Trichosurus vulpecula (common brushtail): 118830868
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Entry
118830868 CDS
T10126
Symbol
ATXN2L
Name
(RefSeq) ataxin-2-like protein isoform X1
KO
K23625
ataxin-2
Organism
tvp Trichosurus vulpecula (common brushtail)
Pathway
tvp05014
Amyotrophic lateral sclerosis
tvp05017
Spinocerebellar ataxia
tvp05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
118830868 (ATXN2L)
05017 Spinocerebellar ataxia
118830868 (ATXN2L)
05022 Pathways of neurodegeneration - multiple diseases
118830868 (ATXN2L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tvp03019
]
118830868 (ATXN2L)
Messenger RNA biogenesis [BR:
tvp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
118830868 (ATXN2L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SM-ATX
LsmAD
PAM2
DUF5415
Motif
Other DBs
NCBI-GeneID:
118830868
NCBI-ProteinID:
XP_036593805
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All DBs
Position
9:78229759..78253967
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AA seq
1048 aa
AA seq
DB search
MLKPQPPQPSQPQQTPIQQPAPARRPPGGTSPPNGSLGGTPASASAPGPPTAASPGLGPP
AGGSGIRRGGEGVLPPQPPTHQHQERPGGAATGSTRGQSTGKGPPPSPVFEGVYNNSRML
HFLTAVVGSTCDVKVKNGTTYEGIFKTLSSKFELAVDAVHRKASEPAGGPRREDIVDTMV
FKPSDVMMVHFRNVDFNYATKDKFTDSAIAMNSKVNGEHKEKVLQRWEGGDGNSDDYDLE
SDMSNGWDPNEMFKFNEENYGVKTTYDSSLSSYTVPLEKDNSEEFRQRELRAAQLAREIE
SSPQYRLRIAMENDDGRTEEEKHSSVQRQGSGRDSPSLVSREGKYIPLPQRMREGGPRGG
VRCSSSRGGRPGIGSLPPRGGPHHPDSSGPSPGPEPRGINGGPSRMSPKAQRPLRGAKTM
SSPSSRPPGETSVPPPTVGRMYPPRSPKSAAPAPASASCPEPPVGSAVPTSTASIPTVSS
SIEPGAGPISPTSPKVTAPNDGKELPQKEPGRTLEPPELARIAGKAPGLQNEQKRYQLEE
LKKFGAQFKLQSSSSPETNLDPFSPRGPKEGGVEAKGKEKEVEGLLAPEPLVSSGSSKTE
SPPDKEEKLSLPSTGGAEGPEQSQTPRQNQMGSPPGGISKGDDKEEGPVTDQVKKSTLNP
NAKEFNPSKPLLSVNKSTSTPTSPGPRTHSTPSIPVLTAGQSGMYSPQYISYIPQIHMGP
AVQAPQMYPYPVSNSVPGQQGKYRGAKGSLPPQRSDQHQPASAPPIMQAAAAAGPPLVAA
TPYSSYISYNPQQFPGQPTMMQPMAHYPSQPVFAPMLQSNPRMLTSGSHPQAIVSSSTPQ
YPPAEQPTPQALYATVHQSYPHHATQLHAHQPQPATTPTGSQPQSQHAAPSPVQHQAGQP
PHLGSGQPQQNLYHPGALTGTPPSLPPGPSAQSPQSSFPQPAAVYAIHAHQQLPHGFTNM
AHVTQAHVQTGITAAPPPHPGAPHPPQVMLLHPPQSHGGPPQGGVPQSGVPALSASTPSP
YTYIGHHQALLGFDSKGTSCLTQDKLIT
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgttgaagccgcagccgcctcagccatctcagccccagcagacacccatccagcaaccg
gcaccagcgcgccggcctcccggggggaccagcccccccaacggaagcctcggggggacc
ccagcctccgcctcggccccagggccgcccactgccgcttccccaggcctagggcctcct
gccggaggcagtggaatccgccggggaggtgagggggttctgccgccacaaccgccaaca
catcagcatcaggagcggcccgggggcgctgctactggcagtaccaggggacagagcaca
ggaaaggggcccccaccgtcacctgtatttgagggtgtctacaataattctaggatgcta
cacttccttactgctgttgtgggctctacttgtgatgtaaaggtgaaaaatggtaccaca
tatgaaggtattttcaagactctgagttcaaagtttgaactagcagtggatgcagttcat
aggaaggcttctgagccagctggtggtccccgtcgagaggatattgtggataccatggtg
