Trichosurus vulpecula (common brushtail): 118829256
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Entry
118829256 CDS
T10126
Symbol
NRDE2
Name
(RefSeq) nuclear exosome regulator NRDE2 isoform X1
KO
K26109
nuclear exosome regulator NRDE2
Organism
tvp Trichosurus vulpecula (common brushtail)
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tvp03019
]
118829256 (NRDE2)
Messenger RNA biogenesis [BR:
tvp03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
118829256 (NRDE2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NRDE-2
TPR_14
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
TFIIF_alpha
AP3D1
TPR_12
Motif
Other DBs
NCBI-GeneID:
118829256
NCBI-ProteinID:
XP_036592141
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All DBs
Position
8:complement(251586017..251655659)
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AA seq
1163 aa
AA seq
DB search
MALFPAFAGVSATPESSAGGSSRRDLDWLSNPSFCTGNIPTLPQNAVEIATLTSEKERLT
RSPLRLELSEGSDTHKRFKQASRKKKKEKKKKKKHQHHKKTKKKYEQSSDSESHSATDSE
KETSTGVIIDSKKEVEKPNSQENNTTDNSGSRFVWLDDIQALTTETFRTDKKPDLANWEY
KSLYRGDIARYKRKGNSCLGINPKKQRISWEGTSTEKKQLHKKFERYFSKRSMRSVSIDG
VAVCSRAEVFSPDPSPFIPVKDSDDEIPSSTSTWVNPLGVYDTSTTLWLQGQGPSDQETK
QPVSPKDSEDAVLKAKVEEFNRKVRENPRDIQLWLEFVSFQDEVMKGPSLYTISEGEQET
RRKSLKLILEKKLSILERAIESNQNSVELKLARLKLCTEFWEPSTLIKEWQKLIFLHPNN
TALWQKYLLFCQSQFSTFTVSKIHNLYGKCLSTLAAVQDGSILSHPALPGTEEAMLALFL
QQCHFLRQAGHTEKAISLFQAMIDFTFFKPDSVKDLPTRGQVEFFEPFWDSGEPRAGEKG
ARGWRAWMHQQERGGWVVVKPDEDEDEPEEDNQEIKNKTLPKWQIWLSVEHSREQRHWLP
WRPDKTKKQTDEDCDDPERQVLFDDLGASLIKLSSLELKYQLIDSFLQFLGVPSGCNLPT
SCLYLAMDENGIFDDGLSDEKPLTFFNPSFSGVNCVGHMDKMNRKGQWMGHCKEGEEFIQ
NIFHLILPLFSGKEKSHLCLSWLQYEIAKVTWYLQTKNKKRLKSQGKKCKKLAKNLLKEP
ENRNKFCLWKEYAHLEWLLGNTEDARKVFDTALSMAGPEDSSSRLYDLSLLYASLEVELS
GNLEGAATSRAVHVLTKLMENGPYGPYAGQVLAVNVLKARKAYEHTLEKHLDAPPFNCSG
QLVSMVGCFMLFQYLTIGINAAMQIYKQVFERLKGSISSEFTGPSANIRTPHLSTALEAV
TLMHTNLLRYHMKVSVFPLNPLREALSEALKLYPGNQVLWRLYVQIQNKSHNASKTRRFF
DIIIRSTQSLEPRLFAVQAEKMRKRLVEAVLRVDAGEIHSTIPETGLSNRIKALFENAIQ
SDHGSNCPLLWRMYLNFLVSLGNKERSKGVFYRALQHCPWAKVLYMDAVDYFPDQIQEIL
DLMTEKELRVRVPIEELELLLED
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atggccctgttcccggctttcgcaggagttagtgctactcctgagtcctctgccggtggt
agctcgaggagggatttagactggttgagcaacccaagcttttgtactggaaacatccca
accctgccacaaaatgctgtagagattgcaaccctgacttctgagaaggaacggcttaca
aggagccctttgagactggagctttcagaaggcagtgatacacacaaaaggtttaaacaa
gcaagtagaaaaaagaaaaaagaaaagaagaaaaagaaaaaacaccagcaccacaagaaa
accaagaaaaagtatgagcaatctagtgacagtgagtctcattcagctaccgactctgaa
aaggagacgtctacaggagtcatcattgacagtaaaaaagaagttgagaaaccaaacagt
caagaaaataataccaccgacaacagtggaagtcgctttgtttggcttgatgacattcag
gctctaacaacagaaaccttcagaacggataagaaaccagatctggcaaactgggagtat
aaatctctttatcgtggggatatagcaagatacaagaggaagggaaactcttgccttggc
atcaaccccaaaaagcagcgtatatcttgggaaggtacctccacagaaaagaaacaattg
cacaagaaattcgagcgctacttttctaagagaagcatgcgttcagttagcatcgatgga
