Trichosurus vulpecula (common brushtail): 118830965
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Entry
118830965 CDS
T10126
Symbol
XPC
Name
(RefSeq) DNA repair protein complementing XP-C cells
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
tvp Trichosurus vulpecula (common brushtail)
Pathway
tvp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
118830965 (XPC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tvp03400
]
118830965 (XPC)
DNA repair and recombination proteins [BR:
tvp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
118830965 (XPC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Motif
Other DBs
NCBI-GeneID:
118830965
NCBI-ProteinID:
XP_036593991
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Position
9:complement(147973499..147999525)
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AA seq
929 aa
AA seq
DB search
MARKRASCVAQLGQRPPKKARTQQAEPDVFEDQKPKKTRVPRAPSGRRKKRSSDSGGLRG
GASKKAGVKAQKKSEKRPSVKEEASSEGEDFTNFTSAAKKEIQPKTEASVKRDGSRENDE
DESEDDWEEVEELNEPAPDEMGGTPGPFQSALSTKPVEIEIETPEQVKARERREKRQTEL
ETYLRRMMKRFNKEIREETHKVHLLCLLANGFFRNNICNEPDLQAIGLSIVPAHFTKVLP
NKVDVPYLSNLVKWFIATFTVNAELSIDERDSLRSTLGRRFAIYSARDNEELVHIFLLIL
RSLQLLTRLVLSLQPIPLKLLAAKGKKKSQCSSPENPGSSSQPPSQKAQTQIRSKTSTGE
AAASSKRAAESKKPELQKAAAGRKKQPSPREEEDTAIERERAQRPVRERRRTSKVSYKEE
SGSDGAESSSDFELSSENDSHLSDEDSQPGTRRPRRSAPAQRTKAASAGSRRRVSTSAKN
KRVSGRPSILPAASLEASGTKRGKIISSDEEEEIGKAVGVDEWLEVFCEGEDRWVCVDCV
HGVVGQPLTCYKYATKPLSYIIGIDNDGCARDITQRYDPAWMTATRKCRVDSQWWAETLR
PYQSPFGARENKEEMEFQAKLQSQPLPTAIGMYKNHPLYALKRHLLKYEAIYPETAAILG
YCRGEAVYSRDCVHTLHSRDTWLKEARVVRLGEVPYKMVKGYSNRARKARLADPQFRDQD
DLGLFGRWQTEEYQPPVAVDGKVPRNEFGNVYLFMPSMLPIGCVQLKLPNLHRVARKLGI
DCVQAITGFDFHAGYSHPVTDGYIVCEEYKDVLLAAWDNEQSLIEQKEKEKREKRVLGHW
KLLVKGLLIRERLKQRFGNKGEAATATPEGGAGFSSDEEGTSSQAAAKTLAASWPQNRET
EEQQKRKGTRKTKREKREEAKHLFPFEKL
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atggcccgaaagcgagcgtcctgcgtggcgcagctgggccagcggccccccaagaaggcc
cggacccagcaagcggagcccgatgtctttgaagatcagaagccaaagaagactcgtgtc
cccagagccccgagtgggaggaggaagaagaggagcagcgactctggggggctccgaggt
ggtgcctcaaagaaggcgggagtcaaggcacagaagaaatctgaaaagcgtcccagcgtg
aaggaggaagcctctagtgagggagaagatttcactaacttcacaagtgctgccaagaag
gagatccagccaaagacagaagcctccgtgaaaagagacggcagtagagaaaatgatgaa
gatgaaagcgaggatgattgggaggaggtcgaagaacttaatgagcctgcaccagatgaa
atgggaggaaccccgggcccctttcaatcagctctgtccaccaagccggtggagatagag
atcgaaacgccggagcaggtgaaggcaagagagagaagagaaaaaaggcagacggaattg
gaaacataccttcggagaatgatgaagcgcttcaataaggaaatccgtgaagagacgcac
aaggtacacctgctttgtctgctagcaaatggtttctttcggaataacatctgtaatgag
ccagatctccaggccatcggcctctccatcgtaccagctcacttcaccaaagtgcttcct
aataaagtggatgtcccttacctttcaaacctggtaaaatggttcatcgccacattcact
gtcaatgcagagctttccatagatgagcgagacagcctgcgctccaccttaggaaggcgt
tttgctatttattcagcacgagataatgaagaattagtccatatatttttgttgattctc
cgatcactgcagcttctcacccggctggtgttgtctctgcagcccattcctctgaagttg
ctagctgcaaagggcaagaaaaagtctcagtgcagctccccagagaatcctggaagttct
tctcagccccccagccaaaaggcccaaacccagatcagatcaaagactagcacaggagaa
gcggcagcctcttccaagagggcagcagagagcaaaaaaccagagctgcagaaggcagca
gcaggcaggaaaaaacagccttctcccagggaggaggaagacacggcgatagagagggag
agagcccagagacccgtaagggaaagacggaggacatcaaaggtgtcctacaaagaggag
agtgggagcgatggggccgagagcagctccgatttcgagctctccagtgagaatgacagt
cacttatccgatgaagattctcagcctggcacccggagaccaaggaggtcagcgccagcc
cagaggacaaaggcagcatctgcaggcagtagaaggagagtcagtacatcagcaaagaat
aaaagagttagtggtcggccttccatccttccagcagcatccctagaggcttcaggcacc
aagaggggcaagatcatttctagcgatgaagaagaagaaatcgggaaagcagttggtgtg
gacgagtggctagaagtgttctgtgagggggaggataggtgggtatgtgtagattgtgtc
catggcgtggtgggccagcccttgacctgttataaatatgccaccaagcccttgtcctac
atcattggcattgacaatgatgggtgtgcccgggatatcacacagcggtatgacccggcc
tggatgacagctacccgcaagtgccgtgtagattcacagtggtgggctgagaccttgaga
ccctaccaaagcccttttggggcaagggaaaataaagaagaaatggagttccaggcaaag
ctccagagccagcccttgccaactgctatcggcatgtataagaaccaccctctttatgcc
ttgaagaggcatctcctgaaatatgaggccatatacccagagactgccgctatccttggg
tactgtcgtggggaagctgtgtattctagggactgtgtccacactctgcattcgcgggat
acctggttgaaggaagcacgagtagtcaggcttggggaagttccatacaagatggtgaaa
ggatattccaatcgtgcccggaaggcccggctggctgacccccagttccgggaccaagat
gacctgggtctgtttggccgctggcagacagaggagtaccagccacctgtggcagtggat
gggaaggtcccccggaatgaatttggaaatgtttacctcttcatgcccagcatgctgcct
attggctgtgtccagctgaaactgcccaatctgcatcgagttgcccgaaagctgggtatc
gactgtgtccaggctatcactggctttgacttccatgctggctactcacatcctgtaacc
gatgggtacatcgtgtgtgaagagtacaaagacgtgcttttggctgcctgggacaatgaa
cagtcactcattgaacaaaaggagaaagagaaaagagagaagagagtcctaggccactgg
aaattactggtgaaagggctcctcataagagaaaggctgaagcaacgcttcggtaacaag
ggagaagctgccacagcaactccagagggaggagcaggattctcgtcggacgaggaaggg
accagctcacaggcagcagccaaaactttggctgcctcctggccccagaaccgagaaact
gaagagcagcagaaacgcaaaggaactaggaagaccaaaagggaaaagagagaggaagcc
aaacacctgttcccctttgaaaagttgtaa
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