Trichosurus vulpecula (common brushtail): 118828182
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Entry
118828182 CDS
T10126
Symbol
CHD8
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 8
KO
K04494
chromodomain helicase DNA binding protein 8 [EC:5.6.2.-]
Organism
tvp Trichosurus vulpecula (common brushtail)
Pathway
tvp04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
118828182 (CHD8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tvp03036
]
118828182 (CHD8)
Chromosome and associated proteins [BR:
tvp03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
118828182 (CHD8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
Chromo
BRK
ResIII
DEAD
HDA2-3
HTH_Hrp3
Myb_DNA-bind_7
MUN
Motif
Other DBs
NCBI-GeneID:
118828182
NCBI-ProteinID:
XP_036590519
LinkDB
All DBs
Position
8:179575123..179638600
Genome browser
AA seq
2592 aa
AA seq
DB search
MADPIMDLFDDPNLFGLDSLTDDSFNQVTRDPIEEALGLPGTLDSLDQMNQDGGSSDLGS
SSSSGLPPPTEETPPTEPPKESATPAPESLTLHDYTTPPVGQEQPNQTILQTPPPPTGLL
QVSKGQEILSQGNPFMGVSATAVSSSSGAGQPPQTAPKIVILKAPPGTSVTGAHVAQIQA
QAITSTAQPLVAGTANGGKVTFTKVLTGTPLRPGVSIVSGNAVLATKVTGGQATVQRIVQ
PSRPVKQLVLQPVKSSTTTGNPGTGATPLKPAVTLTSAPTQGESKRITLVLQQPQSGGPQ
GHRHVVLGSLPGKIVLQGNQLAALTQAKNAQGQPAKVVTIQLQVQQPQQKIQIVQQPPSS
QQQQQQPPSAQPVTLSSVQPAQIMGPGQSPGQRLTVPLKVVLQPQAGSSQGASSGLSVVK
VLSASEVAALSSPAAPAPHTGGKAGVEENRRLEHQKKQEKANRIVAEAIARARARGEQNI
PRVLNEDELPSVRPEEEGEKKRRKKNTGERLKEEKPKKSKASGTSKSKGRSKLNTITPVV
SKKRKRNTSSDNSDVEVMPAQSPREEEESSIQKRRSNRQVKRKKYTEDLDIKITDDEEEE
EVDVTGPVKPEPILPEPVQEPDGETLPSMQFFVENPSEEDAAIVDKVLSMRVVKKELPSG
QYTEAEEFFVKYKNYSYLHCEWATISQLEKDKRIHQKLKRFKTKMAQMRHFFHEDEEPFN
PDYVEVDRILDESHSIDKDNGEPVIYYLVKWCSLPYEDSTWELKEDVDEGKVREFKRIQS
RHPELKRVNRPQASAWKKLELSHEYKNRNQLREYQLEGVNWLLFNWYNRQNCILADEMGL
GKTIQSIAFLQEEYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYHGSLASRQMIQ
QYEMYCKDSRGRLIPGAYKFDALITTFEMILSDCPELREIEWRCVIIDEAHRLKNRNCKL
LDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLKDFGDLKTEEQVQK
LQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLSKGAGHTN
MPNLLNTMMELRKCCNHPYLINGAEEKILTEFREACHIIPHDFHLQAMVRSAGKLVLIDK
LLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDS
DRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITR
NSYEREMFDKASLKLGLDKAVLQSMSGRDGNITGIQQFSKKEIEDLLRKGAYAAIMEEDD
EGSKFCEEDIDQILLRRTTTITIESEGKGSTFAKASFVASENRTDISLDDPNFWQKWAKK
