Trichosurus vulpecula (common brushtail): 118830297
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Entry
118830297 CDS
T10126
Symbol
BLM
Name
(RefSeq) Bloom syndrome protein
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
tvp Trichosurus vulpecula (common brushtail)
Pathway
tvp03440
Homologous recombination
tvp03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
118830297 (BLM)
03460 Fanconi anemia pathway
118830297 (BLM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tvp03032
]
118830297 (BLM)
03400 DNA repair and recombination proteins [BR:
tvp03400
]
118830297 (BLM)
Enzymes [BR:
tvp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
118830297 (BLM)
DNA replication proteins [BR:
tvp03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
118830297 (BLM)
DNA repair and recombination proteins [BR:
tvp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
118830297 (BLM)
Bloom's syndrome complex (BTR)
118830297 (BLM)
FA (Fanconi anemia) pathway
118830297 (BLM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BLM_N
BDHCT_assoc
DEAD
BDHCT
Helicase_C
RecQ_Zn_bind
RQC
HRDC
ACT_ACR9_C
Motif
Other DBs
NCBI-GeneID:
118830297
NCBI-ProteinID:
XP_036593125
LinkDB
All DBs
Position
8:122604781..122660305
Genome browser
AA seq
1444 aa
AA seq
DB search
MAVLPQNNLQQQLERHSAKEIQNKLNVLKPKSTGFTFKKKIPSSNSVTQTLVLSEKDVNV
TETFPLSKPFHNTKNQQTSINAFSERTSKGQIQKFCSNQILSDSSKNTHETSCSLQPPTK
ESSGNKELCKDSKKLELNSSFDSAIFINDWDDIDDFDTSGNSKTFTTPSRTRCTKLSNTQ
RSKGDKNNLSKTQTCKANGKKVDPELLNFPSGKSRQAELTKKELPASEELSSPVICLDED
SISEEFKNEDIQESHTLKTQPGNERDDNEKKKCPEEVELHTVDESLGADSEEFNEDDFDI
DFIPPSPEEGVFSSTLKCLSTLKEAPSICDGKKNCTKLSNYFSSESEKTTSPQPIQETST
KYDGKLLSLQQQLFHVMEDICSLVDTIPSYQLQGLDCGNKLLQHRDLRRKLLADANSNKN
DTSLPPLNWIYQPNSQDLSVNGKTAFSSLHSFQKGKSPFTGNLVREFKSLHLPSNPVSTT
DCQGNFLDKTTRTFPNLDVSTGMHSPQRATPEKSELSSAKTNVSERILLSSQSPEPFVIS
NSAEISKTEEKYKRSQFLGNFLTSTAIKDQNKHINLVNDLRSNNFSETQDIDIFDIDDFD
DYDWENPSYNSVEEESSKNIYLPIREGQTIKSFSERTPKTKTNSLSVAPANQNRGISIQN
CPDKLVQNRPSRNPEHERFRSLDFPHSKEMMKIFHKKFGLHHFRTNQLEAINAVLLGEDC
FVLMPTGGGKSLCYQLPACVSPGVTIVISPLRSLIVDQVQKLTSLDIPATYLTGDKTDSE
AANIYLQLSKKDPIIKLLYVTPEKVCASNRLISTMENLYERKLLARFVIDEAHCVSQWGH
DFRQDYKRLNMLRQKFPSVAMMALTATANPRVQKDILTQLKILNPQIFSMSFNRHNLKYS
VLPKKPKKVAFDCLEWIRKHHPHDSGIIYCLSRRECDTMADTLQKDGLAALAYHAGLSDS
ARDEVQHKWINQDGCQVICATIAFGMGIDKPDVRYVIHSSLPKSVEGYYQESGRAGRDGE
MSHCLLFYSYHDVTRLKRLILMEKDGNSHTRQTHFNNLYSMVHYCENIIECRRLQLLSYF
GENEFNPNFCKEYPDVTCDNCCKKKDYKTRDVTEDVKNIIKFVQEHDSLNGERNKRNMGS