tttaagccaagcgatgtgatgatggttcacttccgaaacgttgacttcaattatgccact
aaggacaagttcacagactctgccattgccatgaactcaaaagtgaatggtgaacataag
gagaaggtgctacagcgttgggaagggggtgatggcaacagtgatgactatgaccttgaa
tctgatatgtctaatggatgggaccccaatgaaatgttcaagttcaatgaagaaaactat
ggagtaaaaacaacttacgacagtagcctctcttcttatacggtccctctggagaaggac
aactcagaggagtttcgtcagcgggagcttcgtgcagcccaattggcccgagaaatagag
tccagtcctcagtaccgcttacgtattgctatggagaatgatgatggacggacagaggag
gagaagcatagctctgtgcaacgacagggctcaggtcgtgatagtcccagtttagtttcc
agggaagggaagtatatccctctgccccagagaatgcgggagggaggcccccgaggagga
gttcgatgcagcagctccaggggaggtcgacctggcattggttccttgccccctcggggt
ggcccccaccatcctgacagcagtggtcccagtcctggtcctgagccccgtggcatcaat
ggaggtccttcccgcatgtccccaaaagcccagaggccccttagaggtgcaaagactatg
tcttcccctagcagccggccccctggagaaacttctgtcccacctcctacagttggtcgg
atgtacccccctcgctctcctaagtcagctgctcctgccccagcctcagcttcctgtcct
gagccacctgtaggctctgcagtccccacctctacagcttccattcctacagtttcgtca
tctatagaacctggagctggtcccatttccccaacttccccaaaggttacagctcctaat
gatggaaaagaactaccccagaaggaacctggaagaactctggagccaccagagctagcc
cgaatagctgggaaagcccctggccttcagaatgaacaaaaacgttatcagttggaagaa
ctgaagaagtttggggctcagtttaagctccagtccagcagttctcctgagaccaacctg
gaccctttctccccccggggacccaaggagggtggggtggaagccaaaggaaaggaaaag
gaagtggagggtcttttggcaccagagcccctggtgtcctctggctcttccaaaacagaa
tctccacctgataaggaggaaaagctgtccctcccctcaacaggaggggctgagggacca
gagcaatcccaaacacctcgacagaaccaaatgggcagtcctcctgggggcatcagcaag
ggggatgacaaggaagagggacctgtcactgatcaagtgaagaagtcaacactgaacccc
aatgccaaggagttcaacccttcaaagcctctgttgtctgtgaacaagtcaaccagcacc
ccaacttccccaggtccccggactcattcaactccttcaatcccagtgctgacagcaggc
cagagtgggatgtatagtccccaatacatctcctatatacctcagatccacatggggcca
gccgtgcaggctcctcagatgtacccgtaccctgtatctaattctgtgcctggtcagcag
ggcaagtaccggggagctaaaggttccttgcccccacaacgctcagatcagcaccaacca
gcctcagcaccccctattatgcaggcggcagcagctgcagggcccccgttggtggcagct
acaccatactcttcctatatctcctacaatcctcagcaattcccaggccagcctaccatg
atgcagcccatggcccattatccctcacagcctgtctttgccccaatgcttcagagtaat
ccaaggatgctgacgtcaggcagtcacccccaggccatcgtttcatcttctactcctcag
taccctccagcagagcagcccactccccaagccctttatgccaccgttcaccagtcctat
ccacaccatgccacgcagctccatgcccaccagccgcagccagccaccacccctactggg
agccagccgcagtcccagcatgcggcccccagccctgtccagcatcaggcagggcagcca
ccacacttgggtagtgggcagccgcaacagaacttgtaccatccaggtgccttaacaggc
acaccaccatctctgccaccgggaccctctgcccagtcccctcagagcagcttccctcag
ccagctgcagtctatgccatccatgcccaccagcagctaccccacggcttcaccaatatg
gcccatgtcacccaggcccatgtccagactggaatcacagcagccccaccacctcatcct
ggggctccccacccaccccaggtgatgctgctgcacccaccccagagccatgggggtcca
cctcaggggggtgtgccccagagtggtgtgcctgctctttctgcttccacaccttcaccc
tacacctacatcggacaccaccaagccctgcttggtttcgactccaagggaacatcatgc
ctcactcaggataagctgatcacctga
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