Trichosurus vulpecula (common brushtail): 118828132
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Entry
118828132 CDS
T10126
Symbol
CPSF2
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 2
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
tvp Trichosurus vulpecula (common brushtail)
Pathway
tvp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
118828132 (CPSF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tvp03019
]
118828132 (CPSF2)
Messenger RNA biogenesis [BR:
tvp03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
118828132 (CPSF2)
U7-dependent histone pre-mRNA processing factors
118828132 (CPSF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
RMMBL
Lactamase_B
Anti-Pycsar_Apyc1
Lactamase_B_2
Motif
Other DBs
NCBI-GeneID:
118828132
NCBI-ProteinID:
XP_036590447
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Position
8:complement(256498509..256553488)
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AA seq
782 aa
AA seq
DB search
MTSIIKLTTLSGVQEESALCYLLQVDEFRFLLDCGWDEHFSMDIIDSLRKHVHQVDAVLL
SHPDPLHLGALPYAVGKLGLNCAIYATIPVYKMGQMFMYDLYQSRHNTEDFTLFTLDDVD
AAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEIVYAVDFNHKR
EIHLNGCSLEMLSRPSLLITDSFNATYVQPRRKQRDEQLLTNVLETLRGDGNVLIAVDTA
GRVLELAQLLDQIWRTKDAGLGVYSLALLNNVSYNVVEFSKSQVEWMSDKLMRCFEDKRN
NPFQFRHLSLCHGLSDLARVPSPKVVLASQPDLECGFSRDLFIQWCQDSKNSIILTYRTT
PGTLARFLIDNPSEKITEIELRKRVKLEGKELEEYLEKEKLKKEAAKKLEQSKEADIDSS
DESDGEEDIDQPSAHKTKHDLMMKGEGSRKGSFFKQAKKSYPMFPAPEERIKWDEYGEII
KPEDFLVPELQATEEEKSKLESGLTNGDEPMDQDLSDVPTKCISATESIEIKARVTYIDY
EGRSDGDSIKKIINQMKPRQLIIVHGPPEASQDLAECCRAFGGKDIKVYMPKLHETVDAT
SETHIYQVRLKDSLVSSLQFCKAKDAELAWIDGVLDMRVSKVDTGVILEEGELKDDGEDS
EMQVDTPSDASVIAQQKAMKSLFGDDDKETGEESEIIPTLEPLPPHEVPGHQSVFMNEPR
LSDFKQVLLREGIQAEFVGGVLVCNNLVAVRRTETGRIGLEGCLCQDFYRIRDLLYEQYA
IV
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgacatctatcatcaaactaactaccctctcgggggtgcaagaagaatctgcactttgc
tatctgcttcaggttgatgagtttcgattcttattggactgtggctgggatgagcacttt
tcaatggatatcatcgattcccttaggaaacatgttcaccaggtagatgcagtactgctc
tctcatcctgatcctctccatctcggtgccctcccatatgctgttggaaaactgggtttg
aattgtgctatctatgcaaccattcctgtttataaaatgggacaaatgttcatgtatgat
ctttatcagtctcgtcataatacagaggattttacactttttacgttggatgatgtggat
gcagcttttgataaaatacagcaactcaagttctctcaaattgtgaatctgaaaggcaaa
gggcatggtttgtccatcacacctctgccagctggtcacatgataggaggaacaatatgg
aaaatagtcaaagatggagaagaagaaatcgtttatgctgttgacttcaaccacaagagg
gagattcacttaaatggatgttccctggaaatgttaagcagaccttcattgcttatcaca
gattcctttaatgctacttatgtgcagcccagacgaaaacaaagggatgaacagctactc
acaaatgtcctggaaacacttcgaggtgatgggaacgtgttaatagctgtggacacggct
ggcagagttttggaacttgcccaacttcttgatcagatttggagaactaaagatgcagga
ctgggggtgtactcactagcactcctgaacaacgtcagctacaatgtagtggagttttct
aaatcccaggtagaatggatgagtgataaattgatgagatgttttgaagacaaaagaaat
aatccatttcaatttcgccatctttctttatgtcatggtctttctgatctggctcgtgtg
cctagccccaaagttgtacttgccagccagcctgatttggaatgtgggttttcaagagat
ctctttattcagtggtgccaggactctaaaaattcaatcatcctaacttatagaactacc
cctggaacattagcacgtttcctaatagataacccttctgagaaaatcacggaaatagag
ttgagaaaacgtgtgaaacttgaaggaaaagaacttgaagagtatctagagaaagagaaa
ctgaagaaggaagctgctaaaaagctagaacaatcaaaggaggcagatatagattctagt
gatgagagtgatggtgaagaagatattgaccaaccgtcagcacacaaaaccaagcatgat
ttgatgatgaaaggtgaaggtagccgaaaaggaagtttcttcaaacaggctaaaaagtct
tatcctatgtttcctgccccagaagaaagaattaaatgggatgagtatggagagattatc
aaaccagaagatttcttagtgcctgagcttcaagctactgaagaagaaaaaagcaaatta
gaatctggcttgacaaacggagatgaacctatggatcaagatttatcagatgttcctacc
aagtgcatttctgcaacagaatcgattgaaatcaaagccagagttacttatatagactat
gaaggacgttcagatggtgactccattaaaaaaataattaatcagatgaaaccacggcag
ttgattatcgtgcatggaccaccagaggccagtcaagacctagcagaatgttgccgagct
tttggtggaaaagatattaaagtgtatatgccaaagctgcatgaaacagtagatgccacc
agtgaaacgcatatctatcaggtgaggttaaaggattcacttgtcagctctcttcaattc
tgtaaagcaaaagatgctgaactagcttggatagatggtgtcctagacatgcgagtttcc
aaagtagacacaggcgttattttagaggaaggagaactgaaggatgatggagaagactca
gagatgcaggtggatactccttcagatgctagtgtcatagcccagcaaaaagctatgaag
agcctgtttggagatgatgacaaagaaacaggtgaagagagtgaaattattcccactttg
gaacctttgccacctcatgaggttcctggacaccagtcagtgtttatgaatgagccaaga
ctatctgattttaaacaagttctattgcgagagggaatccaggctgagtttgtaggaggt
gtacttgtttgcaataatcttgtggctgtccgtagaactgaaactggacgcattggactt
gaaggctgcctttgtcaggatttttataggataagagaccttttatatgaacagtatgcg
attgtgtag
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