Trichosurus vulpecula (common brushtail): 118830208
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Entry
118830208 CDS
T10126
Symbol
TRUB1
Name
(RefSeq) probable tRNA pseudouridine synthase 1 isoform X1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
tvp Trichosurus vulpecula (common brushtail)
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tvp03016
]
118830208 (TRUB1)
Enzymes [BR:
tvp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
118830208 (TRUB1)
Transfer RNA biogenesis [BR:
tvp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
118830208 (TRUB1)
Prokaryotic type
118830208 (TRUB1)
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Pus10_C
AAA_22
Motif
Other DBs
NCBI-GeneID:
118830208
NCBI-ProteinID:
XP_036593009
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Position
8:complement(99197342..99241644)
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AA seq
369 aa
AA seq
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MMAACEAVAATARVAKATERAEEAVKAAITGTAASAAVSAKAAVPSAGGKAAAAASAVLT
ETAAATTAAAGAAGAGRSAAAAKLLSLSGVFAVYKPKGPTSAELLNQLKEKLLAEAGMPP
QDGNKRKKQALKIGHGGTLDSAATGVLVVGIGKGTKMLTSMLSGSKKYIATGELGKATDT
LDSTGKITEEKPYDQIKQEDIEGILQKFTGNIMQVPPLYSALKKDGQRLSTLMKKGEIVE
AKPARPVTVYSLSLQKFQPPLFTLDVECGGGFYIRSLVSDIGKELSSCATVQELTRTKQG
PFTLEEHALREDKWTIDGIAQSLEHCMPLLSVEPSVKKLKTEDSKVQAVSSEDKTISQVK
EKDGVIGTS
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgatggccgcctgcgaggcggtggcagcaacagcgagagtggcgaaagcgacagagagg
gccgaagaggcggtgaaagcagccatcacggggacggccgcgtcggcggcggtctcggcc
aaggccgcggtgccgtccgccggggggaaggcggcggcggcggcctcggctgtcctgacg
gagacggcagccgccacaacggccgcggcgggagcagcgggggccggccgctcggcggcg
gccgccaagctgctgtccctgagcggcgtgttcgccgtgtacaagcccaagggccccact
tcggccgagctgctgaaccagctgaaggagaaactcctggcagaagctggtatgcctcct
caagatggaaacaagaggaagaaacaggcattaaaaattggtcatggaggaactttggac
agtgctgccacaggagttctggtggttggaattggaaaaggaacaaaaatgttgaccagt
atgttatcaggttctaagaagtatattgctactggagaattggggaaagctactgataca
ctggattcaacagggaaaattacagaagaaaaaccttacgatcagataaagcaagaagat
attgaaggtattctccagaaatttacaggaaatataatgcaagtgccccctctctattct
gctttaaagaaagatggacagagactttcaactttgatgaagaaaggtgaaatagtagag
gcaaaacctgccagaccagtcacagtgtatagcctctcccttcaaaaattccagccacct
ttatttaccttagatgttgaatgtggaggaggtttttatatcagaagcttggtcagtgac
attggcaaagagctttcttcctgtgccaccgtgcaagaactgacccgaactaaacaggga
ccatttacattagaggaacacgcccttcgtgaagacaaatggacaattgatggaatagca
caatccctagagcactgcatgcctcttctctcagtagaaccatctgttaaaaaattaaaa
actgaagattctaaagtacaagctgtgagctctgaagacaaaacaataagtcaggttaag
gaaaaagatggagtgattggaacatcttaa
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