 (TVG0998758)
Exosome [BR:
tvo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
TVG0998758 (TVG0998758)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
RuvB_N
AAA_2
CDC48_2
AAA_14
AAA_5
TIP49
AAA_22
AAA_33
nSTAND3
RNA_helicase
IstB_IS21
AAA_28
Mg_chelatase
AAA_18
AAA_17
NPHP3_N
AAA_24
AAA_7
Sigma54_activat
SLFN-g3_helicase
AAA_3
ABC_tran
AAA_lid_PRS2_C
AAA_19
TsaE
DUF815
Parvo_NS1
Zeta_toxin
PhoH
Motif
Other DBs
NCBI-ProteinID:
BAB60117
UniProt:
Q97A35
LinkDB
All DBs
Position
996521..998758
Genome browser
AA seq
745 aa
AA seq
DB search
MDNSSGIILRVAEANSTDPGMSRVRLDESSRRLLDAEIGDVVEIEKARKTVGRVYRARPE
DENKGIVRIDSVMRNNCGASIGDKVRVRKVRTEIAKKVTLAPIIRKDQRLKFGEGIEEYV
QRALIRRPMLEQDNISVPGLTLAGQTGLLFKVVKTMPGKVPVEIGEETKIEIREEPASEV
LEEVSRVSYEDIGGLSEQLGKIREMIELPLKHPELFERLGITPPKGVILYGPPGTGKTLI
ARAVANESGANFLSINGPEIMSKYYGQSEQKLREIFSKAEETAPSIIFIDEIDSIAPKRE
EVQGEVERRVVAQLLTLMDGMKERGHVIVIGATNRIDAVDPALRRPGRFDREIEIGVPDR
NGRKEILMIHTRNMPLGMDEEQKNKFLEEMADYTYGFVGADLAALVRESAMNALRRYLPE
IDLDKPIPTEILEKMVVTEEDFKNALKNIEPSSLREVMVEVPNVHWDDIGGLEDVKREVK
ETVELPLLKPDVFKRLGIRPSKGFLLYGPPGVGKTLLAKAVATESNANFISIKGPEVLSK
WVGESEKAIREIFKKAKQVAPAIVFLDEIDSIAPRRGTTSDSGVTERIVNQLLTSLDGIE
VMNGVVAIGATNRPDIMDPALLRAGRFDKLIYIPPPDKDARLSILKVHTKNMPLAPDVDL
DSIAQRTEGYVGADLENLCREAGMNAYRENPDATQVSQKNFIDALKTIRPSIDEEVIKFY
KSISETMGKSVSEKRKELQDQGLYL
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atggataacagcagcggtataatactcagggttgccgaggcaaactcaacagatccaggc
atgtctagggttaggcttgatgaatcgtctaggcgcctgctcgatgccgagatcggcgat
gtagtagagatcgagaaggccagaaaaactgtaggcagggtatacagggccaggccggag
gacgagaacaaggggatagtaaggatagacagtgtaatgaggaataactgcggcgcttcc
ataggggataaggtaagggtcagaaaagtaaggacagagatagccaagaaagtaacgctt
gcacccataatacgtaaagatcaacgcttaaaatttggcgaaggcatagaggaatacgtc
caaagggcgcttataagaaggccaatgctcgaacaggacaacataagcgtcccaggttta
acgcttgcaggccaaaccggacttttatttaaggttgtaaaaactatgcctggcaaggta
ccagttgaaatcggagaagagacaaagatagagataagggaggaacctgcctctgaagta
ttggaggaggtatctagggttagttatgaagatataggaggtctctcagaacagctgggc
aagatcagggagatgatcgagcttccattaaagcatcctgaactattcgaaaggctgggc
attacacctccaaagggtgttatactatatgggcctcctggaactggaaaaacccttatt
gctagagctgttgcaaatgaatctggggccaatttcctgtccataaacggaccggagata
atgagtaagtactatgggcagagcgagcaaaagctgagagagatattctcaaaggcagaa
gaaacagccccatctataatattcatagatgaaatagattcgattgcacccaagagggaa
gaggtacagggggaggtcgaaagaagagtagttgcacaactccttactttgatggacggt
atgaaggaacgcggtcacgtaatagtcataggtgcaaccaacaggatagacgcagtggat
ccagcgctgagaaggccaggaaggttcgacagagagatcgaaataggagttccagaccgc
aatggcagaaaggaaatcttaatgatacataccagaaacatgcctctaggcatggacgag
gagcagaaaaacaagttccttgaggaaatggctgactacacctatggatttgtaggagct
gatcttgccgccctcgtaagggagagtgcaatgaacgccctaaggaggtatctaccggaa
atcgacctagataagccgatacctacagaaatattggaaaaaatggttgttactgaagaa
gactttaagaatgcattgaagaacattgaaccaagcagcctcagagaggtaatggtcgaa
gtgcctaacgtacactgggatgacataggcggtctcgaagatgttaagagggaggtaaag
gaaactgtagaattgccgcttctaaagccagatgtgtttaagagattaggaataaggccg
tcgaaaggtttcttgttatacggtccgcccggagttggaaagacgctgttggccaaggcg
gttgccacagagagcaacgctaactttatatctattaagggcccggaggtattaagcaag
tgggtaggagagagcgagaaggctataagggaaatattcaagaaagcaaagcaagtcgcc
cctgctatagtattcctcgatgaaatagattctatagcgccaaggagaggtacgacaagc
gactcaggcgtcactgaaaggatagttaatcaactcctaacatcgctcgatggcatagag
gttatgaacggagttgtagccattggggccacgaataggccggatataatggatccagca
ctgcttagggctggaagatttgataaacttatctacataccgccaccggacaaggacgca
cgcctcagcatattaaaggtacataccaaaaatatgccgctcgcgccggatgtcgatctg
gacagcattgcccaaaggacagagggctacgtgggtgcagaccttgagaacctatgcagg
gaagcaggtatgaatgcctatcgagagaacccagatgcaactcaggtttcacagaagaac
tttattgatgcccttaagactataaggccatccatagatgaagaagtaataaagttctac
aagagcatcagcgaaaccatgggcaaatcggtatcggaaaagaggaaggagcttcaggat
cagggactgtatctgtga
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