ADLDMDLLNSKNNLVIDTPRVRKQTRHFSTLKDDDLVEFSDLESEDDERPRSRRHDRHHA
YGRTDCFRVEKHLLVYGWGRWRDILSHGRFKRRMTERDVETICRAILVYCLLHYRGDENI
KGFIWDLISPAENGKTKELQNHSGLSIPVPRGRKGKKVKSQSTFDIHKADWIRKYNPDTL
FQDESYKKHLKHQCNKVLLRVRMLYYLRQEVIGDQAEKVLGGAIASEIDIWFPVVDQLEV
PTNWWDSEADKSLLIGVFKHGYEKYNTMRADPALCFLEKAGRPDDKAIAAEHRVLDNFSD
IVEGVDFDKDCEDPEYKPLQGPPKDQEDEGDPLMMMDEEISVIDSDEVQVTQQPGHLFWP
PGSALTARLRRLVTAYQRSYKREQMKIEAAERGDRRRRRCEAAFKLKEIARREKQQRWTR
REESDFYRVVSTFGVEFDPDTLHFHWGRFRTFARLDKKTDESLTKYFHGFVAMCRQVCRL
PPAAGDESPDPTLFIEPITEERASRTLFRIELLRRLREQVLCHPLLEDRLALCQPPGPEL
PKWWEPVRHDGELLRGAARHGVSQTDCNIMQDPDFSFLAARMNYMQSQQAGAPAPSLSRC
STPLLHQQYASSTASPLPLRPDAPTEKLPEEAVTRVPSLESLALKLEHEVVARNRPTPQD
YDLRVASSDPTTMASQSVPPVKLEEEDDSDSELDLSKLSPSSSSSSSSSSSSSSTEDSED
EKEEKLSADQSCSKLYDEESLMSLTMSQDGFPNEDGEQMTPELLLLQERQRASEWPKDRV
LINRIDLVCQAVLSGKWPSNRRNQEMVTGGSLGQGNHLLDSPLLAPGEYGDSPVPTPRSS
SAASMAEEEVAAVSTAAAQFTKLRRGMDEKEFTVQIKDEEGLKLTFQKHKLMANGVLGDG
HPLFHKKKGSRKKLVELEVECMEEPHHLDVDLEARIPVINKVDGTLLVGEDAPRRAELEM
WLQGHPEFAVDPRFLAYMEDHRKQKWLRCKKPNKAEMGCLGMEQVQTVNSRNGKKGHLPD
TMFNRVLPGPVAPDNSKKRARRVRPDLSKMVALMQGGSSGPLALHSNFQHGSSGLQPVSS
LGHSSATSTSLPFVPFVMGGTVSSPHVDSSTMLHHQHHHHHHHHHHHHHPGLRASSYPST
PATTTSAGTALRLPPLQPEEEEEEEEEEEEEEDEEEEDDDLSQGYDSSERDFSLIDDPMM
PANSDSSEDADD
NT seq
7779 nt
NT seq
+upstream
nt +downstream
nt
atggcagaccccatcatggacctttttgatgatcccaatttatttggcctggactctcta
actgatgacagcttcaaccaagtcacacgagaccccatagaagaggcccttggactgcca
ggtaccctggactccttagatcagatgaatcaggatggtggaagcagtgacttgggaagt
tcatcatcaagtggcctgccccctccaacagaggaaacccctcctacagaacctcccaaa
gaatcagcaactccagccccagagtcactgaccttgcatgactataccactccaccagtg
ggtcaggaacaacccaaccaaactatcttacagacaccaccaccaccaacaggacttctt
caggtctccaagggccaggaaatcctgagccagggaaatccttttatgggtgtctctgcc
acagctgtctcctccagcagtggtgcagggcaaccccctcagacagcccccaagattgtc
atcctcaaggccccacctggtacctcagtcacaggtgctcatgtggcacagatccaagcc
caggccatcaccagcacagcacagcctttagtggctggcacagccaatggtggtaaagtt
acttttaccaaggtgctaactggtactccacttcgaccaggagtctccattgtttctggc
aatgcagtcttggccactaaggtcactggaggccaggctacagtgcagcgcattgttcaa
cccagccggccagtaaagcagctggtcctgcagccggttaagagttctaccacaactgga
aaccccgggactggagcaacaccactgaagcctgctgtcacactgacctcagctcccact
cagggtgaatcaaagcgcatcactctggttctccagcagcctcagtcaggggggcctcaa
ggccatcggcatgtcgtgctagggagtctgccaggcaagattgtgttgcagggcaaccag
ctggcagccctgactcaggccaagaatgcccaggggcagcccgccaaagtggtgactatc
