Trichosurus vulpecula (common brushtail): 118828217
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Entry
118828217 CDS
T10126
Symbol
DDX21
Name
(RefSeq) nucleolar RNA helicase 2
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
tvp Trichosurus vulpecula (common brushtail)
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tvp03009
]
118828217 (DDX21)
03036 Chromosome and associated proteins [BR:
tvp03036
]
118828217 (DDX21)
Enzymes [BR:
tvp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
118828217 (DDX21)
Ribosome biogenesis [BR:
tvp03009
]
Eukaryotic type
Pre-60S particles
Helicases
118828217 (DDX21)
Chromosome and associated proteins [BR:
tvp03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
118828217 (DDX21)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
ResIII
CMS1
Cas3-like_C_2
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
118828217
NCBI-ProteinID:
XP_036590573
LinkDB
All DBs
Position
8:31965381..31985341
Genome browser
AA seq
860 aa
AA seq
DB search
MPGKLLSEAEVESEASMEATEQTRKHKQKKDKKEKSKNERLEKKGKVETEELDSPKPKKI
KREELPEEVISPKPKKAKKKEHPPEDEEDTSPKPKKAKKSKEGSVEEPKRLKEKEEVSSN
EVCSKAKKSKEKEELSEKPKKAKKKEGEVNGDTGETRPKLQKASVGNGVPHSKRASDSDS
AESSSEESDSEAEQGNDLRKGVESHALSSKGVKSQLQAGLTKQFEGGEDDDDEEELEKPK
KDEKKGNEKDSKSEDTEELSEEQKEGAFSNFPISEETIQLLKARGVTYLFPIQAKTFHHV
SSGKDLIAQARTGTGKTFSFAIPLIEKLQGDSQPRGRGRAPKILVLAPTRELSIQVSKDF
SDITKKLTVACFYGGTPYNGQIDLIRRGIDILVGTPGRIKDHLQNGRLDLTKVQHVVLDE
VDQMLDMGFAEQVEEILTVAYKKDSEDNPQTLLFSATCPHWVYDVAKKYMKSTYEQVDLI
GKKTQKAAVTVEHLAINCHWSQRAAVIGDVIQVYSGSHGRTIIFCETKKEAQELSLNESI
KQDAQSLHGDIPQKQREITLQGFRNGKFGVLVATNVAARGLDIPEVDLVIQSSPPKDVES
YIHRSGRTGRAGRTGICICFYQKKEQHQLAQVERQAGITFKRVGVPSASEIIKASSKDAI
RFLDSVPPAAINNFRQTAQKLIDEKGAVEALAAALAHISGATTVEQRSLINSDVGFVTMV
LQCSIEMHNIGYAWRGLKEQLGEEIDDKVTRMTFLKGKMGVCFDVPAAEAKTFQEQWQDS
RRWQLSVATERPELEQQPDEGRGFSSFRNQRQGGGGRGGGRGSGRGGGRGGRSGGGSFNR
NDKFQNRGQKRSFQRAFSHR
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atgccgggtaagcttctgtcagaggccgaagtcgagtcggaggcgtccatggaggcgacg
gagcagacgcggaagcacaagcaaaagaaagataaaaaagagaaatcaaaaaatgagaga
ctggaaaagaaaggcaaggtagagactgaggagcttgattcccctaagcccaagaagatt
aaaagggaggagcttccagaagaagtcatttctccaaagcccaaaaaagccaagaagaaa
gaacatcccccagaggatgaggaagatacttcccctaagcccaaaaaggccaaaaagagc
aaggaggggtctgtggaggagcccaaaaggctgaaagagaaggaggaggtctctagcaat
gaggtctgctctaaggccaaaaagagcaaagagaaagaagagctttctgagaaacccaag
aaggccaagaagaaggagggagaagtaaatggagacacaggagagacaaggccaaagctg
cagaaggcatcagtgggtaatggagtgccccactccaagcgtgcttctgattctgattca
gcggagtcatccagtgaagaaagtgacagcgaggctgagcagggaaatgatcttcgtaaa
ggagtagaaagccatgctcttagttctaaaggagtaaaatcccagttgcaagctggactg
acaaaacagtttgaaggaggggaagatgatgatgatgaagaagagttggagaaacccaaa
aaagatgaaaagaagggaaatgagaaagattccaaatctgaagacactgaggagttatct
gaagagcagaaagaaggagctttctctaatttccccatctctgaagagacgattcaactc
ctcaaagcccgtggagtgacctacctgtttcctatacaagcgaagacgtttcatcatgta
tctagtgggaaagatttaatagcccaagcccggacagggacggggaagacattctccttt
gccatccccttaattgaaaaacttcagggagactctcagccccgaggaagaggccgtgca
ccaaagatcctggtcctggccccaacgcgggagctgtcgatccaagtcagcaaagacttc
agcgatatcaccaagaagttgacggtggcttgtttctatggaggaactccctataacggc
cagattgatctcattcggagaggaattgatatcttggtgggcactccgggtcgcatcaaa
gaccatctgcagaatggccgacttgacctcaccaaggtgcagcatgttgtgctggacgag
gtggaccagatgctggacatgggctttgctgagcaggtggaggaaattttaaccgtggct
tataagaaagattcagaagacaacccccagacgttgcttttttctgcgacttgtcctcac
tgggtctacgatgttgctaagaaatacatgaagtctacttatgagcaagttgacctcatt
gggaagaagacgcagaaggccgccgtcaccgtggagcatttggccatcaattgtcactgg
tctcagagggcagcagtcatcggcgatgtcatccaggtctacagtgggagtcatgggcgg
accattatcttctgtgagacaaagaaggaggctcaggagctctccctgaatgaatcaata
aagcaggatgcccagtcgttgcacggagacattccacagaaacaaagggaaatcaccctt
cagggcttccggaatggtaaatttggtgtcctggtggcgactaacgtggcggctcggggc
ttggacatccctgaggtggacctggttatacagagctctcctccaaaggatgtggagtcc
tacattcatcgttcagggcggacgggtcgagctggacggaccgggatctgcatttgcttt
tatcagaagaaggagcaacaccagctagcgcaggtggaacggcaggcggggatcacattc
aaacgtgtgggtgttcctagtgcctctgaaataattaaagcctccagcaaagatgccatc
aggtttcttgactcggtgcctcctgcagccattaacaacttcagacagacagctcagaaa
ctgattgatgagaagggggccgtggaagccttggctgcagcattagctcacatctcgggg
gcgaccaccgttgaacagcgatccttgatcaactctgatgtgggctttgtgacgatggtc
ttacagtgctccatagagatgcacaacattggctatgcctggagaggattgaaagagcag
cttggggaagagatcgatgacaaagtgacccggatgaccttcctcaaggggaaaatgggc
gtttgttttgatgtccctgctgcagaagcaaagacattccaggaacaatggcaggactca
aggcgctggcagctctctgtggccaccgagagacccgagctggagcaacagcctgatgaa
ggcagaggcttctccagtttccgcaaccagaggcagggaggcggtggccgaggtggcggc
cgaggcagcggccggggtggtggccggggcggccggagtggtggcggtagcttcaacagg
aatgacaaatttcagaatagaggccagaagcgaagttttcagagagcattttctcatcgt
taa
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