Trichosurus vulpecula (common brushtail): 118830896
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Entry
118830896 CDS
T10126
Symbol
SCN11A
Name
(RefSeq) sodium channel protein type 11 subunit alpha
KO
K04843
voltage-gated sodium channel type XI alpha
Organism
tvp Trichosurus vulpecula (common brushtail)
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tvp04040
]
118830896 (SCN11A)
Ion channels [BR:
tvp04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
118830896 (SCN11A)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
PKD_channel
IQ_SCN5A_C
GPHH
Motif
Other DBs
NCBI-GeneID:
118830896
NCBI-ProteinID:
XP_036593864
LinkDB
All DBs
Position
9:complement(192013733..192127640)
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AA seq
1802 aa
AA seq
DB search
MIEKLIAAEKLKKKTQDPSAFEVSPRPQLDLKVSRKLPKIYGDIPPEVVGKPLEDLDPFY
VNHKTFMVLNKKRTIHRFSAKPALFILGPFNPIRRLAIRISVHSLFSMFIICTVVVNCVF
MAAAKEMDENKYAEHVFTAIYIFEALIKILARGLFLDEFTYLRDPWNWLDFVVILLAFLS
YMIKTLDSVSALRTFRVLRALKAISVISGLKVIVGALLRSVKKLVDVMILTIFCLSIFAL
VAQQFFMGSLRYRCINKSCLSNEPLPNGTCTFLKDDAEFLENCTENKTEGSSEKRLCGLW
MGNRSCCPEYVCCKTKISPDSNFTNFDHFGWAFLSMFRVMTQDSWERLYQQTLRAAGPLA
VVFFVVVIFLGSFYLINLTLAVVTMSYEEQNKNVAAETEAKEKMFREAVELLKQEQETLV
AMGIDRSSLNSLETSSISCQKRSLFSNKRRKSFLVGNSGQDQAPVSDPDEGIQTKQLLNQ
TKRLSQNLSVDYWDDHGDIFQRQRALSAVSIVTITMQEYEKSQKKCLPCQNNFVSKYCIW
ECCPLWLRIKRIVELIIMDPFADLVITICIIVNTVFMAMEHYKKEQAFDHMLNVGNYVFT
GIFVAEMFFKIIALDPYYYFLRPWNIFDSIIVVLSLVEIIITNVANSNLSLLRSLRLLRV
FKLAKSWPTLNTLIKIIGHSVGALGNLTLVLAIIVFIFSVVGMQLFGTSFNKTRSLNSVK
TSDRRWHMGDFFHSFLVVFRILCGEWIDNMWECMRESHHVLCILVFLLILVIGNLVVLNL
FIALLLNSFSREEREGNGAGEVRKTKLQLAFDRFRWAFHFVKQAIWQFCSSPFRKQRLRK
PKDVSKKHKAQNKDIIPLESGINLEQANQEKLCSQDETSPPEFTGLGCVQENLNTRHPSF
IKAPLAEEEEEDEDIGSLDEDEPQDFMETEFCKQEEKDRMSPGARSGELDVFSEEDTEWV
AQKLKEKFDAISYVSNCSTIDLKDLNVLIPELILEKRPERCLPKVCIKCFPCFALNVRKS
PGILWLNLRVTCYRIVKHDWFESFIIFMILLSSGALVFEDCYLPTKPAIKELLNFTDKVF
TYIFILEMFLKWVAYGFRKYFTNAWCFLDFVIVNVSIVSLIANNSKSSLSFKSLRTLRAL
RPLRALSQFEGMRVVVNALVGAIPAILNVLFVCLIFWLIFCMLGVNLFSGRFGKCITQVE
KEAINYTIVNNRTLCEMGIHPNACWSNAKVNFDNVGIGYLALLQVATFKGWMDIMDAAVD
SRGVKEQPDFEANMYAYLFFVVFIIFGSFFTLNLFIGVIIDNFNQQQKKISGQDIFMTEE
QKKYYNAMKKLGSKKPQKPIPRPLNKCQAFVFDVVTSQAFDIFIITLICLNMITMMAETD
PPEGPNEQKKFLLEALNYVFVVIFTVECLLKIFALRQFYFANGWNLFDCVVVVLSVVSLL
VSILESSKSIPFPPVLFRVIRLARIGRILRLVRAAKGIRTLLFALMMSLPSLFNIGLLLF
LVMFIYAIIGMTNFSHVKYEAGIDDMFNFRTFGSSMLCLFQITTSAGWDALLSPMLSPRH
STCNPENSCNSESSSCNSESSSCPRNDIKPGSDCVNSVMAITFFVSYIIISFLIVVNMYI
AVILENFNTATEESEDPLSEDDFDIFYETWEKFDPEATQFIEYSALSDFADALPDPLRVA
KPNRNQLLVMDLPMVSGNRLHCMDILFAFTTRVLGDSEGMDCLKSQMEEKFMEANPNKKL
YEPIVTTTKRMEEERCAAIIQKAYRLYLRKSNAKKTTSLPHQTVCNGAIGNLEVPDGKVH
FD
NT seq
5409 nt
NT seq
+upstream
nt +downstream
nt
atgattgagaaactgattgctgcagagaaactgaagaagaaaacccaagacccgtcagct
