Trichosurus vulpecula (common brushtail): 118831167
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Entry
118831167 CDS
T10126
Name
(RefSeq) LOW QUALITY PROTEIN: CCR4-NOT transcription complex subunit 3-like
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
tvp Trichosurus vulpecula (common brushtail)
Pathway
tvp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
118831167
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tvp03019
]
118831167
Messenger RNA biogenesis [BR:
tvp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
118831167
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
118831167
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NOT2_3_5_C
Not3
Motif
Other DBs
NCBI-GeneID:
118831167
NCBI-ProteinID:
XP_036594235
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All DBs
Position
9:14942788..14945398
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AA seq
632 aa
AA seq
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MAGMLVLCYKHCGLWVVGAQKVDPAQKEKEEVGQWLTNTIDTPNMQVDQFESEVESLSAQ
TRKKKGDKDKQDRIEGLKRHIEKHRYHMRMLETILRMLDDDSILVDSIRKIKDDVEYYVD
SSQDPDFEGNEFLYDDLDLEDIPQALVATSPPTHSHMEDEIFNQSSSTPTSTTSSSPIPP
SPANCTTENSEDDKKRGRSTDSEVSQSPAKNGSKPVHSNHHPHSPAVPSSYPAGPAPVPP
ALGNGPGSNGAPVAPPKANPAPGHNASTPTPYAQAVAPPAPSTGSAQPRPPSVQPGGSSS
KQNGATSYSSMVADNSSELSLSSSGSSSSSSQALGPPPGPHNPPPTTTKEAAGAAPAGAG
GVGGGSGSGAGGPSLLVPLSVNPPSSPTPSFSEPKAAGALLNGPPXFSTALEIKAPEPLS
SLKSMAERAAISSGIEDSVPALHLAERDMLLGSSSAPPASAQPPLQLSEVNIPLSLGVCP
LGPVALTKEQLYQQAMEEAAWHHMPHPSDSERIRQYLPRNPCPTPLYHHQMPPPRSDTVE
FYQRLPTETLFFIFYYLEGTKAQYLAAKALKKQSWQFHTKYMMWFQRHEEPKTITDEFEQ
GTYIYFDYEKWGQRKKEGFTFEYRYLEDRDLQ
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atggctggcatgctggtactctgttataaacattgtggtttgtgggttgtgggggcccag
aaggtggacccggcccagaaggagaaggaggaggtcggccagtggctcactaacaccata
gacacccccaacatgcaggtggaccagtttgagagtgaagtggagtcgctgtctgcgcag
acccggaagaagaagggggataaggataagcaggatcggatcgagggcttgaagcgccac
attgagaagcaccgctaccacatgcgcatgctggagaccatcctgcgcatgctggacgac
gactccatcctggtggactcgattcggaagatcaaggacgacgtggaatattatgtggac
tcctcacaggaccccgactttgaggggaatgagttcctttatgatgaccttgatctcgag
gacattccgcaggcgctggtcgccacttcacccccaacccacagccacatggaggatgag
atctttaatcagtccagcagcacacccacctccaccacctccagctctcccatcccaccc
agcccagccaactgcactacggaaaactctgaagatgacaaaaagagaggacggtcaaca
gacagtgaagtgagccagtctccagccaaaaatggctccaagcctgtccacagcaaccac
catccacattctcctgctgtgccatccagctacccggccggccctgcccctgtgccccct
gcactgggcaacgggcctggcagcaatggggctcctgtggcacctcccaaagccaaccct
gccccaggccacaatgccagcacccccaccccgtatgcccaggctgtggcccctcctgcc
ccgagcaccggctctgctcagcccaggccacccagcgtccaacctggtgggagcagcagc
aagcagaacggggctaccagctatagctccatggtggctgataattcatcagagctgagc
ctgagcagcagtgggagcagcagtagcagcagccaagccctgggtccccctcctggcccc
cacaacccaccacccaccaccacgaaggaggcggctggggcggccccagccggggcaggg
ggcgtgggcgggggctcagggagtggtgctggaggacccagcctcctggtgcccctgtct
gtgaaccctcccagctccccgacacccagcttcagtgagcccaaggcagctggggccctg
ctcaacggcccccccnagttcagcacagccctggaaatcaaggctcctgagcccctgagt
tccctgaagtccatggcagagcgggcagccatcagctctggcattgaggattccgtacct
gccctgcacctagctgagcgcgacatgctcctgggcagcagttcagcccctccggcttca
gcccagccacccctgcaactgtctgaggtcaacatccccctgtcactgggcgtctgcccc
ctggggcctgtggctctcaccaaggagcagctctaccagcaggccatggaggaggctgcc
tggcaccacatgccccacccttcggattcagaacgcatcaggcagtacctgcctcggaac
ccatgcccaaccccgctgtaccaccatcagatgccacctcctcgctcagacacggtggag
ttctaccagcgcctcccaacagagactctgttcttcatcttctactatctggagggcaca
aaggctcagtacctcgctgccaaggccctgaaaaagcagtcgtggcaatttcacaccaaa
tacatgatgtggtttcagcggcatgaggagcccaagaccatcacagatgagtttgagcag
ggcacctacatctactttgactacgagaagtggggccagcgaaagaaagagggcttcacc
ttcgagtaccgctacctggaggaccgggacctgcagtga
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