Trichosurus vulpecula (common brushtail): 118829979
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Entry
118829979 CDS
T10126
Symbol
ERCC6
Name
(RefSeq) DNA excision repair protein ERCC-6
KO
K10841
DNA excision repair protein ERCC-6
Organism
tvp Trichosurus vulpecula (common brushtail)
Pathway
tvp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
118829979 (ERCC6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tvp03036
]
118829979 (ERCC6)
03400 DNA repair and recombination proteins [BR:
tvp03400
]
118829979 (ERCC6)
Chromosome and associated proteins [BR:
tvp03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
118829979 (ERCC6)
DNA repair and recombination proteins [BR:
tvp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
118829979 (ERCC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
WHD_Rad26_CSB
DEAD
Motif
Other DBs
NCBI-GeneID:
118829979
NCBI-ProteinID:
XP_036592737
LinkDB
All DBs
Position
8:complement(74084457..74197443)
Genome browser
AA seq
1490 aa
AA seq
DB search
MPNETTQRLGQTEEKNYLNGQFFSNAEETAFGPEDGATLDKMEENFTSSACDDRPSTSSV
AGVFEVPRKGQPLLHINRQQIQSVEHSAQAIELKGLGVDVYDQDVLEQGVLRQVDNAINE
ANRAAQLAEAEKEYHSVLDDLRSCTTSLKQIDAIIEHLSPQALNNKDINRKLDSVKRQKC
NKEKQLKKIKAKQKRLQAILAGTERNIEAHLVDLEEDEEPGPSSLGSMLMPVQETEWEEL
IRTGQMTPFGTRIPQNQEKKPRKLMLNEASGFEKYLADQAKLSFERKKLCLQKKKKKIQT
SVDSNVIPTSDKQEKNRTNGKQLKTDKRLKKHIKKLQRRAVQFQGKVGFLKEKKPLEPEK
SKYDQGDESEDSEYIPEDELLYTEEEDEEEELALHTTNKRDHKLKSLSKHRKQQNKIPTE
EIDDDYLPSSGEEEPMGRNGKIKRCRDDGDEDCYKQRLRRWNKRRLEEREQHRKAEEESE
ESDAEFDEGFRVPGFLFKKLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAFLA
GLSYSKIRTRGSNYRFEGLGPTVIVCPTTVMHQWVREFHTWWPPFRVAILHETGSYANKK
VKLIREIARCHGILITSYSYIRLMQDNINNHDWHYVILDEGHKIRNPNAAVTLACKQFRT
PHRIILSGSPMQNNLKELWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTA
YKCACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQRKVYQNFIDSKEVYR
ILNGEMQVFSGLVALRKICNHPDLFSGGPKIIKGIPDDELEEADQFGYWKRSGKMIVVES
LLKIWHKQGHRVLLFSQSRQMLHLLEVFLRAREYSYLKMDGTTTIASRQPLITRYNEDTS
IFVFLLTTRVGGIGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAG
TIEEKIYHRQIFKQFLTNRILKDPKQRRFFKSNDLYELFTLSSPDESQGTETSAIFAGTG
SDVQAPKQHLKRKFHSSSPVADREGVHQADVSPECSTLSDANISEAIAGSSQGKYKDKGT
GVNLGTFNQSSLSMESVEAHLREDKCAHMNTFSMPDEPSKTIMTLGNGENLNSSRITENF
KTTGGEGLDTKQDLPCEKRSLQAKLDHSLGSEQTENRFCKHKSKTKHHLVEGKETRKHKG
QKQNSNASRHSKDAKFEGTRIPYLVKQKQYQKHDDEKEENEQKNDDYVLEKLFKRSVGVH
SVMKHDAIMEASSPDYVLVEAEANRVAQDALKALKMSRQRCLGAVSGVPTWTGSNGLSGA
