Trichosurus vulpecula (common brushtail): 118829703
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Entry
118829703 CDS
T10126
Symbol
RPGRIP1
Name
(RefSeq) LOW QUALITY PROTEIN: X-linked retinitis pigmentosa GTPase regulator-interacting protein 1
KO
K16512
X-linked retinitis pigmentosa GTPase regulator-interacting protein 1
Organism
tvp Trichosurus vulpecula (common brushtail)
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tvp03037
]
118829703 (RPGRIP1)
Cilium and associated proteins [BR:
tvp03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
118829703 (RPGRIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPGR1_C
C2-C2_1
C2
Extensin_1
Decapeptide
Motif
Other DBs
NCBI-GeneID:
118829703
NCBI-ProteinID:
XP_036592506
LinkDB
All DBs
Position
8:complement(179670038..179740410)
Genome browser
AA seq
1714 aa
AA seq
DB search
MPGSYTLAWGKGLNQDEDNQEASNPSGRNYKRSLLLVDDTAGDMPTRKSDSKPLMTSTQG
KNVKSGTYLSKMSRKELEDSFSRLQEESLLVKELSWKQEDQIKRMRTKLLRLTAEGRTSG
YANRSSRNLKAEETIENLKDQVWQLKRHNEGLNNRLLMYKQQLQVQSSGRSPYSCVQHRI
NTARRQLHTSDAQIPAKFKRGPPTRPSYTAPPMYKETLMEEVRAEVPSEPVYTSSRVQIM
TNNTVKVDELELSPKSPEKMWSKDEDCEEKNSLEHAQLATEYRASIRENVERIQVMRLLH
ERSSALVAAKAQLADLQEVSESCMQQNQGMLSTSHNALLSQVDELNTELKEKNKKVVTLE
SQLADMSVLRITVREFQDRVEDLKRERNLLKGNHDRLLNNMLNSSNQPHWSTDLMKERLQ
QKVSHLQEQLDSEVAEKRKILLQLAKEQAENADLKQEVTQMLMKHKKEVELLKQKTTTTT
TTSSQSDPDFLQPSHQDYTKETQVQEEKNLSQAYNQMKVAHAETALELEKTRDMLLMQHQ
INQRYQDELEIVKTKADNSEREHKEEWEKLNQLLDLKNNRIQQLEGSFGNHRLTQLKDVA
YGTPRFPLRLEMPVHEGNMVDCLQLHQGENLFELHIHQAYLSPAALSQAGDSQLASFCTY
SFYDFEIHCTPLAMGPQPLYDFTSQYVVRTDYLFLNYLQGASSRINLHQTAALDHNTLAV
GWLRFDRVLETVEKVHGTAMLTGNNGKDFGTLDYWMRLKFPIAHCLQAYNKQLKAQAYLS
ANVLGARKAQPEESRSETFKHRNQLWVEIVRCCNLRSRHLGTQPSPYVIYQFFTFSDHDT
PIIPASNHPHFGDQARFPVHMTLELDXYLRQTVLPIYVFDDNESELGWFLGKVQIPLLPL
AQDKAIQGNFNLNNPVGRPNGSIELKLEWESHYLSPESLLKPAAQSVENDNMAPLSVENY
NEVPLSVEKHNEANLQVEDYNEALPSAENKETGLHIEHYNEAPLSVENDNEVPLSVENSE
ALLFEENSEAPLSAKKYNEANLSVEDYNEVDLSMESYNEANLHIEDYEESLPIENYKVNS
SKENDEANQSKQNCSKAKLSIENLDEAKLSIENLDEAKLPIENLDEDMLPIENLDEAKLP
IENLDEDMLPIENLDEAKLPIENLDEDMLPIENLDEAKLPIENLDEDMLPIENLDEAKLP
IENLDEDMLPIENLDEAKLPIENLDEAKLPIEKLDEAKLPIENLDEAKLPIENLDEAKLP
IENLDEAKLPIENCEEAKQSIENLDKDKLSIENCDEDKLSIENYDEHKPSIENCNEDKLS
KETCDEIKLSIENCDEDKLSKETCDEIKLSIENCDEDKLSIENCNEDKLSKENCDEAEQS
IENDNEMPLLVDYNKAPEPMENYNEKPIEIPTEEENILFHQKKKERKPQVENYLRIKYGR
KDDCCRGFRYIILDVLLFPLPSSNIIRIKGPTRKVNEKKLSGATGDAKKEPEECYPEVKQ
QESPSPDIATRPSEQADEVSETQTTDSDDVIVTPLSQKGSKTNSDKICIEIVSLAFDPEA
EVMSDESIQQVYVEYRFHDLPLSETETPVSLRKPRAGEDIHFHFNKVIDLNPVEHRDRRK
FLFSMLQEKNPEQRQLKFIVVSDPEEQKNECQEVGYAYLELWQILDTGRDILEQEIDIIN
PQDKATSIGKLKVSLQATDALQAIFKEMSEDMHL
NT seq
5145 nt
NT seq
+upstream
nt +downstream
nt
