Trichosurus vulpecula (common brushtail): 118828784
Help
Entry
118828784 CDS
T10126
Symbol
JMJD1C
Name
(RefSeq) probable JmjC domain-containing histone demethylation protein 2C isoform X1
KO
K11449
jumonji domain-containing protein 1C [EC:1.14.11.-]
Organism
tvp Trichosurus vulpecula (common brushtail)
Pathway
tvp05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
118828784 (JMJD1C)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tvp03036
]
118828784 (JMJD1C)
Chromosome and associated proteins [BR:
tvp03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
118828784 (JMJD1C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JmjC
Tudor_KDM3B
DUF6630
C1_2
zf-C5HC2
FYVE
Motif
Other DBs
NCBI-GeneID:
118828784
NCBI-ProteinID:
XP_036591540
LinkDB
All DBs
Position
8:complement(25974779..26199704)
Genome browser
AA seq
2321 aa
AA seq
DB search
MIVVNDQVLEPQNVDPFMVQMTFLDDVVHSLLKGEDIGISSHRRRSIQSSTAVHGHYTRA
QAGSPRQVMNSQATGPRQIPHQLLRNARLTKRRSSDSSVPEDEKMREEKYDFLGHGENLR
SKNRYFPNKRRKIEETEKKLNLKRLRPDHLSDFSDSDTENANNKRMTGPGPYREPNAENE
VMNQNISKINGDEGKSQHGEGAGGQSQSLWVQIQEEKKHDAENLKRPEKTIFGVTEEVMF
YDPNANDVHIQECKTEKAHTMELFPKEQFVSRPPTPKCVIDITNETSSEKVVQENSTRTF
GFQTFQKIEPHSSDSKLLFASSKFLETRKQTETSWVNSIVNKMDLASSVVRNPLSVGKDK
NPFGSYRDSKLHQRSSPEILKSKFGALVDAPKPKSNSLFDVIQSKLTRSPDSLKSNTSFS
NSSLATGERRLTNKTEHDLPRSSFHPVPTRVSALEPTKPPLIVDKSEHFTVYRDPAVPPQ
ETGGNNIAAFLSQHGYPTSHRTCVNPNSHHPTLSPAPVHMTNPTLSHPVNSTAHTHHPHL
HHPTVLPGVPPSSLMGCHPRLEAAHASSLSHLALAHQQQQQQQQQQQQQQQQMLQQPSPH
ILGQAHPPASYNQLGLYPVIWQYPNGTPSFSGLSAPSNKWVHPENPVNTEASLRRNTPSP
WLHQPTPVTSADGLGLLSHIPVRPSSADPHRPLKMTTHSSPPLSKTLVDHHKEELERKAF
MEPLRTIVSAPAKGDLDRAPAGKDSHLHRHFADPMMSQLQRPPQESGERLNKYKEEHRRV
LQESIDVAPFTTKRKTVEGERENYPRITALSAPSPKSQTAKQDKDGDRSVSDLYKMKPSA
PQSLPQSNYFTTISNSVVNEPPRSFPSKEGSGLFADKQSNSPSTIANPQALTSFISSLSK
PPPLIKHQPEGEGIGSKIGEQLPQQMPSHSITAFGNDCRSPTHLTVSSSNPIRSMPALHR
APVFHPPIHPGLDRKESTYSSLSPPTLTPVLPVNAGGKIQELQKPPTLVPEPKDAQATFK
NASERSLSEMWKSNSALSSEKVTWPVEKSGGKPPAATASVIVRPPSSAKYESVPVLQLAP
KERSTERSSAGASPADGWKPSEAREPVRVIISNSNSVIPPTQYEKNFEAVPQGSVPSSII
VPTATGLMCSTKTDVTPAATTASSASSWGGSEVTYSSSSTVSTSTSLQCVTSRSVGQQTM
PIEEFDIGTTTLIATASSKTGGVAQPSSGVSSTADFMYLKKHKAVLVATQFKSDNANEAE
PNAGRSQTCPAPTPLENPVTCSTANKAHTVSSGQSSQTSQPNYHTKLKKAWLTRHSEEDK
NTNKMENSGNTVSEIIKPCSVNLMASTSSEIHNSVDTKVLGDKPAKDDKASKKKLKRPYE
SGSESEEDSDGSESKAEQRAKRQPKPTYKKKQNDLQKRKGELEEEAKPNGLLSRSVREKN
KLKLSSSSNSAGIPRSVLKDWRKVKKLKQTGESFLQDDSCCEIGPNLQKCRECRLIRSKK
GEEPTHSPVFCRFYYFRRLSFSKNGVVRIDGFSSPDQYDDEALSLWTHENDDDDELDLET
SKYILDIIGDKFCQLVTSEKTALSWVKKDAKIAWKRAVRGVREMCDACEATLFNIHWVCQ
KCGFVVCLDCYKAKERKSSRDKELYAWMKCVKGQPHDHKHLMPTQIIPGSVLTDLLDAMH
HLREKFDIQSHCLCTNKQNVQVEKIPAMNGVTQVLQNVLDDGDTISLCMPESQQQNSPQK
