Trichosurus vulpecula (common brushtail): 118831736
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Entry
118831736 CDS
T10126
Symbol
ABCA1
Name
(RefSeq) phospholipid-transporting ATPase ABCA1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
tvp Trichosurus vulpecula (common brushtail)
Pathway
tvp02010
ABC transporters
tvp04148
Efferocytosis
tvp04975
Fat digestion and absorption
tvp04979
Cholesterol metabolism
tvp05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
118831736 (ABCA1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
118831736 (ABCA1)
09150 Organismal Systems
09154 Digestive system
04975 Fat digestion and absorption
118831736 (ABCA1)
04979 Cholesterol metabolism
118831736 (ABCA1)
09160 Human Diseases
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
118831736 (ABCA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tvp02000
]
118831736 (ABCA1)
Transporters [BR:
tvp02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
118831736 (ABCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_23
Mst1_SARAH
Motif
Other DBs
NCBI-GeneID:
118831736
NCBI-ProteinID:
XP_036595067
LinkDB
All DBs
Position
9:6569767..6725552
Genome browser
AA seq
2260 aa
AA seq
DB search
MAFWSQLGLLLWKNFTFRRRQTCQLLLEVAWPLFIFFILISVRLSYPPYEQHECHFPNKA
MPSAGTLSWVQGIICNANNPCFRYPTPGESPGVVGNFDKSILSRLFSDARRLLLYSQRDT
SVQDTQKLLGTLQRLGTFNSSMKLQDFLVDNETFSEFLQHNLTMSYPAVEEVLDTDVSLQ
QALLYGYKWKLKDLCKKSNLTEWIKPHNRKTGELCDLPKEKLDAAEKVFFSNVDLLKPLL
EGINSYSILPNQELVETMTAMLESLGKLAKELSSMKSWSDMRQEVMFLTNANGSSSSTQV
YQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGGNNTEEEVTNFYDNSTTPYCNDLMK
NLESSPLSRIIWKALKPLLVGKILYTPDTPATRTVMSEVNRTFQNLGVFHDLKGMWEEIS
PKIWTFMENSQEMDLIRTLLDNKITSDLWGQHLNDLNWTTSDIAAFLAKYPEDVRRASGP
VYTWREAFNETNWAVQTIARFMECVNLDKLEPIPSEVRLINKSMELLDERKFWAGIVFTG
IAPDSVELPRHVKYKIRMDIDNVERTNKIKDAYWDPGPRADPFEDLRYVWGGFAYLQDVV
EQAIIRTLTGSEESTGIYVQQMPYPCYVDDIFLRVMSRSMPLFMTLAWIYSVAVIIKGIV
YEKEARLKETMRIMGLDNGILWFSWFISSLIPLLVSAGLLVLILKLGNLLPYSDPSVVFL
FLSVFAVVTILQCFLISTLFSRANLAAACGGIIYFTLYLPYVLCVAWQDYVGFSLKLFAS
LLSPVAFGFGCEYFALFEEQGIGVQWDNLFESPLEEDGFSLTTSISMMLFDTFLYGVMTW
YIESVFPGQYGIPRPWYFPFTKSYWFGEKSDDKSHLGSRQKGASEICMEEEPSHLRLGVS
IQNLVKVYRDGMKVAVDGLALNFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTAYIL
GKDIRSELSTIRQNLGVCPQHNVLFDMLTVEEHIWFYARLKGLSEKSVKEEMEQMVLDVG
LPHKLKTKTSQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELLLKYRQG
RTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLVKKDVDSSLSS
CRNSSSTVSYLKKEDSVSQSSSDAGLGSDHESDTLTIDVSAISNLITKHVSEARLVEDIG
HELTYVLPYEAAKEGAFVELFHEIDDRLSDLGISSYGISETTLEEIFLKVAEDSGVDAET
SDGTLPARRNRRAFGDRQSCLHPFTEDDAFDPNDSDVDPESRETDLLSGMDGKGSYQVKG
WKLTQQQFVALLWKRWLIARRSRKGFFAQIVLPAVFVCIALVFSLIVPPFGKYPSLELQP
WMYNEQYTFVSNDAPGDAGTQKLLDALTKSPGFGTRCMEGQSIPDMPCEVGEEKWATASV