atgcccggcagctacactctggcctggggaaaggggctaaaccaggatgaagataaccaa
gaggcctcaaacccatcaggtaggaattataagaggtcattgcttcttgtggatgataca
gctggagacatgcctaccagaaagagtgactcgaagccgttgatgacatctactcaaggt
aagaatgtaaaatctggaacatacttgagtaagatgagtaggaaggagttggaggacagc
ttctctcgacttcaagaggagagcttgctggtgaaggagttatcttggaagcaagaggat
cagatcaaaaggatgaggacaaaattgttgagactcacagccgagggaagaactagtggg
tatgccaacaggtctagcaggaatctaaaggctgaagaaaccatcgaaaacctgaaggac
caagtgtggcagttgaagcgacacaatgagggactcaacaaccgtcttctcatgtataaa
cagcagctgcaagtccaaagctctgggcgctctccatatagctgcgtccagcatcggatc
aatacagcgaggcgacagcttcacacttctgatgctcaaattccagcaaagttcaaaaga
ggaccacctaccagaccaagttacacagcccctcctatgtacaaagagactttgatggaa
gaagtcagggctgaggtgcccagtgaacctgtgtacacatctagcagagtccagattatg
accaacaatactgtgaaggtggatgaactagaattgtcacccaagtctccagagaagatg
tggtccaaagatgaagactgtgaagagaaaaactccttagagcatgctcaattggccaca
gagtatagagcttccattagagagaacgtggaacggatccaagtgatgagactcctgcac
gaaagaagctctgcccttgtggcagcaaaggcacagctagcagatctgcaggaggtgagt
gagagctgcatgcaacagaatcagggaatgttaagtacatcccataatgctctgctatct
caagtggatgagctcaatacagaactgaaggaaaagaacaagaaggtggtgactctggaa
agtcagttggcagacatgtccgtcctacggattacagtgagagagtttcaggacagagtg
gaggatttaaaaagagaaagaaatctgctgaagggaaatcatgacagactcttaaataac
atgttaaacagcagcaatcagcctcactggagcactgacctcatgaaggaacggctccag
cagaaagtttctcatctacaagagcagctggattctgaggtagcggagaagagaaagatc
ttgcttcagttggctaaggaacaggctgaaaatgcggacctgaagcaggaagtcacccag
atgctaatgaaacataaaaaggaagtagaacttctcaaacagaaaactaccaccacgacc
actactagcagccaatcagatccagactttttgcaaccttcacaccaagattacactaaa
gaaacacaggtacaagaggaaaagaacctatctcaggcttacaatcagatgaaagtggca
catgcagaaactgccctagagttagagaagacgagggacatgctacttatgcagcatcag
atcaaccaacgttatcaggatgaactggaaattgtgaagacaaaagctgataatagtgag
agagagcacaaggaggagtgggagaagttgaatcaactcctggacctcaagaataatcga
attcaacagctggaaggtagttttggaaaccacagacttacacagctcaaagatgtggct
tatggtaccccgaggtttccattacgtctggaaatgccagtccatgaggggaatatggtg
gactgtcttcagctgcaccagggagaaaacctttttgaactgcatattcaccaggcctac
ctgtcacctgcagccctgtcccaagctggagactcgcagcttgcctccttctgtacctat
tccttctatgattttgaaattcactgcaccccactggctatggggcctcaacctctctat
gatttcacctcccagtatgtggtgagaacagattaccttttcctaaactatttacaaggg
gcttcatcccgaattaacctccaccagactgcagctcttgaccacaatacccttgcagtt
ggctggcttcgttttgacagagtgctagagacagtggagaaggtccatggcactgccatg
cttactggaaataatggaaaagactttgggacactggattactggatgaggctgaaattc
cccatagcacactgcctacaggcatacaacaagcaattgaaagctcaagcatacctgtct
gctaatgtgcttggggccaggaaggctcagccagaggagtccagatcagagactttcaag
cataggaatcagttgtgggtggaaatcgtcaggtgctgcaacctccggagccgacatctg
ggtacacagcccagcccgtatgtcatctaccaattcttcaccttttctgaccatgacaca
cccatcattcctgccagcaaccatccccactttggtgatcaggccagattcccagtgcac
atgaccttggaactggattgatatctcaggcagacggtcctgcctatatatgtgtttgat