SETDGNTSPRSDVSTDSKLTPPESQSPLHWLADLAEQKAREEKKEIKECALGETVKEERD
QDISDSPDCKTSPAVSQNSEQGSTLRDLLTTTAGKLRVGSTDAGIAFAPVYSTGAPSDKS
GRTVPNILDDIIASVVENKIPPNKTSKIEEEEEEEEGEGEEERGEEEGEREGEGEGEGGP
EDSLPTALDESDQLSEDVPHSWMCEKHVLWLHDHMNHDNWKLFKQCWKQGQPVVVSGVHK
RMNISLWKAESISLDFGDHQADLLNCKDSIISNANVKEFWDGFEDISKRQKVKSGETVVL
KLKDCPSGEDFKTLMPARYEDLFKSLPLPEYCDPEGKFNLASHLPGFFVRPDLGPRLCSA
YGVAAAKDHDIGTTNLHIEVSDVVNILVYVGVAKGNGVLSKSGVLKKFEEEDLDDLLRRR
LKDSTETPGALWHIYAGKDADKIREFLQKIAREQGLEVLPEHDPIRDQSWYVNKKLRQRL
LDEYGVKTCTVVQFLGDAIILPAGALHQVQNFHSCIQVTEDFVSPEHLVQSFHLTQELRL
LKEEINYDDKLQVKNILYHAVKEVVRALKMREEEMDDMDES
NT seq
6966 nt
NT seq
+upstream
nt +downstream
nt
atgattgttgtgaatgaccaggtactagaaccacagaatgttgatccttttatggttcaa
atgacctttcttgatgatgttgttcactctttgttgaaaggagaagatattggcatctcg
tcacaccgtagacgctccattcaaagtagcaccgctgttcacggtcattatacgcgtgct
caagccggtagcccaaggcaagttatgaactcacaggctacggggcccaggcagattcct
caccagctgctacgaaacgctcgactgaccaagaggaggagttcagatagcagtgtacca
gaggacgagaagatgagggaagagaaatatgatttcctaggccatggagaaaatcttaga
agcaaaaacagatactttcctaataaaagaagaaaaattgaagagactgaaaagaagcta
aatctaaaaagacttcgaccagaccacctttcagacttttctgacagtgacacagaaaat
gctaataataaaagaatgacagggccagggccgtatcgggagccgaatgctgaaaatgag
gtgatgaaccaaaacatttcaaagatcaatggagatgaagggaaatcccagcatggtgag
ggagcagggggacaaagtcagtctctttgggttcaaatccaagaagaaaagaaacatgat
gcagaaaatctcaagcggccggaaaagactatttttggtgtcacagaagaggttatgttt
tatgatccaaatgccaatgatgtacatattcaggagtgcaaaacagagaaagcacatact
atggaattattcccgaaggagcagtttgtgtccagaccacctacaccaaaatgtgttatt
gacattacaaatgaaaccagttcagaaaaggtggttcaggaaaactccacaaggaccttt
ggttttcagacatttcagaaaatagagcctcatagtagtgactcgaaacttttgtttgcc
agttcaaaatttttagaaacaagaaaacagactgaaacgagctgggtcaatagcattgta
aacaaaatggatttagcatcatctgttgtgaggaaccctttatctgttggaaaagataaa
aatccatttggatcatatcgcgacagcaaactgcatcaacgaagttcacctgagattctg
aagtctaaatttggtgctttggtagatgcacccaaaccaaaatccaattctttatttgat
gttattcagtccaaactcactcgttctcctgattctttgaaatctaacaccagcttctca
aacagtagtcttgccactggagagagaaggctgacaaataaaacagaacatgatttaccg
agatctagttttcatccagttccaactcgtgtcagtgcattagaacccaccaagccccct
ctaattgttgacaaaagtgagcatttcacagtttacagagatcctgcagttcctcctcaa
gagacgggggggaacaacattgcagcattcttaagccagcacggttaccctacctcccat
agaacttgtgtcaacccaaacagtcatcatcctactttgagtcccgctcccgtccacatg
acaaacccaacgctgtctcatcctgtgaacagcaccgcccacactcaccaccctcatttg
caccatccgacagtgttacctggagtgcctccatcctccttaatgggttgccacccacga
ctagaagctgctcatgccagcagcttgagccacttagcgctagctcaccagcagcagcag
cagcagcaacagcagcagcagcagcagcagcagcagatgctacagcagccgtcacctcat
atcctcggacaagcacatccacctgcttcctataatcaacttggactctacccagttatt
tggcagtatcctaatgggacacctagcttctcaggactcagcgcaccttctaacaaatgg
