Thermoplasma volcanium: TVG1237894
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Entry
TVG1237894 CDS
T00042
Symbol
TVG1237894
Name
(GenBank) DNA-directed RNA polymerase B
KO
K13798
DNA-directed RNA polymerase subunit B [EC:
2.7.7.6
]
Organism
tvo
Thermoplasma volcanium
Pathway
tvo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tvo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
TVG1237894 (TVG1237894)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tvo03021
]
TVG1237894 (TVG1237894)
Enzymes [BR:
tvo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
TVG1237894 (TVG1237894)
Transcription machinery [BR:
tvo03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
TVG1237894 (TVG1237894)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
DUF4796_N
KBP_C
Motif
Other DBs
NCBI-ProteinID:
BAB60350
UniProt:
Q979F3
LinkDB
All DBs
Position
complement(1237894..1241481)
Genome browser
AA seq
1195 aa
AA seq
DB search
MREIVDAYFKKYGIVNHQLDSMNSFYASSDNPNSVMQQIVDETKVSDDADPGFFVLDPAK
TGGHDIRIYYGRVRENGHYVGEQTIFVGKPEIKEASGASNQITPNEARLRDLNYMAPVTL
KLRIVEDGIEKGSETIKVGDIPVMVRSKICTLAEGNLDQYIEKNNGPIGLSRREKLQYVG
EDPDDPGGYFIIGGSERVIVSLEDLAPNKIMVEWEDRYESKVEVAKVFSQRGGFRALTSM
EKGSDGTINVSIPSVAGTVPLVILMKALGLERDVDVHDAIASVPEMEPIIYANIEDSKNP
KILPPNGVNTTEDAISYLEKRFAAGQAKEFRDKKISQMLDHSLLPHLGDSASDRIRKAIY
LGRMARSLLELSLGIRKEDDKDHLANKRIKLAGDLMDELFRSAFQSVMKDLKYQLEKTYN
RKRGIKIRPAVRQDLLTQRILHAMSTGNWIGGRTGVSQLLDRVSNLSTISHLRRIISPLT
RTQPHFEARDLHPTQWGRICPNETPEGQNCGLVKNAALLINVTQGIDSETVMEILKGMDV
KEVLEESPNKGRVYLNGDFVGYHDDPRYLVRRLREERRAGRISDEINVRYDDNTNEVIVN
CDRGRLRRPLLVLKDGRTVITEDMIEKLRKDEYSFEDLVKVGALEWLDAEEEEDAYVAVY
AYNIPEKCPHCSSYLYRSMVDWSNPGSNNIILECGFCYNKFEVPSLITPEHTHLEIDPAM
ILGVVASIIPYPEHNSSPRITIASAMAKQSLGFAQSNVRIRPDTRGHLLHYPQVPLVRTR
VMEYTHYDRRPAGQNFVVAVLSYEGYNIQDALVINKAAIDRGLGRSTFFRTYSAEERRYP
GGQEDKFEIPTHDVIGARAEEYYKNLDESGIIYPEAYVEGSDVLIGKTSPPRFLEEGEER
LGPQRRRESSVTMRPNESGYVDNVFLTVSESNSRVVKIKVRSERIPELGDKFASRHGQKG
VIGLVVPQEDMPFTEEGIIPDLIFNPHSIPSRMTVGHILEMIGGKIASRTGKFIDGTIFS
GEPEKSLRDELVKYGFRKSGTEVMYDGITGRKFRADIFVGVIYYQKLHHMVAGKFHARSR
GPVQILTRQPTEGRSRQGGLRFGEMERDTLIAHGAAMVIKDRLLDQSDGTVLYVCGNPSC
GHIAIYDRRKGTLRCPVCGNTGNIYPIETSYAFKLMRDELISLGVVMRLMLGDMK
NT seq
3588 nt
NT seq
+upstream
nt +downstream
nt
gtgagagagattgttgatgcttattttaaaaaatatggaattgtaaatcatcagctcgat
tcaatgaattctttttatgcaagctctgataaccccaacagcgttatgcagcagatcgta
gacgagactaaggtatcggacgatgcagacccggggttttttgttttggatccagctaag
actggtgggcacgacataaggatatactatggccgtgtaagagaaaacgggcattatgtc
ggagaacaaacaatatttgtcggtaagcctgaaataaaagaagcttccggcgcttcgaac
cagataacgccaaatgaggcacgtcttagagacctaaattatatggctccggttacttta
aagctcagaatagttgaggacggtatagaaaagggaagcgaaaccataaaagttggagac
atacctgtgatggtaagatccaaaatatgcacgttggctgaaggcaatttagatcagtat
attgagaagaacaatggcccaattggcctttcgcgcagggaaaaactccaatatgttggt
gaagaccctgacgatccaggaggttactttataataggcggatctgagagagtgatcgtt
tccctggaagatctggctcccaacaagataatggttgaatgggaggatcgctatgagagt
aaagttgaggtcgccaaggtattctcacagcgtggaggtttccgtgccctaacatctatg