gtggcagtttgtagcagagctgaagtattctctcctgatcccagcccattcataccagtg
aaagactctgatgacgaaattccatcttctacctcgacttgggtgaatcctttgggagtt
tatgatacatctacaacgttgtggttacaaggacagggtccttcagaccaagagacaaag
cagcctgtgtctccgaaggatagtgaagatgctgttctaaaagctaaagtagaggaattt
aacagaaaagtccgagagaatcctagggatattcaactgtggctggaatttgtgtctttt
caggatgaggtgatgaaaggacccagcctatacaccatcagtgagggagagcaagagact
agaagaaaatccctgaagctaattctggaaaagaaattgtccattttagagcgtgccatt
gaaagcaaccagaacagtgtggaactgaagcttgccaggctaaaactctgtacagaattc
tgggaaccatctactttgatcaaggagtggcagaaactgatttttttacaccccaataat
acagccctatggcagaaatacctcttattttgccagagccaatttagcacctttacagta
tccaaaattcacaatctgtatggaaaatgcctcagtaccctggccgcggtacaggatggg
agcatcttatctcatcctgcattgcctggaactgaggaagctatgttagcactctttctt
cagcagtgtcattttctcagacaagctggccacactgaaaaagcaatttctttgttccag
gccatgattgactttaccttcttcaaacctgacagtgtgaaagatcttcctaccagggga
caggtggaattctttgagcccttctgggatagtggagaacctcgggctggagaaaaggga
gcaagaggatggcgagcctggatgcaccagcaagaaaggggtggctgggtcgttgttaag
cctgatgaggatgaagatgaaccagaagaggacaatcaagaaataaagaacaagactctt
cccaagtggcaaatctggctcagtgttgagcattcccgtgaacaaaggcactggctaccc
tggcgccctgacaaaacaaaaaaacagactgatgaggattgtgatgacccagaaagacag
gtgttatttgatgatctcggggcatctctcataaagctttctagcttggaactaaaatac
cagctgattgattcatttctacaattcttgggagtcccttcaggctgtaatcttccaact
tcatgcctctatcttgccatggatgaaaatggtatttttgatgatgggctttctgatgaa
aagccattgacttttttcaacccatcattttctggggttaattgtgtaggtcacatggac
aaaatgaacagaaagggacaatggatgggtcactgcaaagaaggcgaggagttcatacag
aatatttttcatctcatattgcccctattttcagggaaagaaaaatctcatctctgcctc
tcgtggttgcagtatgaaattgctaaggtcacttggtatctgcaaactaaaaacaagaag
agactgaagtctcaagggaaaaaatgcaaaaaactggccaagaatctcctcaaggaacct
gagaaccgaaacaagttttgcctttggaaagaatatgcccatctggagtggttacttggc
aacacagaagatgccagaaaggtgtttgacaccgcccttagcatggcagggccagaagat
tcaagttctagactctatgacttaagcctgctttatgcatcactagaagtggagctgtcg
gggaacttggaaggggctgccacatccagagcagtgcatgttttaactaaactgatggag
aacgggccgtacggaccttatgctggacaggtgttagctgtgaacgttttgaaagcccgc
aaagcatatgagcacacacttgagaagcatttggatgcacctccttttaattgttctggt
cagctagttagcatggttggctgctttatgcttttccagtatttgaccatagggattaat
gctgctatgcagatatataagcaggtgtttgaaagacttaaagggtccatttcatccgaa
ttcacagggccaagtgcaaatatcagaaccccacatttgagcactgccctcgaagctgtc
acactgatgcacacaaatcttctcaggtatcacatgaaagtgagtgtgttccctttgaat
cctctgcgagaagcactttcagaggctttaaaattgtatccgggcaaccaggttctttgg
aggttgtatgtacagatccaaaacaaatctcataatgccagcaagacaagaagattcttt
gatatcatcataaggtctacccaatccctggagccgcggctgtttgccgtccaagctgag
aaaatgaggaaaaggctggtggaagctgttctgagagtagatgccggagaaatccattca
acaattcctgaaacaggtttatcaaatcgaatcaaagccttgtttgaaaatgcaattcag
agtgatcatggcagcaactgccctttattatggaggatgtatttgaattttctggtttct
ctaggaaacaaagaaagaagcaaaggtgtgttttacagagctctccagcactgtccttgg
gcaaaggtgttatatatggatgcagtggattatttccctgatcaaatccaggaaatcctg
gatctgatgactgagaaggaattaagagttcgcgtgccaatagaagaactagagcttctc
ttagaagattaa
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integrated database retrieval system