PESVMNMFQRRNWTMENPSPSCECSSDKIKKMLPVCPAGAGGLPPPQRKQNTSDILQDLT
GRNISDYLVKTYVQIIAKSLKNKIWVNEFRYGGFSLGTSNMRGLPSNDEINVAISQVKKL
LQLTKDSSADRFLNSLGSFMTGLDTKTNVKVWFNNKGWHAIGSFLNVINNAVLRANLPEG
ENPRSYGITAFNHPLNLTKQQLSEVALMTTSVDVLVSICVIFAMSFVPASFVVFLIQERV
SKAKHLQFISGVKPVIYWLSNFVWDMCNYVVPATLVIIIFICFQQKSYVSSTNLPVLALL
LLLYGWSITPLMYPASFVFKIPSTAYVVLTSVNLFIGINGSVATFVLELFTNNKLNNIND
ILKSVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFVSPLSWDLVGRNLFAMAVEGV
VFFLITVLIQYRFFIKPRPVIAKLPPLNDEDEDVRRERQRILDGGGQNDILEIKELTKVY
RSKRKPAVDRICVGIPPGECFGLLGVNGAGKSSTFKMLTGDTTVTEGDAFLNKNSILSDI
QEVHQNMGYCPQFDAITELLTGREHVEFFALLRGVPEKEVGKVGDWAIRKLGLVKYGEKY
AGNYSGGNKRKLSTAIALIGGPPVVFLDEPTTGMDPKARRFLWNCALSVIKEGRSVVLTS
HSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIVVRIAGSNPDLKPVQEFFGV
AFPGSVLKEKHRNMLQYQLPSSLSSLARIFSVLSQNKKRFHIEDYSVSQTTLDQVFVNFA
KDQSDDDHLKDLSLHKNQTVVDVAILKSFLQDEKVRESYV
NT seq
6783 nt
NT seq
+upstream
nt +downstream
nt
atggccttttggtctcagttgggactgctgctttggaagaactttactttccgaagaagg
caaacatgtcagctgttgctagaagtggcctggcctctatttatcttcttcatattgatt
tctgtacgactcagctatccgccgtatgaacaacacgaatgccactttcccaacaaagcg
atgccttccgcaggaacactttcttgggttcagggaattatctgcaatgccaacaaccct
tgtttccgctatccgacccctggtgaatctcccggtgttgttggaaatttcgacaagtcc
attctttcacgactgttctcagatgctcggagactcctcttatatagccagagagatacc
agcgtgcaggacacacagaagcttttgggaactttgcagaggctggggactttcaactca
agcatgaagcttcaggatttcctggtggacaatgaaaccttctctgaatttttgcagcac
aacctcaccatgtcctatccagctgtggaggaggttctagacactgatgtcagtctccag
caggctcttttatacggctataagtggaagttgaaagacctttgtaaaaaatccaactta
acggaatggattaaaccccacaaccggaaaacaggagagctctgtgacctgccgaaagaa
aaactagatgcagcagaaaaagtcttcttctccaacgtggaccttctgaaacctctgctg
gaaggaataaactcctattcgatcctgccaaaccaggagctggttgaaacaatgacagct
atgctagagagtcttggaaagctggccaaagagctgtccagcatgaagagctggagcgac
atgagacaagaggtgatgtttctgaccaacgcgaacggcagcagttcctccacccaggtc
tatcaggcagtgtctcgcatcgtctgcggccatcctgaaggtggaggactgaagatcaaa
tcccttaactggtacgaggacaacaactacaaagccctgtttggaggaaataacaccgaa
gaggaggtgacaaacttctatgataattctacgactccttattgcaatgatttgatgaag
aatttggaatctagtcctctttcccgaattatctggaaggctctaaaacctctgcttgtt
gggaagatcctatatactcctgacactccggccacaagaacagtcatgtccgaggtaaat
agaacctttcagaacctgggagtattccatgacctgaaagggatgtgggaagagatcagc
cccaaaatttggacattcatggaaaacagccaggaaatggatctcatccggactctgttg
gacaataaaatcaccagcgatctttggggacaacacttgaacgacttaaactggaccact
tcagacattgcagcctttttagccaagtacccagaagatgtccggagagccagtggtccg
gtgtatacctggagagaggcttttaatgagacaaattgggcagtccagacaatagctcga
ttcatggagtgtgtcaacctggacaaacttgagccgataccttcagaagttcgactgatc
aacaagtccatggaattactggatgaaaggaagttctgggctggcatcgtgttcaccggc
attgctcctgacagcgtcgaactgcctcgccatgtcaaatacaaaatccggatggatatt
gacaatgtagaaaggaccaacaagatcaaggatgcgtactgggaccctggtcctcgagct
gatcccttcgaagatctgcgctatgtctggggaggcttcgcatacttgcaggatgtggtg