cagctgcaggtgcagcagccgcagcaaaaaattcagattgtacagcaaccaccctcgtcc
cagcagcagcaacagcagccaccctcagcccagccagtgaccctttcttcggtgcagcca
gcccagattatgggaccaggacaaagcccaggccaaagacttacagtaccactcaaagtg
gtacttcagccacaggctggctcttcccaaggggcctcttcgggcctctcagtggttaaa
gtgttgagtgccagtgaggtggcagctctgtcttctccagcagcccctgctcctcacact
gggggcaaagctggagtggaagaaaatcgaaggctagagcaccagaagaaacaagagaaa
gctaataggatagtggcagaggcaattgccagagctcgggcccgaggtgagcaaaatatc
ccacgagtcttaaatgaagatgagttgcccagtgtccgacctgaggaagaaggtgagaag
aaacgcaggaagaagaacactggagagagactcaaggaggagaagccaaaaaagagcaaa
gcgtctggtacctccaagtctaagggcaggagtaagctaaacaccatcacccctgtggtg
agtaagaaaaggaaacggaacacctcatctgataattctgatgtggaagtcatgcctgca
caatcacccagggaggaggaagagagcagcattcagaagagacgttcaaaccgacaagtg
aagagaaaaaaatacacagaggatttggacattaagatcacagatgatgaggaggaagaa
gaggtggatgtgactggtccagtaaagcctgagcccattctgcctgagccagttcaggag
cctgatggcgagacattgccatccatgcagttctttgtggagaaccccagtgaagaagat
gcagccattgtggacaaagtgctttctatgcgggtggtgaaaaaggagcttccctctgga
cagtacacagaagcagaggaattttttgtcaagtataagaactattcttatctgcactgt
gaatgggccactatctctcagttagagaaagacaagaggatccatcaaaaacttaagcga
ttcaaaaccaaaatggctcaaatgagacacttcttccatgaggatgaagagcccttcaac
ccagactatgtggaagtggacaggatattggatgagtctcacagcattgacaaagacaat
ggggagcctgtaatttactacctggtcaaatggtgttctctaccctatgaggatagtact
tgggaactgaaagaagatgtggatgagggcaaagtccgggagtttaagcggatccagtca
aggcatccagagctcaaaagggtgaatcgtcctcaggcaagtgcctggaagaaattagag
ttatcacatgagtacaaaaaccggaatcaactacgagaataccagctagaaggggtcaac
tggctactttttaactggtacaacaggcagaactgtatcctggctgatgaaatggggctg
ggcaaaacaattcagtccattgccttcctacaagaggaatataatgtaggcatccatggt
cccttcctggtcattgccccactctctacaattaccaactgggagagagagttcaacaca
tggacagagatgaacaccattgtgtaccacggcagtctggccagccgacaaatgatccag
cagtatgagatgtactgcaaagattcacggggacggcttatccctggggcatataagttt
gatgccttgatcaccacttttgagatgatcttgtcagactgccctgagctacgggagatt
gaatggcgttgtgtcattattgatgaggctcatcgactcaagaatcggaattgcaagctg
cttgatagtctcaagcacatggacctggagcataaggtgctgctcacagggacacccctg
caaaacactgtggaagaactgtttagcttgttgcacttcttggaaccttcacagtttcct
tcagaatcagagttcctcaaggactttggtgatctcaagacagaagagcaggtccagaag
ctacaggctattctgaagccaatgatgttgagaaggctcaaagaagatgtggaaaaaaac
ctagctcccaaacaggagacaatcattgaagtggaattaaccaacatccaaaagaagtat
tatcgtgctatcttggaaaaaaacttctccttcctttccaaaggagcaggtcacacaaac
atgcccaacctacttaacacaatgatggaactgcgtaaatgttgtaatcatccatatctc