gtccacccggaaaatccagtcaataccgaagcctctttgcggaggaatactcccagtcct
tggttacatcagcccacccctgtgacctctgctgatggtcttgggttactgagtcacatt
cctgtcaggccttccagtgcagatcctcatcggccccttaaaatgacaactcattctagt
ccaccgttatcaaaaacgttagtagatcatcacaaagaagaattggagaggaaagctttt
atggaacccctcaggactattgtgtctgcaccagccaagggtgacctggatcgagcaccg
gctgggaaagacagtcacttgcacagacattttgcggacccgatgatgagccagttacag
aggccgcctcaggagagcggagagaggctgaacaagtataaagaggagcaccgaagggtc
cttcaggaaagtattgatgttgctcccttcacaacaaagaggaagactgtggagggagag
agagagaattatcccagaatcacagctctgtctgctccaagcccgaaaagccaaaccgcc
aaacaagacaaagatggggaccgctctgtgtcagacctttacaaaatgaagccctcagcg
cctcagagtttaccacaaagtaactacttcaccaccatctcaaacagcgtagtgaatgag
ccaccacgatcattcccatccaaagaaggctctggtctgtttgctgacaaacagagtaac
agcccctcaacaatagccaatcctcaagccctgacttcttttatttcatcactttcaaag
cccccacctctgattaaacaccaaccggaaggggaaggcataggaagcaagataggagaa
cagcttccccagcaaatgccatctcactccataactgcttttggaaatgactgtcggagt
cctacgcatttgacagtttcttcatcgaatccaatccggagtatgcctgcattacataga
gcaccagtttttcatccacccatccatcccggtctggacagaaaggaaagcacctatagc
agcctttcccctcccaccttaactccagttctgccagtaaatgctgggggaaaaatacag
gaattacagaaacctccaacactagtacctgagccaaaagacgctcaggcgactttcaaa
aatgcttctgaacgcagtttgtcagaaatgtggaaatctaatagtgccctcagcagcgaa
aaagtgacctggcctgtggagaagagcggtggaaagccgccggctgccacggcatctgtc
atcgtgcgtcccccttcaagtgccaagtatgagagtgtgccggtgttgcagctggctccc
aaggagcgaagtactgagagatcttccgctggggcaagtccggctgatggctggaaaccg
tcagaagcccgagagcctgtgagagttatcatttccaattcaaactcagtcattcctcct
acccagtacgaaaagaactttgaggctgtcccccagggcagcgtgcccagctccatcatc
gtgcctacagccaccggtttgatgtgtagcacgaaaacggacgtgaccccagccgctacc
accgccagcagtgcctccagctggggtggttcagaagtaacgtattcgtcatcaagtaca
gtttcgacctctacatctttacagtgtgttacttcaagaagtgttggccagcaaacgatg
cccatagaagaatttgacatcggcaccacaactctcatcgctacagccagtagcaagaca
ggtggggtggcccagcccagttctggggtctctagcacagctgattttatgtacttgaaa
aaacataaggctgtattggttgcaactcagtttaaaagtgataatgccaacgaggctgag
cctaatgccggaagaagccagacatgtccagctcctactcccctcgagaatcccgtcacc
tgcagtacggcaaacaaggcacacactgtaagcagcgggcagagctcccagaccagtcag
cccaactaccacaccaagctgaaaaaggcctggctcaccagacactcagaggaggataaa
aacactaacaagatggaaaattcaggaaacactgtatcagagatcattaagccatgttca
gtcaatttaatggcctctacatcaagtgagatacataacagtgtggatactaaggtccta
ggagacaaacctgcaaaagacgataaagctagcaaaaagaagctgaaaagaccttacgaa
tctggctctgagagcgaagaagactcagatggaagtgagagcaaggctgagcagagggcc
aagcgccagcccaagccaacgtacaaaaagaagcagaacgatttgcaaaagagaaagggt
gaactcgaggaagaagcaaaacccaatgggcttcttagcagaagcgtccgagagaagaat
aagctcaaactgtcgagcagcagcaacagcgccggcatccctcgttcagtattaaaagac
tggcgtaaagttaaaaagctgaagcagactggcgagtcctttttgcaggatgactcctgc