gacaacgagtccgaactaggctggttccttggcaaagttcagatacctctgctgcctctt
gcacaagataaagccattcaaggtaacttcaacctcaacaatcctgtggggagacccaat
gggtccattgaactgaaattggagtgggagtctcattacctatctccagagagtttactg
aagccagcggcccagtctgttgaaaatgacaacatggcacccctgtctgtggaaaattac
aatgaagtgcccttatctgtagaaaaacacaatgaggcaaacctgcaagtagaagattac
aatgaggcactcccctctgcagagaacaaagagacaggcttgcatatagaacattacaat
gaagcaccgctgtctgtggaaaatgacaatgaggtgcccctgtctgtagaaaattctgag
gcactcctgtttgaagaaaattctgaggcacccctatctgcaaaaaagtacaatgaggca
aacctgtctgtagaagattacaatgaggtggacttgtctatggaaagttataatgaggcg
aacctgcatatagaagattacgaggaaagcctgcctatagaaaattacaaggtaaactca
tccaaagaaaatgatgaagcaaatcagtctaaacaaaactgcagcaaggccaagctgtct
atagaaaaccttgatgaggccaagctttctatagaaaaccttgatgaggccaagctgcct
atagaaaaccttgacgaggacatgctgcctatagaaaaccttgatgaggccaagctgcct
atagaaaaccttgacgaggacatgctgcctatagaaaaccttgatgaggccaagctgcct
atagaaaaccttgacgaggacatgctgcctatagaaaaccttgatgaggccaagctgcct
atagaaaaccttgacgaggacatgctgcctatagaaaaccttgatgaggccaagctgcct
atagaaaaccttgatgaggacatgctgcctatagaaaaccttgatgaggccaagctgcct
atagaaaaccttgatgaggccaagctgcctatagaaaaacttgatgaggccaagctgcct
atagaaaaccttgatgaggccaagctgcctatagaaaaccttgatgaggccaagctgcct
atagaaaaccttgatgaggccaaactgcctatagagaactgcgaggaggcaaaacagtct
atagaaaaccttgacaaggacaagctgtccatagaaaactgtgatgaggacaagctgtct
atagaaaactatgacgagcacaagccgtctatagaaaactgcaatgaggacaagctatct
aaagaaacctgcgatgagatcaagctgtctatagaaaactgcgatgaggacaagctatct
aaagaaacctgcgatgagatcaagctgtctatagaaaactgcgatgaggacaagctgtct
atagaaaactgcaatgaggacaagctatctaaagaaaattgcgacgaggcagaacagtct
atagaaaatgacaatgagatgcccctgttggtagattataataaagcacctgaacctatg
gaaaattataatgagaaacctatagagattccaactgaagaagaaaacattttatttcac
cagaaaaaaaaggaaaggaagcctcaggttgaaaactatttgaggataaaatatggcagg
aaagatgattgctgtcgtggcttcaggtacatcattttggatgtccttctcttccccctc
ccatcttccaacatcataagaatcaaaggacccaccaggaaggtgaacgagaagaaattg
tcaggtgctactggtgatgcaaaaaaagagccagaggaatgttacccagaagtcaagcag
caagagtctccatctcctgatattgctactcgaccttctgaacaagctgatgaagtcagt
gaaacgcagacaacagacagcgatgatgtcatagtgacccccctgtctcagaaagggtct
aagacaaattcagacaagatttgcattgaaattgtgtccctggcctttgaccccgaagcc
gaagtgatgtctgatgagagcatccagcaggtgtatgtggagtacagatttcatgatctg
cccttgtcagagactgagacacctgtatcccttcggaaacccagggcaggggaagatatc
cactttcatttcaacaaagtgatagacctgaacccagtggaacacagggaccgaagaaag
tttctcttttctatgttgcaagaaaaaaatcctgagcagaggcaactgaaattcatagta
gtgagtgatcctgaggaacaaaagaacgaatgtcaagaagtaggctatgcttacttggaa
ctgtggcagattctcgatacaggaagagacattttagaacaagagatagacattatcaac
cctcaggacaaagccacctccattggaaaacttaaagtgtcccttcaagcaactgatgcc
cttcaggccattttcaaggagatgagtgaagatatgcatttgtga
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integrated database retrieval system
