Thermoplasma volcanium: TVG1022523
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Entry
TVG1022523 CDS
T00042
Symbol
TVG1022523
Name
(GenBank) endonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
tvo
Thermoplasma volcanium
Pathway
tvo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tvo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
TVG1022523 (TVG1022523)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tvo03400
]
TVG1022523 (TVG1022523)
Enzymes [BR:
tvo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
TVG1022523 (TVG1022523)
DNA repair and recombination proteins [BR:
tvo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
TVG1022523 (TVG1022523)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
BAB60143
UniProt:
Q97A09
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All DBs
Position
complement(1022523..1023365)
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AA seq
280 aa
AA seq
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MDDDLKSIASKYYIGGHISVSGGLHLAPERASIFGFRTFQFFSKNQMRWNSTPISEEEAL
RFISEVSSHSISSTMVHASYLINLASSSNELHQKSFNAFVEEIQRAERIDATFLTFHPGS
NGNKDEGIRKIKEAIEKVETHKVKLLVENTAGQGNVIGSTIYEIGQIIDGFDSSVGVCID
TCHAWAAGYDITNKYDEFIDELDSAIGLDRIYAFHLNDAMKDLGSNIDRHELIGRGKIGE
GLIKLISDVRLFGKPKIMETPYGEAKFEENLKYIRKKLGE
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgatcttaagagtatcgcctcgaaatactacatcggaggtcatatatctgtt
tcaggagggctacatctggcgccagagagggcatctatctttggcttcagaacttttcag
tttttttccaagaaccagatgagatggaattctaccccaataagtgaagaagaagctttg
cgttttatttctgaagtgtcatcacattcgatttcttcgactatggttcacgcatcgtat
ctcataaacctggcttccagttccaatgaacttcatcaaaagtcatttaatgcatttgtt
gaggagatacaaagagcagaaagaatcgatgcaacatttctcacgtttcatcctggatcc
aacggtaacaaagatgaagggataagaaaaatcaaggaagccattgagaaggttgaaaca
cataaggtaaaattgcttgtcgagaacacagcagggcagggaaacgtaataggcagcact
atttacgaaatcggtcaaataattgatggatttgattctagcgttggtgtgtgcatcgat
acttgccatgcatgggctgcaggatacgatataactaacaaatacgatgaattcattgat
gagctagacagtgctataggccttgacagaatctatgcttttcatcttaatgatgctatg
aaggatcttggaagcaatatagacaggcatgaacttatcggcaggggaaagattggagag
gggcttattaaattaatatccgatgtccgtcttttcggaaagccaaaaataatggaaaca
ccttacggggaagcaaagtttgaagaaaacctcaaatatatacggaaaaaattgggtgaa
taa
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