PAGGKRFGQKRNPSLLAPQSSSKSTKERCQNADVKKDEKSATGTHFSGKIEDGESSSGAL
ASSSLLAKMRTRNHLILPQRTENENTNFQQASAPLPTATEHDDLLVEMRNFIAFQARTDG
QASTQEILQEFESKLSTSQSCVFRELLRNLCTFHRGLNGEGVWKLKPEFC
NT seq
4473 nt
NT seq
+upstream
nt +downstream
nt
atgccaaacgagactactcaacgcttgggtcaaactgaagagaaaaattatttaaatggc
cagtttttcagcaatgctgaagaaacagccttcggtccagaagatggtgcaactcttgat
aaaatggaagaaaatttcacctcttctgcttgtgatgataggccatccacttcttcagtg
gctggtgtgtttgaagtcccaaggaaaggacagccattgttgcatataaacagacagcaa
attcagtctgtggagcacagcgctcaagcaattgaactcaaaggtttgggagttgatgtc
tatgaccaagacgtattagagcaaggagtgcttcgacaggtagataatgcaattaatgaa
gctaacagggcagctcagctagctgaagcagaaaaagaataccattcagttttagatgat
ctccggtcatgtacaacatctctaaagcaaattgatgcaattattgagcatcttagtcct
caagctctcaacaacaaagacatcaacagaaaactagattctgtaaagagacagaaatgt
aacaaggaaaaacaactaaagaagattaaagccaaacaaaaacgtcttcaagccatcctt
gctggaacagagagaaatattgaagcacatcttgtggatttagaagaggatgaagagcct
gggccatcatctcttgggagtatgctcatgccagttcaggaaactgaatgggaagagctc
attcggactggccagatgaccccttttggcacacggatccctcagaatcaagagaaaaag
cctagaaaattaatgcttaatgaagcatcaggctttgaaaaatatttggcagatcaggca
aaattatcatttgaaaggaagaagctatgcctacagaaaaaaaagaagaaaattcagact
tcagttgattcaaatgtgataccaacttcagataaacaagaaaagaacaggaccaatggg
aagcaactgaaaacagataagcgtttgaaaaaacatatcaagaaacttcaaaggagggct
gttcagttccagggtaaagtaggatttctaaaggaaaagaaaccattggaaccagagaag
tccaagtatgatcaaggagatgaaagtgaagattcagagtatatacctgaagatgaactt
ctctacactgaagaggaggacgaagaggaagaactggcactccatactacaaataagcgt
gatcataagctgaaatctttatctaagcacaggaagcagcagaataaaattccaacagag
gaaattgatgatgactatcttcccagctccggagaagaagaacccatgggaagaaacggc
aaaatcaagagatgccgagatgatggagatgaagattgctataaacaacggttaaggagg
tggaacaaacggagattggaagagagagagcaacatagaaaggctgaagaagaatctgag
gaaagcgatgctgaatttgatgaaggttttagagtgccaggttttttgttcaaaaagctt
tttaagtaccagcagacaggtgttaggtggctgtgggaattgcactgccagcaggcagga
ggaattctgggagatgagatgggattgggcaagaccatccagataattgccttcttggca
ggtctgagctacagcaagatcaggactcgtggttcaaattacagatttgagggattgggt
ccaactgtaattgtgtgtccaacaacagtaatgcatcagtgggtgagagaatttcacact
tggtggcctccattcagagttgcaattttacatgaaactggatcatatgcaaacaaaaag
gtgaaactcatccgagaaattgcaagatgtcatggaattttgatcacttcatattcctat
attcgattgatgcaagataatattaacaatcatgactggcattatgtgatcttggatgag
ggacacaaaatccgaaacccaaatgctgcagttacacttgcttgcaaacagttccgtact
cctcatcggattatcttgtctggatctcctatgcaaaataacctcaaagaactatggtct
ctctttgactttgtcttcccgggaaaactgggaacattgccagtattcatggaacaattt
tctgttccaattaccatgggagggtattcaaatgcttcccctgtacaggttaaaactgct
