Trichosurus vulpecula (common brushtail): 118830913
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Entry
118830913 CDS
T10126
Symbol
DHX30
Name
(RefSeq) ATP-dependent RNA helicase DHX30 isoform X1
KO
K13185
ATP-dependent RNA helicase DHX30 [EC:
5.6.2.6
]
Organism
tvp Trichosurus vulpecula (common brushtail)
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tvp03041
]
118830913 (DHX30)
03029 Mitochondrial biogenesis [BR:
tvp03029
]
118830913 (DHX30)
Enzymes [BR:
tvp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
118830913 (DHX30)
Spliceosome [BR:
tvp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
118830913 (DHX30)
Mitochondrial biogenesis [BR:
tvp03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
118830913 (DHX30)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DSRM_2
Helicase_C
DEAD
HA2_C
OB_NTP_bind
dsrm
Dicer_dimer
nSTAND3
AAA_22
AAA_16
AAA_19
HA2_N
AAA_23
Motif
Other DBs
NCBI-GeneID:
118830913
NCBI-ProteinID:
XP_036593888
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All DBs
Position
9:complement(111893989..111924658)
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AA seq
1192 aa
AA seq
DB search
MFSLDSFRKDRTQHRQRQCKLPPPRLPPMCVNPAPGGTISRASRDLLKEFPQPKNLLNSV
IGRALGISHAKDKLVYVHTNGPKKKKVTLHIKWPKSVEVEGYGSKKIDAERQAAAAACQL
FKGWGLLGPRNELFDAAKYRVLADRFGSPADSWWRPEPTMPPNSWRQLNPESIRPMGPSS
LSRSMGREEEDEEEEELEEGTIDVTDFLSMAQQESHTPLRDTRGGSFEMTDDDSAVRALT
QFPLPKNLLAKVIQIATSSSTAKNLMQFHTVGTKTKLSTLTLLWPCPMTFVAKGRRKAEA
ENKAAALACKKLKSLGLVDRNNEPLTHAMYNLASLRELGETQRRPCTIQVPEPILRKMEN
YLNHYPVENPWISPEPRLQNEDPLHLSKDTGPLSDPITGKPYIPLSEGEELRLSQGLLEL
WRRRGPSWQETHQLPVDPHRDTILSAIEQHPVVVISGDTGCGKTTRIPQLLLERYVTEGR
GARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGIL
LRKLQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFA
RYFGGCPVIKVPGFMYPVKEHYLEDILAKLGKHQHRHRHHESEDECALDLDLMTDLVLHI
DARGDPGGILCFLPGWQEIKGVQQRLQEALGSYESKYLILPVHSNIPMMDQKAIFQQPPT
GVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGR
AGRCQSGFAYHLFPRSRLEKMAPFQVPEILRTPLENLVLQAKIHMPEKTAVEFLSKAVDS
PDIKAVDEAVILLQEIGVLDQREFLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVV
VSCLTRDPFSSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAGWEEVLRWQDRSSRENYL
EENLLYAPSLRFIHGLIKQFSENIYEAFLVGKPSDCTLPSAQCNQYSEEEELVKGVLMAG
LYPNLIQVRQGKVTRQGKFKPNSVTYRTKAGNILLHKSTINREATRLRSRWLTYFMAVKS
NGSVFVRDSSQVHPLAVLLLTDGDVHIRDDGRRATISLSDSDLLRLEGDSHTVRLLRELR
RALGRMVERSLRCELPALPPDVQQEHSQLLALLVELLRGPCGSFDVRKTADD
NT seq
3579 nt
NT seq
+upstream
nt +downstream
nt
atgtttagcctggactcatttaggaaagatcggacccagcacaggcagcgtcagtgcaag
ctccccccaccccgccttcctccgatgtgtgtcaacccagcccctggagggaccatctct
cgggcttctagggatttgttgaaagaattcccacagcccaaaaatcttctcaacagtgtg
atcggaagagcccttggcatctctcacgcaaaagacaaactggtctacgtccacacaaat
gggccaaagaaaaagaaagtcacactgcacataaagtggccgaagagcgttgaggtggaa
ggttatgggagtaagaagattgatgccgagaggcaggctgcagccgctgcatgccagctt
tttaagggctggggccttctgggaccccgaaatgaactctttgatgcagctaaataccga
gtgctggctgacagatttggctctccggctgacagctggtggcggccagaacctactatg
ccacccaactcctggaggcagctgaaccctgagagcatccggccaatggggcccagcagt
ctatcccgctctatgggccgagaggaagaggatgaggaagaagaagagctagaggaaggg
