Trichosurus vulpecula (common brushtail): 118828644
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Entry
118828644 CDS
T10126
Symbol
VPS39
Name
(RefSeq) vam6/Vps39-like protein
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
tvp Trichosurus vulpecula (common brushtail)
Pathway
tvp04140
Autophagy - animal
tvp04148
Efferocytosis
tvp05132
Salmonella infection
Brite
Membrane trafficking [BR:
tvp04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
118828644 (VPS39)
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NCBI-GeneID:
118828644
NCBI-ProteinID:
XP_036591347
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Position
8:complement(196559112..196610566)
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AA seq
875 aa
AA seq
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MHDAFEPVPILEKLPLQIDCLAAWEEWLLVGTKQGHLLLYRIRKDVGCNRFEVTLEKSNK
NFSKKIQQIHVVSQFKILVSLLENNIYVHDLLTFQQITTVSKAKGASLFTCDLQHAESGE
EVLRMCVAVKKKLQLYFWKDREFYELQGDFSVPDVPKSMAWCKNSICVGFKRDYYLIRVD
GKGSTKELFPTGKQLEPLVAPLADGKVAVGQDDLTVVLDEEGNCTQKCALNWTDIPISME
HQPPYIIAVLPRYVEIRTFEPRLLVQSIELQRPRFITSGGSDIVYVASNHFVWRLIPVSI
ATQIQQLLQDKQFELALQLAEMKDDSDSEKRQQIHHIKNLFAFNLFCQKRFDESMQVFAK
LGTDPTHVMGLYPDLLPTEYRKQLQYPNPLPVLSGAELEKAHLALIDYLTQKRNQLVKKL
NDSDHQSSTSPLMEGTPTIKSKKKLLQIIDTTLLKCYLQTNVALVAPLLRLENNHCHIEE
SEHVLKKAHKYSELIILYEKKGLHEKALQVLVDQSKKANSPLKGHERTVQYLQHLGTENL
HLVFSYSIWVLRDFPEDGLKIFTEDLPEVEALPRDRVLNFLIENFKGLAIPYLEHIIHTW
EETGSEFHNCLIQLYCEKVQGLMKEYLSSFPTDKTPVPAGDEEGELGEYRRKLLMFLEIS
SCYDPSQLICDFPFDGLLEERALLLGRMGKHEQALFIYVHILKDTRMAEEYCHKHYDRNK
DGNKDVYLSLLRMYLSPPSVHCLGPIKMELLEPQANLQAALQVLELHHSKLDTTKAINLL
PANTQINEIRIFLEKVLEENAQKKRFNQVLKNLLQAEFLRVQEERIFHQQVKCIITEEKL
CMVCKKKIGNSAFARYPNGVVVHYFCSKEVNPTDT
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atgcatgacgccttcgagccggtgccgatcctggagaagctgccgctgcagatcgactgt
ctggcggcctgggaggaatggcttctcgtgggaaccaagcaaggtcatcttctcctctac
aggattcggaaggatgttggttgcaacagatttgaagtaactctagaaaaatccaacaag
aatttctccaaaaagattcagcagatccacgtggtttcccagtttaagattctggtcagt
ttattagaaaataacatttacgttcatgacctgttgacatttcaacaaatcactactgtt
tcaaaggcaaagggggcatctctgtttacctgtgacctccagcacgctgaatcaggtgag
gaggtgctgcggatgtgtgtggctgtgaagaagaaactccaactgtatttctggaaggac
agagagttttatgaactacagggggactttagtgtaccagatgtgcccaagtccatggca
tggtgtaaaaattccatttgcgtgggtttcaagagagactactatctaataagggtggat
ggaaaagggtccaccaaagagctctttccaacagggaaacaactggagcccttggtggca
cctctggcggatggaaaagtagctgttggtcaggatgatctcactgtggtactggatgag
gagggcaactgtacgcagaagtgtgccctgaattggacagatataccaatttccatggag
caccagcctccatatatcattgcggtgttgcctcggtatgtcgagatccggacatttgag
ccccggctgctggtgcagagcattgagttacagagaccccggttcattacctcaggaggt
tcggacatcgtctacgtggccagcaatcatttcgtctggcggctcatccctgtttctata
gcgacccaaatccagcagcttctccaggacaagcagtttgaactggccctgcagctggcg
gaaatgaaagatgattctgacagtgagaagcgacagcagatccatcacattaagaacctg
tttgcttttaacctcttctgtcagaagcgttttgatgagtccatgcaagtctttgcaaaa
cttggcacagatcctacccatgtgatgggtttgtaccctgatctgctgcccactgagtac
agaaagcagctgcagtatcccaacccactgccagtgctctctggggctgaactagagaag
gctcatttggctctaattgactacctgactcagaaaagaaaccaactggtgaagaagctc
aatgactccgaccatcagtcaagcacctctcccctcatggaaggcacccccacgatcaag
tccaagaagaaactccttcagatcatagacaccaccctgcttaagtgctatctccagaca
aacgtggccctggtggctccattgctgcgtctggagaacaaccattgccacattgaagaa
agtgagcatgtattgaagaaggctcataagtacagtgagctgatcatcctttatgagaag
aaggggcttcatgagaaagctttgcaggtgctggtggaccagtctaagaaagccaactcc
cccctgaaaggccatgagaggacagtgcagtatcttcagcatctgggcacagagaacttg
catttggtgttctcctactctatctgggtgctgagagacttcccagaagatgggctgaaa
atatttactgaagacctccctgaggtagaggctctaccgcgggaccgtgtgctgaacttc
ttaatagaaaactttaagggcctggctattccttatttggaacacatcatccatacttgg
gaagagacaggttctgagttccacaactgccttatccagctgtactgtgagaaggtccaa
ggactgatgaaagaatacctcagttccttccctacagataaaactccagtccctgctggc
gatgaagagggggagctgggagaataccggcggaagctcctcatgttcctggagatctct
agctgctatgatccaagtcagctcatctgtgacttcccttttgatggtctcctggaggaa
agagctctccttttggggcgaatggggaaacacgaacaagctctcttcatttatgtccac
attctgaaggatacaaggatggctgaagagtactgccataaacactatgaccgaaacaaa
gatggcaacaaagatgtgtatctgtccctgcttcggatgtatctatccccacctagtgtt
cactgcttggggccaatcaagatggagctgctggagccccaagctaatctccaggctgcc
ctgcaggttctggaattacaccacagcaagctggacaccaccaaggccatcaaccttctt
ccagccaacactcagatcaatgagatccgcatctttctggaaaaggtcctggaggaaaat
gcacaaaagaaacgtttcaatcaagtcctcaaaaaccttcttcaggctgagttcctaagg
gtccaggaggagcgcattttccaccagcaagtgaagtgtatcatcacagaagagaagttg
tgcatggtgtgtaagaagaagatagggaacagtgcatttgccaggtaccccaatggagtg
gttgtgcactacttttgttccaaagaggtcaacccaactgacacctga
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