Trichosurus vulpecula (common brushtail): 118831327
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Entry
118831327 CDS
T10126
Symbol
VPS50
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
tvp Trichosurus vulpecula (common brushtail)
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tvp04131
]
118831327 (VPS50)
Membrane trafficking [BR:
tvp04131
]
Protein recycling
Others
EARP complex
118831327 (VPS50)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
ING
Motif
Other DBs
NCBI-GeneID:
118831327
NCBI-ProteinID:
XP_036594515
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Position
9:207287512..207349938
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AA seq
965 aa
AA seq
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MQKIKSLMARQGLKSPQDSLSDLSPIENLRLPSKEESRELREQPIDPQAQQEIINSIEDV
YFSTDSFDIVKYEMEKLPPVLSLQELEAYRDKLKQQQAAVSKKVADLILEKQPAYVKELE
RVTSLQTGLQLATVICSNGRRHLNIAKEGFTQASLGLLANQRKRQLLVGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQQAASTFRHYSCISELDSKLQDTLEQIEEQLDVA
LSKICKNFDVAHYTKVQQAYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNT
DTKFQKLQYKDLCTHVTVDSYIPCLADLCKALWEVMLSYYRTMEWHEAHDSEDTTRVAEG
GGMAGSEESNFDRNYVKKKLEHGLSRIWQDVQLKVKTYLFGTDMSTFKYDDFIFVLDIIS
RLMQVGEEFCGSKSEVLQESIRKQSINYFKNYHRTRLDELRMFLENETWELCPVKSSFSI
LQLHEFKFMEQSRSPSVSPSKQPASSASSVAPTLFEQYCSGGNPFEIQANSKDEETEDVL
ASNGYESDEPEKSAYQDYDSDSDVPEELKRDYVDEQTGDVPVKSVSRETLRSRKKSDYSL
NKVNAPILTNTTLNVIRLVGKYMQMMSMLKPIAFDVVHFMSQLFDYYLYAVYTFFGRNDS
LESTGLGLSSSRLRTTLNRIQESLIDLEVSTDPTGTLTVGEERKEKVPSPHLSHLVVLTS
GDTLYGLAERVVATESLVFLAEQFEFLQPHLDAVMPAVKKPFLQQFYSQTVSTASELRKP
IYWIVAGKAIDYEQMLLLMASVKWDVKEIMSQHNVYVDTLLKEFEQFNRRLTEVSKRVRI
PLPVSNILWEHCIRLANRTIVEGYANVKKCSNEGRALMQLDFQQFLMKLEKLTDIRPIPD
KEFVETYIKAYYLTENDMERWIKEHREYSSKQLTNLVNVCLGSHINKKARQKLLAAIDDI
DRPKR
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagatcaagtccctcatggcccgccagggtctcaagagcccccaggacagcctc
agtgacctgagccccattgagaatctgcggctgcccagcaaggaggaatcgcgggagctt
cgggaacagcccattgacccccaggcccaacaagaaatcatcaacagcattgaggatgtc
tacttctcgactgactcgtttgatattgtgaagtatgagatggagaagctccctcctgtc
ctcagtttgcaagaattggaggcatacagagacaaactgaagcagcagcaggccgctgtc
tctaagaaagtcgcagacttgatccttgaaaagcagccggcttatgtcaaggagctcgag
agagtaacctccctgcagacgggccttcagctggcaactgttatctgcagtaatggaaga
aggcacctgaatattgcaaaggagggttttactcaggccagtctgggccttctcgcaaac
cagaggaagcgtcagctgctggttggcctgctgaagtccttgaggaccataaaaacactg
caaagaacggatgtgcgcttgagtgagatgctggaggaagaagattatcctggagctatc
cagctctgccttgagtgtcagcaggcggccagcactttccgacattacagctgcatcagt
gaactagactccaagctgcaggacaccctggagcagattgaggagcagctggatgtggcg
ctctccaaaatctgcaagaactttgatgttgcccattacaccaaggtgcagcaggcctac
aggctcctggggaaaacgcagactgcaatggaccagctgcacatgcactttacacaggcc
atccacaacacagtgttccaggtggtcctgggctacgtggagctgtgcgcgggcaacaca
gacaccaagttccagaagcttcagtacaaggacctctgtacgcatgtaacagtggacagc
tacattccgtgcctggctgacctctgcaaagccctgtgggaagtcatgctcagctattac
aggaccatggagtggcatgaagcacacgacagtgaggacacgaccagggtggccgaaggg
ggtggcatggcggggtctgaggagagcaattttgatcgcaactacgtgaagaagaagctt
gaacacggactgtcacggatatggcaggacgtccaactcaaagtgaaaacctatctgttt
gggactgacatgtcaactttcaagtatgatgacttcatctttgtcttggatataatcagc
aggctgatgcaagtgggtgaagagttttgtggtagcaagtctgaagttcttcaggagtcc
atccgaaagcagagcatcaactacttcaagaattaccacaggacacgcctggatgagctg
aggatgttcttggagaatgagacctgggagctgtgtccagttaagtctagcttcagcatc
ttacagctccacgaatttaagttcatggagcagtcgcggtccccgtctgtgtccccgagt
aagcagccagcctcctcagcgtcctctgtggcccctaccttgtttgaacaatactgcagc
ggagggaacccctttgagattcaggcaaacagcaaggatgaggaaactgaagacgtgctg
gcttccaatgggtatgagtcagatgaacctgagaagagtgcgtaccaagactacgacagt
gacagtgatgtccctgaggagttaaagcgcgactacgtggacgagcagacaggggatgtc
cctgtgaagagcgtttccagagaaacgctaaggagccgaaagaaatcagattacagcctg
aacaaagtcaacgcccccatactgaccaacaccaccctgaacgtcattcggctggttgga
aaatacatgcagatgatgagcatgctgaagcccatcgcttttgacgtggtccacttcatg
tcgcagctgtttgactactacctctacgccgtctacaccttctttggccgcaatgactcg
ctggagtcgacgggcttgggcctaagcagcagccgcctgcggacgacgctgaaccgcatc
caggagagcttgatcgacctggaggtttccacggaccccacgggcaccctcacagtgggc
gaggagaggaaggagaaggtaccaagcccgcacctcagtcacctcgtggtcctgacatct
ggggacacgctgtacgggctggcagagagggtcgtcgccaccgagtccttggtcttcctg
gctgagcagtttgagtttctgcagccgcatctggatgccgtcatgcccgccgtcaagaaa
cccttcctgcaacagttttactctcagacggtttcgaccgccagcgagctgcgcaaaccc
atctattggattgtggcggggaaggccatcgactatgagcagatgctgcttctgatggcc
agtgtcaagtgggacgtgaaggagattatgtctcagcacaacgtctatgtggacacttta
ctgaaggagtttgagcagtttaaccggcggctgactgaggtatcgaagagggtccggatt
cccctgcctgtgtccaatattctgtgggagcactgtatccgcctggccaacaggacgatc
gtggagggttatgccaacgtgaagaagtgcagcaatgaaggtcgggccttgatgcagctc
gacttccagcagttcctcatgaagctggagaagctgacagacatcaggccaatcccggac
aaggagtttgtggaaacctacatcaaagcctattatctgactgagaatgacatggagcgc
tggatcaaggagcaccgggagtattcctccaagcagctgaccaacctggtgaatgtgtgc
ctgggctctcatatcaacaagaaggcacggcagaagctcctggcggccatagacgacatc
gataggcccaagagatag
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