Trichosurus vulpecula (common brushtail): 118829217
Help
Entry
118829217 CDS
T10126
Symbol
PRPF39
Name
(RefSeq) pre-mRNA-processing factor 39 isoform X1
KO
K13217
pre-mRNA-processing factor 39
Organism
tvp Trichosurus vulpecula (common brushtail)
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tvp03041
]
118829217 (PRPF39)
Spliceosome [BR:
tvp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
118829217 (PRPF39)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
Mad3_BUB1_I
TPR_MalT
TPR_16
Motif
Other DBs
NCBI-GeneID:
118829217
NCBI-ProteinID:
XP_036592094
LinkDB
All DBs
Position
8:complement(209474014..209525503)
Genome browser
AA seq
668 aa
AA seq
DB search
MQNSAHMDEYNNSSNGNASNGSEVAIEQPTDFSTEIMNVMEMEQSPDGSPNVNEENTEEN
EISNAELPVTDTEAQFPPEYEKFWKTVENNLQDFTGWVYLLQYVEQENHLLAARKAFDKF
FTHYPYCYGYWKKYADLEKRHDNIKQSDEVYRRGLQAIPLSVDLWIHYINFLKETLDPDD
PETNNTIRGTFEHAVLAAGTDFRSDRLWEMYINWENEQGNLREVTTIYDRILGIPTQLYS
HHFQRFKEHVQNNLPRDLLTSEQFIQLRRELASVNGHSGDDGPPGDDLPSGIEDITDPAK
LITEIENMRHRIIEIHQEMFNYNEHEVSKRWTFEEGIKRPYFHVKPLEKAQLKNWKEYLE
FEIENGTHERVVVLFERCVISCALYEDFWIKYAKYMENHSIEGVRHVYSRACTIHLPKKP
MVHMLWAAFEEQQGNINEARSILRTFEECVLGLAMVRLRRVSLERRHGNMEEAEHLLQDA
VKNAKSNNESSFYAIKLARHLFKIQKNLPKSRKVLLEAIERDKENTKLYLNLLEMEYSGD
LKQNEDNILTCFDKAIHGSLPIKMRITFSQRKVEFLEDFGSDVNKLLDAYDEHQILLKEQ
DSLKRKAENGAEEPDEKKVHTEDATLASTQMIDGDIQANQAAYNYSAWYQYNYQNPWNYG
QYYPPPPT
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgcagaattctgctcacatggatgagtacaacaattctagcaatggcaatgcaagcaat
ggttctgaggtagccatagagcagcccactgatttcagtactgagattatgaatgttatg
gagatggaacagtcacctgatggttctccaaatgtgaatgaagaaaacacagaggaaaat
gaaatttcaaatgcagagctaccagtgacagacactgaagcacagtttcctccagaatat
gagaagttttggaaaactgtagaaaataatcttcaagattttactggctgggtatatttg
ctgcagtatgtagaacaggagaatcacttgctggctgccaggaaagcatttgacaaattt
tttacacactacccatattgctatggttattggaaaaagtatgcagaccttgaaaagcgc
catgacaacattaaacaatcagatgaggtttatcggcgagggcttcaggcaatacctctt
agtgttgatctttggattcattatataaacttcttaaaagaaacattggacccagatgat
cctgagacaaataatactataagaggaactttcgagcatgctgttttagctgcaggaaca
gatttccgatctgacagattatgggaaatgtacataaactgggaaaatgaacagggaaat
ctgagagaggttacaacaatatacgatcgtattcttggtattccaacacaactttatagt
catcatttccaaaggtttaaagaacatgtgcaaaataacttgcctagagatcttttaact
agtgagcagtttattcagctacgaagagaacttgcttctgtaaatggacacagtggcgat
gatggcccccctggtgatgacttaccttctggaattgaagatataactgacccagcaaag
ctaatcactgaaatagaaaacatgagacatagaatcattgagattcatcaagaaatgttt
aattacaatgagcatgaggttagcaaaaggtggacttttgaagaaggtattaaaagacct
tatttccacgtgaaaccattggaaaaggcacaactgaaaaattggaaagaatacttagaa
tttgaaattgaaaatgggactcatgaacgtgttgtggttctctttgaaagatgtgtcata
tcatgtgccctctatgaggacttttggattaaatatgccaagtacatggaaaaccatagt
atcgaaggagtgagacatgtctacagcagggcttgtacaatacatcttccaaagaaaccc
atggttcacatgctatgggctgcttttgaagaacagcagggtaatattaatgaagcaaga
agcattctaagaacatttgaagaatgtgtcctaggattggccatggttcgtttaagaaga
gtaagtttagagcgaaggcatggaaacatggaagaagctgaacacttgcttcaggatgcg
gttaagaatgccaaatcaaataatgaatcctcattttatgctataaaactagcccgacat
cttttcaagatacagaagaaccttccaaaatcaagaaaagtgctcttggaagccattgag
agagacaaagagaacacaaaattatacctcaacttacttgaaatggaatatagtggggac
ctcaaacaaaatgaagacaatatcctcacctgttttgacaaggctatacatggttcattg
cctattaaaatgagaattacgttttctcagagaaaagtggagtttctagaagattttggc
tctgatgtgaacaagcttctggatgcttatgatgaacatcaaatacttttaaaagaacaa
gactctttaaaaaggaaagctgaaaatggggcggaagagccagatgaaaaaaaagtacac
acagaagatgcaactttagcatcaactcaaatgattgatggagacatccaagctaaccaa
gctgcatataattatagtgcctggtatcaatacaattaccagaatccctggaattatgga
cagtattatcctccccctccaacctga
DBGET
integrated database retrieval system
