Trichosurus vulpecula (common brushtail): 118828341
Help
Entry
118828341 CDS
T10126
Symbol
HIF1A
Name
(RefSeq) hypoxia-inducible factor 1-alpha
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
tvp Trichosurus vulpecula (common brushtail)
Pathway
tvp04066
HIF-1 signaling pathway
tvp04137
Mitophagy - animal
tvp04140
Autophagy - animal
tvp04148
Efferocytosis
tvp04659
Th17 cell differentiation
tvp04919
Thyroid hormone signaling pathway
tvp05167
Kaposi sarcoma-associated herpesvirus infection
tvp05200
Pathways in cancer
tvp05205
Proteoglycans in cancer
tvp05208
Chemical carcinogenesis - reactive oxygen species
tvp05211
Renal cell carcinoma
tvp05230
Central carbon metabolism in cancer
tvp05231
Choline metabolism in cancer
tvp05235
PD-L1 expression and PD-1 checkpoint pathway in cancer
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04066 HIF-1 signaling pathway
118828341 (HIF1A)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
118828341 (HIF1A)
04137 Mitophagy - animal
118828341 (HIF1A)
04148 Efferocytosis
118828341 (HIF1A)
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
118828341 (HIF1A)
09152 Endocrine system
04919 Thyroid hormone signaling pathway
118828341 (HIF1A)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
118828341 (HIF1A)
05205 Proteoglycans in cancer
118828341 (HIF1A)
05208 Chemical carcinogenesis - reactive oxygen species
118828341 (HIF1A)
05230 Central carbon metabolism in cancer
118828341 (HIF1A)
05231 Choline metabolism in cancer
118828341 (HIF1A)
05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
118828341 (HIF1A)
09162 Cancer: specific types
05211 Renal cell carcinoma
118828341 (HIF1A)
09172 Infectious disease: viral
05167 Kaposi sarcoma-associated herpesvirus infection
118828341 (HIF1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tvp03000
]
118828341 (HIF1A)
Transcription factors [BR:
tvp03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
118828341 (HIF1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
HIF-1a_CTAD
PAS
HIF-1
PAS_9
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
118828341
NCBI-ProteinID:
XP_036590830
LinkDB
All DBs
Position
8:217321878..217370506
Genome browser
AA seq
810 aa
AA seq
DB search
MEGAEGANDKKKISSERRKEKSRDAARCRRSKESEVFYELAHQLPLPHNVSSHLDKASVM
RLTISYLRMRKLLDAGDLEAEAEMEAQLNCFYLKALDGFVMVLTEDGDMIYMSENVNKCM
GLTQFELTGHSVFDFTHPCDHEELREMLIYRNGPVKKGKEQNTERSFFLRMKCTLTSRGR
TMNIKSATWKVLHCTGHIRVYDTCNNQSQCGYKKPPMTCLVLICEPIPHPSNIEVPLDSK
TFLSRHSLDMKFSYCDERITELMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQV
TTGQYRMLAKRGGYVWVETQATVIYNTKNSQPQCIVCVNYVVSGIVQHDLIFSLGQTECM
LKPVEAVDMKITQLLTKVETEDTSSLFDKLKKEPDALTLLAPAAGDTIISLDFDNNDEQQ
LEVPLYNDVMLPSSSEKLQNINLAMSPLPTSETTKPLRSNADPALNQEVALKLEPNPEPL
ELSFTMPQIQDRPASPSDASTRQSSPEPSSSSEYCFDVDNDMANEFKLELVEKLFAEDTE
AKNPFSTQDTDLDLEMLAPYIPMDDDFQLRSFDQLSSLENTSTSSQSVSTPNIFQQSQTQ
