Trichosurus vulpecula (common brushtail): 118828442
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Entry
118828442 CDS
T10126
Symbol
ACIN1
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus isoform X1
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
tvp Trichosurus vulpecula (common brushtail)
Pathway
tvp03013
Nucleocytoplasmic transport
tvp03015
mRNA surveillance pathway
tvp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118828442 (ACIN1)
09122 Translation
03013 Nucleocytoplasmic transport
118828442 (ACIN1)
03015 mRNA surveillance pathway
118828442 (ACIN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tvp03019
]
118828442 (ACIN1)
03041 Spliceosome [BR:
tvp03041
]
118828442 (ACIN1)
Messenger RNA biogenesis [BR:
tvp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
118828442 (ACIN1)
Spliceosome [BR:
tvp03041
]
Complex C
Other components
EJC/TREX
118828442 (ACIN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
SAP
Motif
Other DBs
NCBI-GeneID:
118828442
NCBI-ProteinID:
XP_036590929
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Position
8:177384510..177421232
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AA seq
1244 aa
AA seq
DB search
MAELEEVTLDGKPLQALRVTDLKAALEQRGLAKSGQKSALVKRLKGALMLENLQKHSTPH
TAFQPNSQIGEEMSQNSFIKQYLEKQQELLRQRLEREAREAAELEGKGCSVSEEKGESDD
ERPRKGERRSSRVRQARAAKLSESSQAAEEEEERETPSRNLRARADRNVKTEEEEEEEEE
DDDDEEEEEEEDEEEEMQKAIELPILKQFQGEKVEARAAFQEVMEGVTKSTGYQEQEGLE
EGGRTTGAQEEAEAYQLARLQQEKSVKASEVEVEEEKEDEGEREVKTTKSPEEKQKSPSP
PRLTEDLLKVSLRPQPEQVASEEETPPPLLTKEASTPPAPNEPTTGEETELLEGPAPPDL
TQRSPPFEEAEAKELLLSPHTVHVVGRLPSLPSPPGTKAKSPTEIAQEGNSLLPIETSTV
TGPPAEEALHSEPEHSAPLIALKAEESNVVKVNTKVPSEQPPSLVQKESKGDSPTHLPSH
RTKRSPSSQSSSSSSTSRSRSRSPDSSGSRSRSPPRSKQRDTSWSRSCSNPRSGTKVGSR
STSESRSRSRSRSRSASSNSRKSRSPGVSRESSTSYSHTKDPSPGQEVAPLSSPSMPQQQ
VLEPKERTTISPAFAPARGMSQAEPVEKHKTQRLKPERGSPKKFEAEQAEPPATAETRAP
EVQTPQQPAPGRIQHTVEEKEEVTMETAENRPENEVPEPPMPIADAASSEERPEGNAEDE
EKKESSMPKSFKRKISVVSATKGVPAGNSDTEGGQPGRKRRWGASTATTQKKPSISITTE
SLKSLIPDIKPLAGQEAIVDLHADDSRISEDETERNGEDGTHDKGLKICRTVTQVVPAEG
QENGQREEEEEEKEPEVEPPEAPQVSVEVALPPPVEHEVKKVTLGDTLTRRSISQQKSGV
SITIDDPVRTAQVPSPPRGKINNIVHISNLVRPFTLGQLKELLGRTGTLVEEAFWIDKIK
SHCYVTYSTVEEAVATRTALHGVKWPQSNPKFLCADYAEQDELDFHRGLLPDRPSEPKAE
EQGGPRPLHPPPPPPAQPPHHPRAEQREQERAVREQWAEREREMERRERTRSEREWDRDK
VREGPRSRSRSRDRRRKERAKSKEKKSEKKEKAQEEPPAKLLDDLFRKTKAAPCIYWLPL
TDCQIVQKEAERAERAKEREKRRKEQEEEEQKEREKEAERERSRQLEREKRREHSRERER
ERERERDRGDRDRERGRERDRRDTKRHSRSRSRSTPVRDRGGRR
NT seq
3735 nt
NT seq
+upstream
nt +downstream
nt
atggcggagctggaggaggtgactctggacgggaagccgcttcaggcgctgcgggtgacc
gacctgaaggccgcactagaacagcgaggcctggccaagagtggacagaagagtgccctg
gtcaagcggctcaaaggggctctaatgctggagaatttacagaaacactcaacacctcac
actgcattccagccaaactcgcagattggtgaggagatgagccagaatagctttataaag
cagtatctggaaaagcagcaggagctactccggcagcgactggaacgagaagctcgagaa
gctgcagaacttgaaggaaaaggctgttccgtctctgaagagaaaggtgaatctgatgat
gaaagaccaagaaaaggagaaagacgctcatccagggtgagacaggcaagagcagccaag
ctctctgaaagcagccaggctgctgaggaagaagaggagcgggaaacaccttccagaaat
ctgagggccagagcagatcgaaatgtgaaaacagaggaagaagaggaagaggaggaggaa
gacgatgacgatgaagaggaagaggaggaggaagatgaagaagaagagatgcaaaaagct
attgagctgccaattctgaaacagtttcaaggggaaaaggtggaagccagagcagcattt