atcaatggcgcagaggaaaaaatcctaacagaatttcgggaggcctgccatatcatcccc
catgacttccatcttcaggccatggtccgctcagctggtaagctggttctcattgacaag
ctacttccaaaactcaaggctggtggccataaggtgctgatcttctcccagatggttcgc
tgcctggatatcctggaggattacttgatccagagaaggtacttatatgagcgtattgat
ggacgtgtgagaggtaacctacgtcaggctgccattgaccgctttagtaaacctgattct
gaccgatttgtcttcttactctgtacccgggctggtggccttggtatcaaccttacagct
gccgatacttgcatcatctttgattcagactggaacccacagaatgatttacaggcccag
gcacgttgtcaccgaatagggcaaagcaaagctgtgaaagtttaccgcctcatcactcga
aattcttatgagagggagatgtttgataaggccagcctcaagttgggactggataaagca
gtacttcagtccatgagtggtcgggatggcaacatcactgggattcagcagttctccaag
aaggagattgaggacctcttaaggaaaggtgcttatgcagctattatggaagaagatgat
gagggttccaagttttgtgaggaagatattgaccaaattttactaaggcgtaccactacc
atcaccattgaatccgaggggaaagggtccacctttgctaaggctagctttgttgcttct
gaaaatagaacagatatttctctagatgatcctaacttctggcaaaagtgggctaaaaaa
gctgacctagatatggatttactcaacagcaagaataatttggtgattgatacaccacga
gtgcgtaagcagacacggcactttagcacgctgaaagatgatgacctggtggaattctct
gatttggaaagtgaggatgatgagcggcctcgatcccgccggcatgacaggcatcatgcc
tatggacgtactgattgcttccgggtggaaaagcacctcttggtgtatggctggggtcgc
tggcgagatattctgtcccatgggcggttcaaacgacgaatgactgaacgggatgtggag
acaatttgccgtgccatccttgtgtactgtcttctgcactaccgtggggatgaaaacatc
aaaggcttcatttgggacctgatcagccccgcagagaatggcaaaacaaaagaacttcag
aaccattcaggtttgtctatcccagtgccccggggacgcaaagggaagaaagtgaagtcc
caaagtacctttgatatccacaaagcagactggatccggaaatataaccctgataccctc
ttccaggatgaaagttataagaaacacttgaaacatcagtgtaacaaggtgttgttgcga
gtacgcatgttatattacctgcggcaagaggttattggtgatcaggcggagaaggtgttg
ggaggtgccattgctagtgagattgatatatggttcccagtggtggatcagttggaggtc
ccaacaaactggtgggatagtgaagctgacaagtctttgctcataggagtctttaaacac
ggctacgagaagtataataccatgagagcagatccagctttatgttttctggaaaaggct
ggccggccagatgacaaggccattgcagcagagcatcgagtgttggacaatttttctgat
attgtagaaggggttgactttgataaggactgtgaagatcctgaatacaagccacttcaa
ggccccccaaaggaccaagaggatgagggtgaccctttgatgatgatggatgaggagatt
tctgtgattgacagcgatgaagtccaggtgacccagcagccaggtcatctcttctggcct
ccaggctcagccctgacggccaggctgcggcgtctggttactgcctatcagcgtagctac
aagcgagaacagatgaagatagaggcagcagagcgtggggaccggcggcgacgacgttgt
gaggcagccttcaaactgaaagaaatcgcacggcgagagaagcagcagcgatggacaagg
cgtgaggaatcagatttctaccgagtggtgtcaacctttggagtggagtttgatcctgat
accctacactttcactggggtcgattccgtacatttgcccgtctggacaaaaaaacagat
gaaagccttaccaagtacttccatggttttgtggccatgtgccgacaggtgtgccgtcta