CGRFTLNMLVDIFLGSKTAKTQSGIFGKGAAYSRHNAERLLKKLILDKILDEDLYINAND
QAIAYVMLGEKAQVVLDGYLKVDFQETENFSGIRKQKALVAKISQREELVKKCLGELTEV
CKGLGKAFGVHYFNIFNTVTLKKLAESLSSDPEVLLQIDGVTEDKLEKYGAEVISVLQKY
SECTLPGNDNDPLRLSPHDAERNEEETQVSSHYFSNKTKNERKRRRLPTFQKSKRRKTSH
GSQQSNSRRGCRKTSSKSKSSNAFGSNPASYSSQVTSGASRKLGIMAPPKPKNRPFLQPS
YSFL
NT seq
4335 nt
NT seq
+upstream
nt +downstream
nt
atggctgttcttcctcagaataatctgcaacagcagctagagcgtcactcagccaaagaa
attcaaaataaattaaatgttctgaaacccaaatctacaggtttcacttttaaaaagaaa
ataccttctagcaacagtgtaactcaaactcttgtgttaagtgagaaggatgttaatgtt
actgagacctttcctctcagtaagcctttccacaataccaagaaccagcagacaagtatc
aatgccttctcagagagaacttcaaaaggacaaatccagaagttttgttcaaaccagata
ttatcagattcttcaaagaacacccacgaaacttcatgtagtttacaacctcctacaaaa
gaaagctctggcaacaaggaattgtgtaaagattctaagaaattagaattgaattcttca
tttgactctgccatattcatcaatgactgggacgacatagatgactttgatacttctggg
aattcaaaaactttcactacaccctctagaactcgttgtacaaaactaagtaatactcag
agatcaaaaggggataaaaataacttatctaaaacacagacatgtaaagcaaatgggaag
aaggtcgatccagagcttttgaattttccatctggtaaaagcagacaagcagaattgact
aaaaaagagttgcctgcatcagaagagctaagcagtcctgtgatttgccttgatgaggat
tccatttccgaagagtttaaaaatgaagatattcaagaaagccatactttgaaaactcaa
ccgggcaatgaaagagatgacaatgaaaagaagaaatgtcctgaagaagttgagctacat
actgttgatgaatctttaggtgctgactctgaggaatttaacgaagatgattttgatata
gattttattccaccttctccagaagaaggagtgttttcttctactttgaagtgccttagt
actctgaaggaggcaccttccatctgtgatgggaaaaaaaattgtactaagctatcaaat
tacttttcatcagaatctgagaaaacaactagcccacagccgatacaggagaccagtaca
aaatatgatggtaaactgttaagtttgcaacaacagctttttcacgtgatggaggacatc
tgttcattagttgatactattccttcttatcaacttcaaggcttggattgcggaaacaaa
cttctccagcatcgagatctcagaagaaaactcttagctgatgcaaattccaacaaaaat
gatactagtcttccacccttgaattggatataccagcctaattcacaggatctgtctgta
aatggcaagacagctttttcctctctgcattcatttcaaaagggtaaatctcctttcaca
gggaatttagtaagagaatttaaatctctacaccttccttctaatcctgtctctactact
gattgtcaaggaaattttcttgataaaactacaaggacgtttccaaatctggatgtttca
acagggatgcacagcccacaaagagctactccagaaaagtcagagctgtcatctgccaag
acgaatgtctctgaaagaatattactcagttcccaatcaccagaaccctttgttattagc
aattctgctgaaatatcaaagacagaagagaaatataaaaggtctcaattcctaggcaat
tttctcacaagcactgctataaaagatcagaataaacacattaatttggttaatgacctg
agaagtaacaatttttctgaaacccaggatattgatatttttgatatagatgattttgat
gattatgactgggaaaacccaagttataattcagtagaggaagaatcatccaaaaatata
tatctgcctattcgggaaggtcagacaattaaatcattttcagaaagaactcctaagacc
aagacaaactctctctcagtggcacctgctaaccaaaatagaggcatctcaatccagaat
tgccctgataaattggtacaaaatagaccatccagaaatccagaacatgagcgtttcaga