tgtgagatagggcccaatttgcagaagtgcagagagtgcagacttattcgaagtaaaaaa
ggggaagaaccaactcactcaccagtgttttgtagattttactacttccggcgattgtca
ttcagtaaaaatggagtggttagaatagatggtttctcatctcctgaccagtatgatgat
gaagctctgagtttatggacacatgaaaatgatgatgatgatgagctagacttagagact
tctaaatatatcttggatattataggtgataagttctgtcagttagtaacatcagagaaa
acagctttgtcctgggtgaaaaaagatgccaaaattgcctggaaaagagcagtaagaggc
gtccgtgagatgtgtgatgcatgtgaagccacattgtttaatattcattgggtctgccaa
aaatgtggatttgtggtctgcttagattgttataaagcaaaggaaaggaagagttcaaga
gataaagagctctatgcttggatgaaatgtgtcaagggacaacctcatgatcacaaacac
ttgatgccaactcagatcataccaggctctgttttgacagatcttctagatgcgatgcac
catcttagagaaaaattcgatattcaatctcattgcctttgtactaacaaacaaaatgta
caagttgagaaaattcctgcgatgaatggagtgactcaggttttgcagaatgttcttgat
gacggtgatacaatttctctgtgcatgcctgagtctcagcagcagaattcccctcaaaag
tctgagactgatggtaataccagccccagaagtgacgtaagcacagacagcaagttaact
cctccagaatcccaatccccgctacactggttagcagatcttgctgaacaaaaagccaga
gaagaaaagaaagaaatcaaggaatgtgcccttggagaaactgtgaaagaagaaagagac
caagatatctctgattcgccagactgcaaaacctcccctgctgtgtcccagaacagtgaa
caaggatccaccttacgggacttgctgaccacaacagcaggcaagctgcgtgttggctcc
acggatgcaggcatcgccttcgcgccagtgtattctacaggagccccaagtgacaaaagt
ggaaggactgtgccaaacattcttgatgacatcattgcttcagttgttgaaaacaagatt
ccaccaaataaaacctccaagatagaagaagaagaagaagaagaagaaggagaaggggaa
gaagaaagaggagaagaagaaggagaaagagagggagaaggagaaggagaaggaggtccc
gaagacagcctcccaactgccctggacgagagtgatcagttgtccgaggatgtgccacac
tcatggatgtgtgagaagcacgtcttgtggcttcatgatcacatgaatcatgataattgg
aagcttttcaaacaatgctggaaacaaggacagcctgtggtggtttctggtgtacacaag
agaatgaatatcagcttgtggaaagcagaatcaattagtcttgattttggagaccaccag
gcagatctcctgaattgcaaagacagcattatttcaaatgccaacgttaaggaattctgg
gatggttttgaagacatttcaaaacggcaaaaggtaaaaagtggagaaacagttgtttta
aaattgaaagactgcccttcgggagaagacttcaaaactttgatgccagcaagatatgaa
gatctgtttaaaagcctgccgttaccagaatattgtgatcctgaaggaaaattcaatctg
gcctcccatttgccaggattttttgttcgtccagacctaggccccagattgtgtagtgca
tatggtgtagctgctgctaaagatcatgatattggaacaacaaatctccacattgaagtt
tctgatgttgtgaacattctagtctatgttggcgtagcaaaaggaaatggagtgctctca
aaatcaggcgtactaaagaaatttgaggaagaagacctcgatgaccttttaaggagaaga
ctgaaagactcaactgaaacccctggtgctctgtggcacatctacgcaggcaaagatgcc
gacaagataagggagtttctccagaagattgccagagaacaaggcctggaagtcctccca
gagcatgaccccatccgcgaccagagctggtacgtgaacaaaaagctccgccaaaggctg
ctggacgagtatggcgtgaaaacatgcactgttgtccagttcctgggtgatgcaattatc
ttgccggcaggtgcactgcatcaggtgcagaattttcacagctgcattcaggtgactgaa
gactttgtgtctccagaacatcttgtacagtcatttcacttaacgcaggaactgaggctg
ctgaaggaggaaatcaactatgatgacaaactgcaggtcaaaaatatcttataccatgca
gttaaagaagtggtgagagctttgaagatgcgcgaagaggaaatggatgacatggacgaa
agttaa
DBGET
integrated database retrieval system