tttgaagtctctcctcggcctcagctcgacttgaaagtatccaggaagttgcccaagatt
tatggggacattcctcctgaggttgtggggaagcctttggaagaccttgaccctttctat
gtgaaccacaagacattcatggtgttgaacaaaaagaggacaatccaccgcttcagtgcc
aagccagccttattcattcttgggccttttaacccaatcaggaggttggccattcgcatc
tcagtccattcattattcagcatgttcatcatatgcactgttgttgtcaattgtgtcttc
atggctgcagcaaaagaaatggatgaaaataaatatgctgagcatgtttttactgcaatc
tacatttttgaagcattgattaaaatattagcaagaggactttttctggatgaattcact
taccttcgagatccatggaactggttggattttgttgtcatcctgctggcatttctatcg
tatatgataaaaacattagacagtgtgtcagctctaagaacgtttcgagtcctcagagct
ttaaaagccatctcagtcatttcaggtttgaaggtcattgttggggccctactgcgctca
gtcaagaaactggtggatgtgatgattctgaccatcttttgtttgagcatttttgccttg
gtggctcagcagttcttcatgggaagtctgaggtatagatgtatcaacaagtcctgtttg
agtaatgagcctttaccaaatggaacctgtacatttctcaaggacgatgctgaatttcta
gaaaactgcactgaaaataaaactgaaggctcatctgaaaaaaggttatgtggcctctgg
atgggtaatagatcatgttgccctgagtatgtttgctgtaaaactaagatcagtcctgat
tctaattttacgaactttgaccattttggttgggcctttctcagcatgttccgtgtgatg
actcaggattcctgggaacgcctttatcagcagaccctccgagctgctgggccacttgct
gtagtgttttttgtggtcgtcatcttcctgggctctttttacctgatcaacctgaccttg
gctgtcgtcaccatgtcgtatgaggagcagaacaaaaatgtggcagctgagacagaagcc
aaagagaaaatgttcagagaggctgtggagctgctgaagcaggaacaggagactctagtt
gctatgggaattgataggagttcactcaattcccttgaaacatcatccatttcttgtcaa
aagagaagcctgtttagcaacaagagaaggaaatccttccttgtgggaaattctgggcaa
gatcaagctccagtctctgatcctgatgaaggtatccaaacaaagcagctactgaaccaa
accaagcgcctatcccagaacctatcggtggattattgggatgaccacggcgatatcttt
cagaggcaacgcgccctgagcgccgtcagcatcgtcaccatcaccatgcaagagtatgaa
aagtcacagaagaaatgccttccctgtcagaataactttgtctccaaatactgcatttgg
gagtgttgtcccctgtggctgcgcattaaaaggattgtggagctaattatcatggatccc
tttgctgacctggttatcaccatttgcatcattgtcaacactgtattcatggcaatggag
cactataaaaaggagcaagcctttgatcatatgctcaacgtaggaaattatgtttttact
ggaatttttgtcgcagaaatgttcttcaaaatcatcgccctggatccatactattatttt
ctccgtccctggaacatttttgatagcatcattgttgttctgagtctggtagaaataatc
attacaaatgttgcgaactcaaatttgtcactattacgttccttaagactgctgagagtt
ttcaagctagccaaatcctggccaacattgaatactcttattaagattattggccactcg
gttggtgctctgggtaacctcactctggtcctggccatcattgttttcatcttctcagtc
gttggcatgcagctttttgggacttccttcaataaaactcgtagtcttaactccgtgaaa
acttcggaccggcgttggcatatgggagacttcttccactctttcctagttgtattccgc
attctctgtggtgaatggattgacaacatgtgggagtgtatgcgtgagtctcaccatgtg
ctgtgcattctggtcttcttgctgatcttagtgataggaaacttggtggtactcaatctt
ttcatcgccctgctgctcaactccttcagcagagaggaaagagaagggaatggggctgga
gaggtgaggaagaccaagctgcagcttgctttcgatcggttccgctgggcgtttcatttt
gtgaaacaagccatttggcaattttgtagcagtcctttcaggaagcaaaggcttagaaag
ccaaaagatgtgtccaaaaagcataaggctcagaataaagacattattccactggagtca
ggaataaacctagagcaagcaaaccaggaaaaactttgctctcaggacgagaccagtccc
cctgagttcacaggcctgggctgtgtgcaggagaatttgaataccaggcatccttcattt
attaaagccccacttgctgaagaagaagaagaagatgaagatattggatctctggatgaa
gatgagccccaggatttcatggaaacagaattttgtaaacaggaggaaaaagaccgtatg
