Trichosurus vulpecula (common brushtail): 118830917
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Entry
118830917 CDS
T10126
Symbol
SLX1A
Name
(RefSeq) structure-specific endonuclease subunit SLX1 isoform X1
KO
K15078
structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
Organism
tvp Trichosurus vulpecula (common brushtail)
Pathway
tvp03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
118830917 (SLX1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tvp03400
]
118830917 (SLX1A)
DNA repair and recombination proteins [BR:
tvp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
118830917 (SLX1A)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLX1_C
GIY-YIG
C1_2
zf-HC5HC2H
Motif
Other DBs
NCBI-GeneID:
118830917
NCBI-ProteinID:
XP_036593896
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All DBs
Position
9:78103974..78107807
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AA seq
305 aa
AA seq
DB search
MSRSWLGEGLPPPMSSALRFRQCVDPQELSPPPGTMGPAEDSRAAKKPQPFFGVYLLYCL
NPKYRGRVYVGFTVNPSRRVQQHNAGRKKGGAWRTSGRGPWEMVLIVHGFPSDVAALRFE
WAWQHPGASRRLAHVSGKARKEGAFFFHLRVLAQMLQVAPWNRLPLTVRWLQHDFQQELS
PPPPQHMPLAFGPLQPGLTQGGRRGVGKEADDVFCSLCQQPVQDKDGPLCCPHPNCPLNA
HLICLAEEFLQEEPQQLLPLKGCCPGCKNTLLWGDLIRLHQAYPSNLEEVESDLEETHWT
DEMKT
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgatcgtggcttggtgagggtctccctcccccaatgtcctctgccctgcgcttt
aggcaatgtgtcgacccccaggaactaagccccccgccgggaacgatggggcccgcggaa
gactctcgggcggcgaagaagccgcagccatttttcggggtctaccttctctactgtctc
aaccccaaatacagaggccgcgtctacgtgggcttcacggtgaacccctctcggcgagtc
cagcagcacaacgccgggcgcaagaagggaggggcgtggaggactagcgggcgaggacct
tgggaaatggtcctcatcgtccacggctttccctctgatgtggctgcccttaggtttgag
tgggcctggcagcaccctggggcctcccgtcgcctggctcacgtaagtggcaaagccagg
aaagagggggccttttttttccaccttcgggtactggcccagatgctacaggtggcccct
tggaatcggttgcccctcaccgtgcgctggctacaacatgacttccagcaggaactcagc
cctccacctccccagcatatgcctcttgcttttgggcctttgcaaccaggcctcactcaa
ggaggaaggagaggggtaggcaaggaagcagatgacgtcttctgctctctctgccaacag
ccagtccaggataaggatggacccctttgctgtcctcaccccaactgtccattgaatgct
cacctaatttgccttgctgaagaattccttcaagaggaacctcaacagcttctgcccctg
aagggctgctgcccaggctgtaagaacactttgttgtggggagacttgatccgtctacac
caggcatatcctagcaatctggaagaggtagaatctgaccttgaagagacacactggacg
gacgaaatgaagacttag
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integrated database retrieval system