ccccctgctgctggagatgaatccccagaccccactctgttcattgaacccatcacagag
gagagggcctcacgcactcttttccgaattgaattgcttcggcgattacgggaacaagta
ctatgccatccattattagaggaccgattggctttgtgccaacccccaggccctgaactg
cccaaatggtgggaaccagttcgacatgatggggaacttctccgaggggcagctcgccat
ggcgtgagccaaacagactgcaatattatgcaggacccagacttctctttcctggctgct
cgtatgaattacatgcagagccaacaggcaggggcaccagctccatccctgtcacgctgt
tctaccccactgctgcaccaacagtatgcctcgagcactgcctcacctctgcccctgcgt
ccagatgctcctactgaaaagttaccagaggaggcagtaacccgtgtccccagcctggag
agtctggccttaaaactagagcatgaggtggtggccagaaacaggccaaccccacaagac
tatgacctacgggtagcctcctctgatcctaccaccatggcttcccaaagtgttccacca
gtcaaactggaggaagaggatgattcggactctgaactggacttaagcaaactgtcacca
tcctcctcctcttcttcctcctcatccagctccagctctagcactgaagacagtgaagat
gaaaaggaagagaagctgagtgctgaccagtcttgctccaagctttatgatgaagagagt
ctcatgtccctcactatgtcccaggatggattccccaatgaagatggagagcaaatgact
cctgaactgttgctgcttcaggagaggcagagagcttctgaatggcccaaggatcgtgtc
ctgataaaccgcattgacctcgtctgccaggctgtcctctcagggaaatggccctccaac
cgccgaaaccaagaaatggtaactggagggtcactgggacaaggcaaccatctgctggat
agtccactgctggctccaggggaatatggtgactcacctgtgcccacacctcgaagtagt
agtgcagcttcaatggcagaagaggaggtggctgctgtcagtactgctgcagcccaattc
accaaacttcgacggggcatggatgagaaggaatttacagtccagatcaaagatgaagaa
ggattgaaattgacgttccagaagcacaagttgatggccaatggagtgctaggagatgga
catccactattccataagaagaaggggagccgaaagaagctagtggagctggaagtggag
tgtatggaggagcctcaccaccttgatgtagacttggaagcccggattcctgtcatcaat
aaggttgatggcactttgctggtgggtgaggatgcccctcgtcgggctgagctggaaatg
tggttacagggtcatccagaatttgctgttgatcctcggttcctagcttatatggaagat
caccgaaaacagaagtggctcagatgtaaaaaacccaataaggcagagatgggttgtttg
ggaatggaacaagtgcaaacagtcaattcccggaatggaaagaagggtcatctccctgac
actatgttcaaccgggtcttaccaggccccgttgcaccagacaatagcaagaagcgggcc
cgcagggtacggccagacctctccaaaatggtggccctgatgcagggtgggagctctgga
cccctggctttgcatagtaacttccagcatggtagcagtggcctacaacctgtgtcatca
ctaggtcacagcagtgccacctctacatctttgccttttgtgccatttgtgatgggaggt
acagtctcatcccctcatgtagactccagcacaatgcttcatcaccaacatcaccaccac
caccatcatcaccaccatcaccaccacccaggcctgagagcttctagctacccttccacg
ccagctaccaccacctctgcaggcacagccctcaggttgccaccactgcaacctgaggag
gaagaggaggaggaagaggaagaagaggaagaagaagatgaggaggaagaagatgatgat
ttatctcagggctatgatagctcagaaagggacttctcactcattgatgaccctatgatg
ccagccaactcggactctagtgaagatgctgatgactga
DBGET
integrated database retrieval system