caggaggtaatggagggggtaaccaaaagcactggataccaggaacaggaagggctagag
gaaggaggaagaacaacaggggcccaagaggaagctgaagcttatcagctagccagactg
cagcaagagaaaagtgtgaaagcatcagaagtagaagtggaggaagagaaggaggatgaa
ggagaaagagaagtaaaaactacaaaatccccagaagaaaagcaaaaatctccttcgcca
cctcggctgactgaagatctgctgaaggtttcccttaggccacaaccagaacaagttgcc
agtgaggaagagactcccccacccctgctgaccaaggaagcatccactccaccagctcct
aatgagcccaccaccggagaagaaacagagctattggaaggcccagccccccctgacctt
acccagaggtctcctccctttgaagaggctgaggccaaagaactactattatccccacat
actgtccacgtggtaggaaggctgccttccttgccaagccctccaggcaccaaagcaaag
tctccaacagagatagcacaagaggggaactcccttcttccaattgaaacaagcacagtg
actggacctccagctgaagaggctctccatagtgagccagagcattctgccccactgatt
gctctaaaagctgaggaatcaaatgtagtcaaggtaaacaccaaggttccctctgaacag
ccaccatctttggtgcagaaggaaagcaaaggagactcccctacccatctcccaagccac
aggacaaaacgttcaccctccagccaatcttcatcatcttcctccacttcccggtcgaga
tcccgctctccggacagctcaggctctagatcccgatcaccccccagatccaagcagagg
gatacatcttggtcacgatcttgttccaacccacgttcaggaaccaaagtaggctccagg
tcaacatcagagtctaggtcccgttctcgttctcgatcccgttcagcatcaagcaacagt
aggaaatctcggagccctggagtctccagggaaagcagcaccagctactcccacaccaaa
gatccctctcctgggcaggaggttgcacctctcagcagtccgtcaatgccacagcagcag
gtccttgaaccaaaagagcggactaccatctctccagcctttgccccagcgaggggtatg
agccaggctgaaccagttgagaaacataagacgcagaggttgaaaccagagcgggggagc
cccaagaagtttgaagctgaacaggcagaaccacctgccactgcagagacccgagcgcca
gaggtgcagacccctcagcagccagccccaggaaggatccagcacactgtcgaggagaag
gaggaagtgaccatggagacagctgaaaacaggcctgagaatgaggtgcctgagcccccc
atgcccattgcagatgcagcgagcagtgaagagcgccctgagggcaatgcagaggatgag
gagaagaaagagagctcgatgcccaaatccttcaagaggaagatctccgttgtctcagct
accaaaggggtaccagctggaaacagtgacacagaaggaggccagccaggacggaagagg
cgttggggggctagcacagctaccacacagaagaagccctccatcagcatcaccactgag
tctcttaagagccttatccccgacatcaaacccctggcggggcaggaggccattgtggat
ctacatgctgatgactcaaggatctctgaagatgagacagagcgtaatggtgaggatgga
acccacgacaaggggctgaagatatgccggaccgtcactcaggtggtgccagcagaaggc
caggaaaatgggcaacgtgaagaagaggaggaagaaaaagagcctgaagttgagccccct
gaagcacctcaggtttctgtagaagttgccttgcctccacctgtggagcatgaagtaaaa
aaagtgacgctgggagacactctgacccggcgttcaatcagccagcagaagtctggtgtg
tctatcacaatcgatgatcctgttcgtacagcccaggtgccctcgccacctcggggcaag
atcaataacattgttcatatctccaatttggttcgtccttttaccttaggccagttgaag
gagttgctgggtcgtacggggaccctggtggaagaagccttctggatagataaaatcaag
tcccattgctacgtcacgtattcaacagtagaggaagctgttgccacccgaacagctctg
catggagtcaagtggccccagtccaatcccaaattcctgtgtgctgactatgcagagcag
gatgagctggattttcaccgaggcctcttgccagaccgaccctctgagcctaaagctgag
gagcagggaggcccacggcccctgcaccctccgcccccgcccccagcccagccacctcat
cacccaagggcagagcagagggagcaggagcgggcagtgcgggagcagtgggcagagcga
gagcgagagatggagcgacgggaacgtactcgctcagaacgggagtgggaccgggacaag
gttcgtgaagggccccgttcccgatctcgctcccgtgaccgccgccgcaaggaacgagcc
aagtccaaagagaagaagagtgaaaagaaagaaaaggcccaggaggaaccacctgccaag
ctgctggatgacttgttccgtaagaccaaggcagctccctgcatctactggcttcctctg
actgactgccagattgttcaaaaggaggctgagcgggccgagcgggccaaggagcgtgag
aaacggcgaaaagagcaggaagaagaagaacagaaagaacgagagaaggaggctgagcga
gagcggagccggcagctagagagagagaaacgtcgagagcacagccgagagagggaaaga
gagcgggaacgggagagggaccggggggatcgggatcgggaaaggggccgcgagagggat
cgtcgggacaccaagcggcacagtcgaagccgcagccgcagcaccccagtgcgcgacagg
ggtgggcgccgctag
DBGET
integrated database retrieval system
