Thermoplasma volcanium: TVG1368057
Help
Entry
TVG1368057 CDS
T00042
Symbol
TVG1368057
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
tvo
Thermoplasma volcanium
Pathway
tvo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tvo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TVG1368057 (TVG1368057)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tvo03019
]
TVG1368057 (TVG1368057)
03009 Ribosome biogenesis [BR:
tvo03009
]
TVG1368057 (TVG1368057)
Enzymes [BR:
tvo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
TVG1368057 (TVG1368057)
Messenger RNA biogenesis [BR:
tvo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
TVG1368057 (TVG1368057)
Ribosome biogenesis [BR:
tvo03009
]
Prokaryotic type
rRNA helicases
TVG1368057 (TVG1368057)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Flavi_DEAD
CMS1
HypF_C_2
LIS_MGM1
DEDD_Tnp_IS110
Motif
Other DBs
NCBI-ProteinID:
BAB60468
UniProt:
Q978T9
LinkDB
All DBs
Position
complement(1368057..1369178)
Genome browser
AA seq
373 aa
AA seq
DB search
MKGFEEFNLRNELIESIRGTGYSEPTEVQSMAIPIALAGSDLVVRSKTGSGKTAAYLIPI
INNTAKEKGIRALILLPTRELAVQVAKVSEALGKRSGIRTVVVYGGVSINKQIELILRGA
NIIVGTPGRTLDLIDRGILNFDKVSYFVLDEADEMLDMGFIEDIKKIINVLPVERQSFLF
SATIPSEIIELAKGFMHNEEILFLSKDEVTVNGIDHNYAVSRRERKLRTLFSYIDKYKPE
KSIIFSRTKAGANMIYEALINHGQDAVIMHGDLTQAQREKALYRFKNFGRFLVATNVAAR
GLDIGGISDIINYDVPDDPRVYVHRVGRTARMGAAGRAFTIVEDREIGSIDMIRHEARVK
MKEIHLETTRKNF
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgaaagggttcgaagaatttaatttaaggaatgaattgattgaaagtataaggggcacg
ggttatagtgagccgactgaggttcagtctatggcaataccgattgctcttgcaggctct
gacttagttgttaggtcaaagacaggctctggaaagacggctgcttatttgatacctata
ataaacaacacagcaaaggaaaagggaataagagctcttattcttctaccaacaagggag
ctggcggttcaagttgcaaaggtttctgaggctttaggcaaaagatctggaataaggact
gttgttgtatacggtggagtatcaatcaataaacaaattgaactgatattgcgcggcgct
aatataatagtcggtacacctggtagaactcttgatcttatagatagggggatcttaaat
tttgataaggtctcctattttgttcttgacgaagctgatgaaatgcttgacatgggattt
atagaggatattaagaagataataaatgtactcccagttgaaaggcagtcatttcttttc
tctgcaacgataccatcagaaataatcgaactggcaaagggctttatgcataatgaagaa
atattatttttatcaaaggatgaggtaacggtaaatggcatagatcataattacgcagta
agcaggagggaaagaaagctccgtacactattctcctacatcgataaatacaagcctgaa
aagtcaataatattctctagaactaaggcaggcgccaacatgatatatgaagcgctgatt
aatcacgggcaagatgccgtaataatgcacggagacttgactcaagcccagagagaaaaa
gcgctttacaggttcaaaaactttggcaggtttctcgttgccactaacgttgccgcaaga
ggcttagatattggtggaatttcagatattataaattatgatgtcccagacgaccctagg
gtttacgtacatcgcgttggcaggactgctagaatgggtgcagcaggtagagcgtttact
atagtcgaagacagggagattggcagtatagacatgattagacatgaagctagggtaaaa
atgaaggaaatacatcttgaaacaactagaaaaaatttttag
DBGET
integrated database retrieval system