tataaatgtgcatgtgttttacgagataccataaacccatatctactgcgtagaatgaag
tcagatgtaaaaatgagcctttcattgccagataaaaatgaacaggtcttgttttgccgt
ttgacagatgagcaacgtaaagtatatcagaacttcatagattccaaagaagtctacagg
attcttaatggagaaatgcaggttttttcaggacttgtagcattacgaaaaatatgcaac
caccctgatctcttctctggaggtcccaagattataaaaggtattccagatgatgaatta
gaggaagctgaccagtttggctactggaaacgctctggaaaaatgatagtggttgaatct
ttgctaaaaatatggcacaagcagggtcatcgagtgttactgttttctcaatcaagacag
atgctacatctacttgaagtatttcttagagcacgagaatattcctacctcaaaatggat
ggtactactacaatagcttcgagacagccacttatcacgagatacaatgaggatacttcc
atatttgtatttcttcttaccactcgtgtgggtggtataggagtcaacttgacaggcgca
aatagagttattatctatgaccctgactggaaccccagcacagatacacaggctcgagag
cgtgcttggagaataggccagaagaaacaagtgactgtttataggctccttactgcaggt
accattgaagaaaagatttatcacaggcaaatcttcaagcagtttttaacaaatagaatc
ctgaaagatcccaaacaaagacgttttttcaagtccaatgatctctacgagctgtttact
ctcagtagtcctgatgaatctcaaggcactgaaaccagtgctatttttgcaggaactggt
tcagatgttcaagcacctaaacagcatttgaaaagaaaatttcatagctcctctcctgtt
gctgacagagaaggtgtgcaccaagcagatgtttctccagaatgcagcacattatctgat
gccaacatttctgaagccattgctggttcatctcaaggaaaatataaggataaaggaacg
ggtgtaaatttaggaacttttaaccaaagtagcctttcaatggagagtgttgaagctcat
cttagagaagataagtgtgcacatatgaatacattttccatgccagatgaaccatcaaag
actatcatgactttagggaatggggaaaatttaaactcttcacgtatcactgaaaacttc
aagacaactggtggtgaaggtttagatacaaagcaagaccttccttgtgagaagagaagc
ttacaggccaaactggatcacagtcttgggagtgagcagactgagaaccgcttctgtaaa
cacaagtcaaaaacaaagcatcaccttgtggaaggaaaggagactcgaaagcacaaaggg
cagaagcagaactctaatgcatccagacattccaaagatgccaagtttgaaggaacacgc
atcccatacctggttaaacaaaaacagtaccagaagcatgatgatgagaaagaggaaaat
gagcaaaaaaatgatgattatgttctggaaaagcttttcaaaagatcagtaggcgttcac
agtgtcatgaaacacgatgctattatggaggcttccagtccggattatgtgttagtggaa
gcagaggcaaatcgagtagcccaggatgcattgaaagcactgaagatgtctcgtcagcgg
tgtttgggtgctgtctctggtgtgcccacgtggacaggcagtaatggtctgtcaggtgca
ccagctggaggaaagagatttgggcagaaaaggaatcctagcttgcttgctccacagtct
tcttcaaagtcgacgaaagagaggtgtcagaatgctgatgtgaagaaagatgaaaaaagt
gccactggaacacattttagtgggaaaatagaagatggagaatcttcatctggtgcttta
gcttcatcatcactgttagctaaaatgagaactagaaaccatcttattttgccacagaga
acggaaaatgaaaataccaactttcagcaggcttctgccccactgcccactgcaacagag
catgatgaccttttggtagaaatgaggaacttcatagccttccaggcccgtactgatgga
caggcaagcacacaagagatactgcaggaatttgaatccaagttatccacatcacagtct
tgtgtattccgagaactgctgagaaatctctgcacgtttcatcgaggtttgaatggtgaa
ggtgtatggaagctgaagcctgagttctgctga
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integrated database retrieval system