EHTTSDEVKTVKIEGTDENKILIASPYSVYVINEPASDPASPYDGNRSRTVSPDRSGKGV
IEQMEKSHPRSPNLLSVTLSQRTTAIDEELNPKILALQNSQRKRKMEHEGSLFQAVGIGS
LHQQPDDPGATISLSWKRVKGCKSSEQNGAEQKTVILIPSDLVSRLLGPSMDESGLPQLT
SYDCEVNVPIQGNRNLLQGEELQRALDQLN
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atggagggcgccgagggtgcgaacgacaagaaaaagattagctctgaacggcgaaaggaa
aagtctcgagatgcagccagatgtcgtagaagtaaggaatctgaagttttctatgaactt
gctcaccagttgcctcttcctcataatgtgagctcacatcttgataaggcttctgtcatg
aggcttaccatcagttatttgagaatgagaaaacttctagatgctggtgatctggaagct
gaagctgaaatggaagcacagctaaattgcttttatttgaaagccctagatggttttgtt
atggttctcacagaggatggtgatatgatttatatgtctgaaaatgtgaacaaatgtatg
ggattaactcagtttgaactaactggacacagtgtatttgattttacacatccatgtgac
catgaggaactgagagaaatgcttatatataggaatggtcctgtgaaaaaaggcaaagaa
caaaacacagaacgcagctttttcctgagaatgaagtgtaccttaactagtcgaggacga
accatgaacataaagtccgctacatggaaggtacttcattgtacaggtcacattcgtgtg
tatgatacctgcaataaccagtctcagtgtgggtataagaaaccacctatgacctgtttg
gtattgatttgtgaacccattcctcatccatctaatattgaagttcctttggatagcaaa
acttttctcagtcgccacagcctggatatgaaattttcctattgtgatgaaagaattaca
gagctaatgggatatgaaccagaggaacttttaggtcgctcaatttatgaatactaccat
gctttagactcagatcatctgaccaaaactcatcatgatatgtttactaaaggacaagtc
actacaggacaatatagaatgcttgccaaacggggtggatacgtctgggttgaaactcaa
gcaactgtgatttacaatactaaaaactcccaaccacaatgtatagtgtgtgtaaattat
gttgtaagtggtattgttcagcacgacttgattttctcccttggacaaacagaatgtatg
ctaaaaccagtggaagcagttgatatgaaaataactcagttgttgaccaaggttgaaaca
gaagatactagcagcctttttgataaacttaagaaggaaccagatgctttaactttatta
gccccggctgctggagacactatcatatcgttggactttgacaataatgatgaacaacag
cttgaagttccattatacaatgatgtcatgctcccctcatctagtgagaaattacagaat
ataaatttggcaatgtctccactacccacgtctgaaactacaaaaccgcttcgtagcaat
gctgaccctgcactcaatcaagaagttgcactaaaattagagccaaatccagagccactg
gaactttcttttaccatgcctcaaatacaggatcgtccagctagtccttctgatgcaagc
actagacaaagttcgcctgagcctagcagttccagtgaatattgttttgatgtggataat
gatatggccaatgaattcaagttggaattagtggagaaactttttgcagaagacacagaa
gcaaagaatcctttttctactcaggacactgatttagacttggaaatgttagctccttat
atcccaatggatgatgactttcagttgcgttcctttgatcaactctcatcattagagaat
acttctacaagttctcaaagtgtgagcacccctaacatttttcagcagtctcaaacacaa
gaacacactaccagcgatgaagttaaaacagtgaaaatagaaggtacagatgaaaataaa
atattgattgcttctccatattctgtttacgtaattaatgaacctgccagtgacccagca
tcaccatatgatgggaatcgaagtcggacagtctctcctgacagatctggaaaaggagta
atagaacaaatggagaaatctcatccaagaagtcctaatctgttgtctgtcactttgagt
caaagaactactgctatagatgaggagcttaatccaaagatattagctttgcagaattct
cagagaaaaaggaaaatggaacatgaaggttcactttttcaagcagtaggaattggatca
ttacatcagcaaccagatgatcctggagctactatatctctttcttggaaacgtgtaaaa
ggatgcaaatctagtgaacagaatggagcagagcaaaagacagtcatcttaataccatct
gatttagtaagtagactcctgggcccatcaatggatgaaagtggactaccacagctcacc
agttatgattgtgaagttaatgttcctatacaaggaaatagaaacctgctgcaaggtgaa
gaattacagagagctttggatcaacttaactga
DBGET
integrated database retrieval system