gaaaagggctcagacggaactataaatgtatcgattccaagcgtcgccggaacagtgcca
ctagttatacttatgaaagcattaggtcttgaacgtgatgtagacgtccacgatgcaata
gcatcagttcctgaaatggagccgatcatatacgccaacatagaggattctaaaaaccca
aagattttgccgccgaacggggtaaatacgactgaggacgctatatcatacttagaaaag
aggtttgctgcaggccaggcgaaggaatttagggacaagaagatatctcagatgcttgat
cattcacttcttccacatctgggcgattcagcatctgataggattagaaaggctatttat
cttggaaggatggcccgttctctacttgaactaagcctaggcataaggaaggaagacgac
aaagaccacctggcaaataagaggataaagcttgccggggaccttatggacgaactgttc
aggagtgcattccaatccgtgatgaaggacctaaaatatcagctagaaaaaacttacaac
aggaagagagggataaagattcggccagccgtaaggcaggatctgctgacgcaaagaata
ctgcatgctatgtcaacaggaaattggatcggtggccgtactggagtatcgcaattactt
gatagagtctctaatctaagtacaataagtcacctgcgcagaataatatctccgcttacc
aggacacagcctcacttcgaagctcgtgatctacaccctactcagtgggggaggatatgt
cccaacgaaactccagaaggccaaaactgcggccttgttaaaaacgcagcccttctcatc
aacgtaactcaaggaatagattctgaaactgtgatggagatcctgaaaggtatggacgtt
aaggaggtcctagaggaaagcccaaacaagggcagagtatatctcaatggagatttcgtg
ggttaccacgacgatccaaggtatcttgtccggagattaagagaagaacgtcgtgcaggg
cgtatatcggacgagatcaatgtaaggtatgatgataacacaaatgaggtcattgttaac
tgcgataggggcaggttgagaaggccgcttcttgttcttaaggacggccgtaccgtgata
accgaagacatgatagagaagctgaggaaggacgagtacagcttcgaagaccttgttaag
gttggtgcattagaatggcttgatgcagaagaagaggaagatgcatacgtagcagtgtat
gcctataatatacccgaaaaatgcccacactgctcgagttacctatacagatctatggtt
gactggtctaacccaggctccaataatattatccttgagtgcggattctgttacaacaaa
ttcgaagtcccatcgcttataactccggagcacacacatttagaaatagacccagcaatg
atacttggtgttgtagcatcgataattccgtatcctgagcataattcttcaccaagaata
actattgcatctgcgatggcaaagcagtctcttggctttgctcaatctaatgtgaggata
agacccgatacgcgaggacacctgcttcactatcctcaggttccgcttgtacgtactcgt
gtgatggaatacacgcattacgacagaaggccagcagggcagaactttgtagtggccgtt
ctatcctatgaaggttacaacatacaggatgcactggttataaataaggctgcaatagac
cgtggactaggaagaagcacattcttcaggacttattcagctgaagagcgaagatacccc
ggcggtcaggaagataagttcgaaattcccactcacgacgtaataggggccagggcggaa
gagtattataagaacctcgacgaaagtggaataatatacccagaagcatatgtagaaggc
tctgacgtcctcataggaaagacctcaccgccgagattcctagaggaaggagaggaaagg
ctcggtccgcagagaagaagggagtcttctgttacgatgagaccaaacgaaagcggttat
gtagacaacgtttttctcacagtttcagagagtaatagcagggtcgttaaaataaaggta
aggagcgaaaggattcctgaactaggggataaatttgcctctaggcacggtcagaaaggc
gtcattggattagtagttccgcaggaagatatgccgtttaccgaggaaggtataataccg
gatcttatattcaacccgcactctataccgtcaaggatgaccgttggccatatacttgag
atgattggagggaaaatagcctcaaggacgggcaagttcatcgatggtacaattttcagc
ggggaaccagaaaagagcctcagggacgaacttgtcaaatatggttttaggaagtctgga
acagaggttatgtacgacggaataaccggacgtaagttcagggccgacatatttgtgggt
gtaatatattaccagaagttgcaccacatggtagcaggtaaattccacgccaggtctagg
gggcctgtccaaatacttaccaggcagccaaccgaaggccgatccaggcagggtggttta
aggttcggagaaatggaaagagatacgttaattgcgcatggggctgcaatggtaataaag
gatcgcttgctagatcagagcgatggcaccgtactttacgtgtgtggtaacccttcatgt
gggcatatagcaatatacgacaggagaaagggaactcttcggtgtccagtttgcggcaat
acaggtaacatctatccaatagagaccagttacgcctttaagctcatgagggatgagctg
atatctctcggtgttgttatgcgtcttatgttgggtgatatgaaatga
DBGET
integrated database retrieval system
