Trichosurus vulpecula (common brushtail): 118829525
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Entry
118829525 CDS
T10126
Name
(RefSeq) LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 4-like
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
tvp Trichosurus vulpecula (common brushtail)
Pathway
tvp03022
Basal transcription factors
tvp05016
Huntington disease
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
118829525
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
118829525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tvp03021
]
118829525
03036 Chromosome and associated proteins [BR:
tvp03036
]
118829525
Transcription machinery [BR:
tvp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
118829525
Coactivators
SAGA/TFTC/STAGA complex
118829525
Chromosome and associated proteins [BR:
tvp03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
118829525
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAFH
Motif
Other DBs
NCBI-GeneID:
118829525
NCBI-ProteinID:
XP_036592406
LinkDB
All DBs
Position
8:complement(63233792..63235630)
Genome browser
AA seq
580 aa
AA seq
DB search
MIPSQMERMKPGAATIGQGRSAVISKSMTTSRNSQSRTTTTVETLNGSNVRNSPHSGSAV
AFAGTPVAPAADGAAAAAAAPSASSNTASQTSLLSTAASSSSSPVFSSIIASAGPPVALV
RPASAAPAAASVAAATQKGNALGIDSTLSVRSLSLPVAASGTAVGAGVSLQPSLGNSQLD
CCMPATATTQVLNSEAPKTVMMAVPQQQTLTSGGQSSTGRNAIIGQTRQGGSPNGGGTAN
RVAQSLPGIPTAATGGIGATSAPTLLARRLPPPAQNPTTIPVFQLSPGMVLIPSEHGQLL
LLPLHSLARMRAQAHAQFQPRNTRVPXPDTPTRGPPHQLSTLQPPATPLLARHETPTATV
QPVSQVQAMLQPTSTLPTSLVLQPQVVVGAAAQTAALATASSLQPGTPQRAGQLSAASTA
TMEDVQKCQHYLSTLIRLASSGKRSAETAAKVKELVQNLLDGKMEAEEFSSSLYQELNAS
PRPYLVPFLKSTLPALRLLSADSTSLIKLQKYIPKHLGFTLRLLWYTLKHLEFTPKLLGL
THKLLEFSPKLLGYTLRHLGFTPRLRGFILRLHGFILKLQ
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgatcccctcacagatggagaggatgaagccaggcgctgctactattggtcagggcaga
tcggcggtcatcagcaaatccatgacaacgtccagaaacagccaaagccgtaccaccacc
acggtggaaactttgaatgggagtaatgtgaggaactctccccattcaggaagtgctgtt
gcttttgctgggactccggttgctcctgctgctgatggtgctgctgctgctgctgctgca
ccttcagcttcttctaacactgcctcccagacttctttgctcagcactgctgcgtcctcc
tcttcctcacccgtcttctcctccatcattgcaagtgctggacctccggtggcactggtg
aggccagcaagtgccgcacctgctgcagcttctgttgctgcagctacccagaaggggaac
gctcttggcatcgattcaactctcagtgtgaggagtttgtctctccctgttgctgcttct
ggaaccgctgtgggtgctggagtttcacttcagccatccctggggaacagtcaacttgac
tgctgcatgccagccacagccaccacccaggtcctcaattcggaggcccctaaaactgta
atgatggcagtgcctcagcagcaaacactgacgagcggtggccaatccagcacagggcgc
aatgccatcattgggcaaaccaggcaagggggctctcctaatggtggtggcactgccaat
agagtggcccaaagtctgccaggaattccaacagccgctacaggtgggatcggagcaacg
tcggctcctacacttttagcacgccgtctgcctccaccagctcagaatcctacaactatt
ccagtgtttcagctatccccaggtatggtcctcattccaagcgaacatggacagttgtta
ctccttcccctacacagcttggcacggatgcgggcacaggcacacgctcagttccagcct
cggaataccagggtcccatgacccgacactcccacaaggggccctcctcatcagctatcg
actctgcagcctcctgcaacaccacttcttgcacgacacgagacaccaaccgccacggtg
cagccagtgtcccaggtacaggcgatgctgcagccaacttcaacattaccgacttctctc
gtactacagcctcaggtcgttgtgggcgctgctgcacagacagctgcattggcaacagcc
tcctctctacagcctggaacacctcagagggctggccagctctctgctgcctccacagca
acgatggaagatgtgcagaaatgccagcattatctgtctaccttaatccggctggcctca
tctggaaaacgctctgcagagacagcggcaaaggtcaaggagttagtccagaacttgctg
gatgggaaaatggaagcggaagagtttagcagcagcttataccaagaactgaatgcttca
cctcgaccttatctcgtgcctttcctgaagagcactttacctgccttgagactgttatca
gccgattccacatccttgatcaagctccagaagtacatccccaagcacctggggttcacc
ctcaggctcctgtggtacaccctcaagcacctggagttcacccccaagctactgggtctc
acccataagctcctggagttcagccctaagctcctggggtacaccctcagacacctgggg
ttcacccccaggctccgggggttcatcctcaggctccatggattcatcctcaagctccag
tag
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