agtcttgattttccacattcaaaagaaatgatgaagatttttcacaaaaaatttggcctg
catcattttcgtacaaatcagctagaggcaatcaatgctgttctgcttggtgaagactgt
ttcgtcctaatgcccactggagggggtaaaagcctgtgttaccagctaccagcttgtgtt
tctcctggagttactattgtgatctctccactgagatcactaatagtagatcaagtgcaa
aagctaacttctttggatattccagccacttatctaacaggtgacaagacagattctgaa
gctgcaaatatttatctccaattgtcaaaaaaagatccaatcataaaacttctgtatgtt
actccagaaaaggtctgtgcaagtaacaggctgatttctactatggaaaatctgtacgag
agaaaattattggcacgttttgtcattgatgaagcacactgtgtcagtcagtggggacat
gattttcgtcaagactacaagagattgaatatgcttcgacagaaatttccttctgttgca
atgatggctctcacagccactgctaaccccagggtgcagaaggatatcctaactcagttg
aagattctcaaccctcaaatatttagcatgagttttaacagacataatctgaagtatagt
gtgttgcccaaaaaaccgaaaaaggtggcatttgattgcttagaatggatcagaaaacat
cacccacatgactcagggataatttactgcctttccaggcgtgaatgtgacacgatggct
gacaccttacagaaggatggtctcgctgcccttgcttatcatgctggcctcagtgattca
gctagagatgaagtacagcacaagtggattaatcaagatggctgccaggttatttgtgca
acaattgcttttggcatggggattgacaaaccagatgtgcgttatgttatccattcttct
ctccctaaatcagtagaaggatattaccaggaatctggcagagctggaagagatggtgaa
atgtctcactgtttgcttttctacagctaccatgatgtaaccagacttaagagacttatt
cttatggagaaagatggaaacagtcatacacgacagactcacttcaacaatctgtatagc
atggtacattactgtgaaaacataatagaatgccgaagactccagcttttgtcatacttt
ggagaaaatgagtttaatcctaatttttgcaaggagtacccagatgtgacttgtgataac
tgctgcaaaaagaaggattacaagacaagggatgtgacagaagatgtgaaaaacatcata
aagtttgttcaagagcatgattcattgaatggagaaagaaataaaaggaatatgggctct
tgtggaagatttactctaaacatgctggttgatattttcctggggagtaaaactgctaag
actcaatcaggcatatttgggaagggagccgcttattcaagacataatgccgaaagactt
ttgaaaaagctaatacttgacaaaattttggatgaagacttgtacatcaatgctaatgac
caagcaattgcctatgtgatgttaggcgagaaagcccaggtggttctggatgggtattta
aaggtggactttcaggaaactgagaatttcagtggtataagaaagcaaaaggctttagtg
gcaaagatatcccagagagaagagctagttaagaagtgcctgggagaacttacagaggtc
tgcaaagggctcgggaaggcttttggtgtccattacttcaatatatttaatactgttact
ctaaaaaagcttgcagagtctttatcttctgatcctgaggttttgcttcaaattgatggt
gttacagaagacaaactggaaaaatacggtgctgaagtgatttcagtcctccagaaatac
tctgagtgtacattgccaggtaatgataatgatcccctacggttaagtcctcacgatgcc
gaaagaaatgaagaagaaacccaagtatcttctcactatttttcaaataaaactaaaaat
gagaggaagaggagaaggttgccaacctttcaaaagtccaaaaggagaaaaacaagccat
gggagccagcaatcaaattcaaggaggggatgcagaaagacatcttctaaaagcaaatcc
tcaaatgcatttggatccaatccagcatcttatagttctcaagtaacttcaggagccagt
agaaaattagggattatggctccaccaaagcctaaaaatagaccattccttcaaccatca
tattcatttttgtaa
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integrated database retrieval system
