Trichosurus vulpecula (common brushtail): 118831042
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Entry
118831042 CDS
T10126
Symbol
RAD23B
Name
(RefSeq) UV excision repair protein RAD23 homolog B isoform X1
KO
K10839
UV excision repair protein RAD23
Organism
tvp Trichosurus vulpecula (common brushtail)
Pathway
tvp03420
Nucleotide excision repair
tvp04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
118831042 (RAD23B)
09124 Replication and repair
03420 Nucleotide excision repair
118831042 (RAD23B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
tvp03051
]
118831042 (RAD23B)
03400 DNA repair and recombination proteins [BR:
tvp03400
]
118831042 (RAD23B)
Proteasome [BR:
tvp03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
118831042 (RAD23B)
DNA repair and recombination proteins [BR:
tvp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
118831042 (RAD23B)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
ubiquitin
XPC-binding
UBA_7
Rad60-SLD
Rad60-SLD_2
Crinkler
UBA_3
Dsc3_N
New_glue
UBA_2
DUF1421
UBA_9
Motif
Other DBs
NCBI-GeneID:
118831042
NCBI-ProteinID:
XP_036594110
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Position
9:103406919..103497785
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AA seq
426 aa
AA seq
DB search
MASGGGGDTMQITLKTLQQQTFKIDINPEETVKALKEKIESEKGKDAFPVAGQKLIYAGK
ILNDDTALKEYKIDEKNFVVVMVTKPKAAATSTPSPATTQQSNPATTTTVSSSTAASVAQ
APTPSPALAPTPTPTSVTPTPTAAACEPIPTSAPKEEKPAEKPVEAPIGISPTSSDSTLG
DSSRSNLFEDATSALVTGQSYENMVTEIMSMGYEREQVIAALRASFNNPDRAVEYLLMGI
PGDRESQAVVDPPQAASTGAAQSSAVAAAAATTTATTTTTTTSGGHPLEFLRNQPQFQQM
RQIIQQNPSLLPALLQQIGRENPQLLQSSNAPQQISQHQEHFIQMLNEPVQESGGQGGGG
GGSGGIAEAGSGHMNYIQVTPQEKEAIERLKALGFPEGLVIQAYFACEKNENLAANFLLQ
QNFDED
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccggaggtggcggcgacaccatgcagatcactctgaaaaccctccagcaacag
accttcaagatcgacatcaaccctgaggagacggttaaggcactgaaagagaagattgaa
tctgaaaagggaaaggatgcctttccagtagcaggccaaaaattaatttatgcaggcaaa
atcctcaacgatgatactgctctcaaagaatacaaaattgatgagaagaactttgtggtg
gttatggtgacaaaacccaaagcagcagctacttcaacaccatcaccagctacaactcaa
caatcaaatcctgctaccactactacagttagttcatctacagcagcatctgtggctcaa
gccccaactccttcccctgccttggctcctacccctacacctacatctgtcactccaaca
ccaactgcagcagcttgtgaacctatacctactagtgctcctaaggaagagaaaccagca
gagaagccggtggaagctcctattggtattagcccaacatcttctgacagtaccctgggt
gactcttctcggtcaaacctttttgaagatgcaacaagtgctcttgtgacgggccaatcc
tatgaaaatatggtgactgagatcatgtcaatgggctatgaacgagagcaagtaattgca
gcactgagagcgagtttcaacaaccctgatagagcagtggaatatcttttaatgggtatc
ccaggagatagagagagtcaggctgtggtggatcccccccaggctgccagcacaggggct
gctcagtcttcagcggtggcagcagctgcagccacgacaacagcaacaactactactact
actacttctggaggacatccacttgaatttttacggaaccagcctcagttccagcagatg
agacaaattattcaacagaatccttcccttctgccagccttgttacagcaaataggacga
gaaaatcctcagttattgcagtcctccaatgcaccgcagcaaatcagccaacatcaagag
cattttattcaaatgctaaatgaaccagttcaagaatctggtggtcaaggaggaggtggg
ggtggcagtggaggaatagctgaagctggaagtggtcacatgaactacattcaagtaaca
cctcaggaaaaagaagctatagaacggttaaaggcattaggattccctgaaggacttgtg
atacaggcttattttgcttgtgagaagaatgaaaatttggctgccaattttcttctacag
cagaactttgatgaagattga
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