Trichosurus vulpecula (common brushtail): 118830311
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Entry
118830311 CDS
T10126
Symbol
APEX1
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
tvp Trichosurus vulpecula (common brushtail)
Pathway
tvp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
118830311 (APEX1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tvp03400
]
118830311 (APEX1)
Enzymes [BR:
tvp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
118830311 (APEX1)
DNA repair and recombination proteins [BR:
tvp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
118830311 (APEX1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-GeneID:
118830311
NCBI-ProteinID:
XP_036593140
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All DBs
Position
8:complement(181466543..181468707)
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AA seq
320 aa
AA seq
DB search
MPKRGKKEVSKKDGISEEEPETKEPEPKKTKKGAKEKEAAGEGSATYEDPPDQQTSPSGK
PSTLKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSESKLPPELQDLPGLTYQY
WSSPADKEGYSGVGLLSRQCPLKVTFGIGEEEHDQEGRVIVAEFEAFVLVTAYVPNAGRG
LVRLEYRQKWDEAFRKFLKGLSAKKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQ
GFGELLQAVPLTDSFRHLYPEAAYAYTFWTYMMNARAKNVGWRLDYFLLSQSLLPALCDS
KIRSKALGSDHCPITLLLAL
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgccaaagcgagggaagaaggaagtatctaagaaggatggaatcagtgaggaggagcca
gagactaaagagcctgagcctaagaagactaagaagggtgcaaaagagaaggaggcagca
ggggaaggatctgccacatacgaggaccccccagaccagcagacctcacctagtggcaaa
ccttctacactcaagatatgctcctggaatgtggatgggcttcgggcctggatcaagaaa
aagggtctggattgggtaaaggaagaagctcctgacatcctttgcctccaagaaaccaaa
tgttcagagagcaagttgccacctgagcttcaggacctgcctggacttacctaccagtac
tggtcctcacctgctgataaagaaggatacagtggtgttggtctcctttcccgacagtgc
ccactcaaagttacctttggcattggtgaagaggagcatgatcaggagggccgggtgata
gtggctgagtttgaggcatttgtgctggtgacagcatatgtgcctaatgcaggacgaggg
ctggttcgactggaatatcgacaaaaatgggatgaggcatttcgcaagtttttgaaaggg
ctaagtgccaaaaagcctcttgtgctctgtggggacctcaacgtggcccacgaagagatt
gacttgcgcaatcccaaggggaacaagaaaaatgctgggtttaccccacaggaacgccaa
ggttttggggagctgctccaggcagtgccactgactgacagtttccgtcatctctatcca
gaggcagcttacgcttatactttttggacctatatgatgaatgcccgagccaagaatgtg
ggctggcggcttgactatttcttgttgtctcagtccttgctccctgccctatgtgacagt
aagatccggtccaaagccctaggtagtgaccattgtcctatcaccctcttgctggcattg
taa
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