agcccgggagccaggagtggagagcttgatgtattttctgaagaagacactgaatgggta
gcacagaaattgaaagagaagtttgacgcaatcagctatgtatctaattgcagcaccatt
gatctgaaggatctcaatgtgttgattcctgaactgattcttgaaaagaggcccgagaga
tgtttgcccaaagtctgcatcaaatgcttcccctgctttgcactgaatgtaagaaagtct
cctggaatcctttggctgaacctgagggtaacctgctacagaattgtcaagcacgactgg
tttgagagcttcattatcttcatgattctcctgagcagtggagctctggtatttgaagat
tgctaccttccaacaaaacccgccattaaggaattgctgaattttactgataaggttttt
acctacattttcatcctggagatgtttttaaagtgggtagcatatggatttaggaagtat
ttcacgaatgcatggtgctttctcgacttcgtcattgtaaatgtctctatcgtaagcctt
attgctaataattcaaaatcatccttgtcttttaaatcccttcggacactgagagccctg
aggcccttgcgagcactgtcccagtttgagggaatgagggttgttgtcaatgcccttgtt
ggggccatcccagccatcttaaatgttctgttcgtctgcctcattttttggctcatcttc
tgtatgttaggggtgaacctcttttctgggagatttggaaagtgcatcactcaagttgaa
aaagaagctataaactacaccatcgttaacaacaggacattgtgcgaaatggggatccac
cctaatgcatgctggagtaatgctaaagtcaactttgataatgttggaattggttacttg
gctcttctacaggtggcgacgtttaaaggttggatggatattatggatgcagctgtagat
tcaagaggggtaaaggagcagcctgacttcgaggcaaatatgtatgcctatctcttcttt
gttgtttttatcatttttggctcattcttcacacttaatcttttcatcggtgtaatcatt
gacaactttaaccaacagcagaaaaagataagtggccaagatatcttcatgacagaggaa
cagaaaaaatattacaatgcgatgaaaaaactgggatcaaagaagccccaaaaacctatt
ccaaggcctttgaacaaatgccaagcttttgtgtttgatgtagtcaccagccaggccttt
gatattttcatcataactctcatttgccttaatatgatcaccatgatggcagaaacagac
cctcctgaaggacccaacgaacaaaagaaattccttctagaagccctcaactatgtcttt
gttgtcatcttcacagttgaatgtctcctgaaaatctttgctctgaggcaattctatttt
gctaatggttggaacttatttgattgtgtggtcgtagtgctctccgttgttagccttttg
gtttctatactggaatcaagtaagtcaattccattccctcctgtgctcttcagagtcatc
cgcttggctcggatcggccgaatactcaggcttgttcgagcagctaaaggaatcaggacc
cttcttttcgcactaatgatgtcacttccttcactattcaacattggacttctgctcttt
ctggtcatgtttatctatgccattattggcatgactaatttttcccacgtgaaatatgag
gcagggattgacgacatgttcaactttcgaaccttcggcagcagcatgctgtgtctcttc
caaatcactacatcggcgggctgggacgccctcttaagtcctatgttgagtccaagacat
tcaacttgtaacccagagaattcttgtaattctgaaagttcatcttgcaactcagaaagt
tcatcttgtcccagaaatgacatcaaaccaggtagtgattgtgtcaactctgtcatggca
attacattctttgtcagttacatcattatctccttcctaattgttgtaaacatgtacatt
gctgtgattttggaaaacttcaacacagccactgaagagagtgaggatcccttaagcgag
gatgactttgacatattctatgaaacttgggaaaaatttgatcccgaagcaacacaattc
attgaatactcagcactctcagactttgctgatgccttgccagatcccttacgtgtggcc
aagccaaacagaaatcagcttctagtgatggacctgcccatggtcagtggcaatagactc
cactgcatggatatactgtttgcttttaccacaagagtgctgggggactcagaaggcatg
gattgcctcaaaagccagatggaagagaaattcatggaggccaatcctaacaagaaatta
tatgaaccgattgtgaccaccacaaagcgcatggaagaagagaggtgtgctgctatcatc
cagaaggcctatcgactgtacttgcggaagagtaatgccaagaaaacaacttccttacca
catcagacggtttgcaatggagccattggtaacttagaagtacctgatggcaaagtacac
tttgactga
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integrated database retrieval system