acaattgatgttaccgacttcctgtctatggcccaacaggagtctcacactccactcagg
gacacaagagggggctcctttgagatgacagacgacgacagtgctgtccgagcacttacc
cagttcccgcttcccaagaaccttctggccaaggtgatccagattgcaacctcgtcctcc
accgccaagaacctcatgcaattccacactgtgggtaccaagacaaagctctccactctt
accctgctctggccatgtcccatgacctttgttgccaaggggcgccgcaaagcagaggcg
gaaaataaagcagctgccttggcttgcaagaagttgaagagcctgggcctagtggatagg
aacaatgaaccactgactcacgccatgtacaacctggcctctctgcgagagctaggcgaa
acacagcgtcgaccctgcaccatccaggtgccagagcctatcctgcgaaagatggagaac
tacctgaaccattaccccgtggaaaatccttggatctccccggagcctaggctgcagaat
gaggatcccttgcacttaagcaaggacacagggcccctgagtgaccctatcacagggaag
ccttacattcctctgtcggagggagaggagctacggctaagccaggggctgttggagttg
tggcggcggcgtgggccttcctggcaggagactcaccaactacctgtggatccacaccgg
gacaccatcctgtcagcgatcgaacagcaccctgtggttgtgatctcaggggacacgggc
tgtggcaagacaacacggataccacagctgctgctggaacgttacgtgacagagggccga
ggggcccggtgcaatgtgatcatcactcaaccccgccgtatctcagctgtgtctgtggcc
caacgtgttagtcatgaactgggaccctctctgcggcggaatgtgggattccaggtgcgg
ctggagagtaagcccccggcccgaggtggagccctgctcttctgcactgtgggcatcctc
cttcggaagttgcagagcaaccccagtctcgagggtgtgagccatgtcatcgtagatgag
gtacacgaacgagacgtcaacacggactttctgctcatcctgctgaaggggctgcagcgg
ttgaacccagctctgcggcttgtgttaatgagtgccacgggtgacaatgagcgctttgct
cgatactttggtggctgcccagtcatcaaggtgcctggcttcatgtacccagtgaaggag
cactacctggaggacatcttggccaagttgggcaagcaccagcaccggcaccggcatcac
gagtctgaggatgagtgcgctctggatttggacctcatgactgatctggttttgcatatt
gatgcccggggagacccaggtgggattctgtgtttcctgcctggctggcaggagatcaaa
ggagtacagcaacgcctgcaggaggccttgggctcctatgaaagcaagtacctgatcttg
ccagtgcactccaacatccccatgatggaccagaaggcaattttccagcagcccccgaca
ggggtgcgcaagattgtcttggccaccaacattgctgaaacttccatcacggtcaacgac
atagtacatgtggtggacagtggcctgcacaaggaggagcgctatgaccttaagaccaag
gtgtcctgcctagaaacagtgtgggtgtcaagggcaaatgtgatccagcgccgaggaagg
gctgggcggtgccaatcaggcttcgcctaccacctgtttcctcggagtaggctggagaag
atggcaccttttcaggttcccgaaattctgcgcaccccactggagaacctggtgttgcaa
gcgaagatccatatgcctgagaagacggcagtcgaattcctctccaaggctgtggatagc
cctgacatcaaggccgtagatgaggctgtgatcctgctgcaggagatcggtgtgctggac
cagcgggaattcctgactacgctgggtcagcgccttgctcatatctccacggacccgagg
cttgccaaggccattgtcctggcagccatcttccgctgcctacatcctctgctagttgtt
gtctcctgcctcacccgagaccccttcagcagtagcttgcagaaccgtgctgaggtggac
aaggtgaaggcactattgagccatgatagtgggagtgaccacctggcatttgtccgggct
gtggctggctgggaggaggtgcttcgttggcaggatcgtagttctcgagagaactatctg
gaggagaacctactttatgctcccagcctgcgttttatccatggcctcatcaagcagttc
tcagagaacatttatgaggccttcctggtgggaaaaccatcagactgcaccctgccctca
gcccagtgcaaccagtacagtgaagaggaggagctggtgaaaggggtgcttatggctgga
ctttaccccaacctcattcaggtgaggcagggcaaggtgacccggcagggaaagttcaag
cccaatagtgtcacctaccggaccaaagccggcaatatcctgctgcataagtcaaccatt
aacagggaggctactcggctacgtagccgttggctgacatatttcatggctgttaagtcc
aatggcagtgtctttgtgcgagactcgtcccaggtccaccccctggctgtgctgctgctg
accgatggagacgtccatatcagagatgatgggcgccgtgccaccatctccctgagtgac
agtgatctcctacggctagagggtgactcgcacactgttcggctgctacgggagcttcgc
cgggccctaggccgaatggtggagcggagcctccgctgtgagttgcccgccctgccgcca
gatgtgcagcaggagcacagccagttgctggccttgctcgtggagctgctgcgtgggcct
tgtggtagcttcgatgttcgtaaaaccgctgatgactga
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integrated database retrieval system