gagcaggcgatcatccggacgctgacgggctctgaggagagcaccggcatctatgtgcaa
cagatgccttatccctgttacgtagatgatatatttctgcgggtgatgagccgctcgatg
cctctcttcatgaccctggcttggatctactcggtggctgtgatcattaaggggatcgtg
tatgagaaagaagcccggctgaaggagaccatgagaatcatgggtttggacaacggcatc
ctttggtttagctggttcattagcagcctcatcccactccttgtgagtgcaggactactg
gtgttgatcctgaagctaggaaacttgctgccctacagcgaccccagcgtggtcttcctg
ttcctctccgtcttcgccgtggtgaccatcttgcagtgcttcctgatcagcacgctcttc
tccagagccaacttggctgcagcctgcggtgggatcatctacttcacgctctatctgccc
tatgtcctttgtgttgcttggcaggactatgtgggcttctctctgaaactttttgctagt
ctgctgtcgccggtagcatttgggtttggctgtgagtactttgccctctttgaggagcag
ggcattggagtgcagtgggacaacctttttgagagccctctagaggaagatggcttcagc
ctgaccacctcaatctccatgatgttgtttgataccttcctctatggtgtgatgacctgg
tatattgagtctgtctttccaggtcaatatggaatccccaggccgtggtatttccctttc
accaagtcttactggtttggtgagaaaagtgatgacaagagtcatcttggctccaggcaa
aaaggagcctcagaaatctgcatggaagaagagcccagccacctgcgcctgggggtttcc
attcagaacctggtaaaggtttatcgggatggcatgaaggtggcagtggatggccttgca
ctgaatttctatgaaggacagatcacgtcttttctgggacataatggagctgggaaaacc
accaccatgtccatcttgactggcttgttccctccaacctcgggcactgcctacatcctt
gggaaagatattcgttcagagctgagcacaataaggcagaacctgggggtctgtcctcag
cataatgtgctttttgacatgctgacggtagaggagcacatctggttctatgcccgccta
aaagggctgtcagagaagagtgtgaaggaggagatggagcagatggtgctggatgtgggt
ttgccgcacaaactgaaaactaagacgagtcagttgtctggcggaatgcagagaaagctg
tctgtggctttggcctttgttggaggatcgaaggtggtcattttagatgaacccacagcc
ggggttgacccgtactctcgaagaggcatatgggaactactcctgaaatatcgacaaggc
cgcaccatcatcctttctacgcaccacatggatgaggcagatatactgggcgacaggatt
gccatcatttctcatgggaagttgtgttgtgtcggatcctctctgtttttgaagaatcag
ctgggaacaggatactatctgaccctggtcaagaaggatgtggattcctccctcagttcc
tgtagaaacagcagcagcactgtgtcttacctgaaaaaggaggacagcgtttctcagagc
agctctgatgcaggcctgggcagtgaccatgaaagtgacaccctgactatagatgtttct
gctatttccaacctcattacgaagcacgtctcagaggctcggctggtggaggacatcggg
catgaattaacctacgtgctgccctacgaagctgccaaggaaggagcattcgtagagctt
ttccacgagattgatgaccgactctctgacctaggcatttcgagttatggcatctcagag
accacgctggaggagatattccttaaagtggctgaagacagtggcgtagatgcagagacc
tcagatggaaccttacctgcaagaagaaataggcgtgcctttggggaccgccagagctgt
ctgcacccatttactgaagacgatgcttttgatcccaatgactcagatgtggacccagaa
tcccgagagacagacctactcagtggcatggatggtaaaggctcctaccaggtgaagggt
tggaaactcacccaacagcagttcgtagcccttttgtggaagaggtggctgattgccagg
cgtagcaggaagggattttttgctcagatcgttctgccagcagtgtttgtctgcattgca
cttgtgttcagtctgattgttccaccttttggcaagtaccccagtctggaactgcagcca
tggatgtacaatgaacaatatacatttgttagcaatgatgctccgggagatgcaggcact
caaaaactcttggatgctctgaccaagagccctggttttggtacccgttgtatggaaggc
cagtcaattccagatatgccctgtgaggtaggcgaggagaaatgggccacagcttccgtc
cctgagtctgtgatgaacatgttccagagaaggaactggacgatggagaacccttcccct
tcctgtgagtgcagtagtgacaagataaagaaaatgcttcctgtgtgccccgctggcgca
ggtggattgcctcctccccagagaaaacaaaatacatctgacatccttcaggacctaact
ggaagaaacatatcagactatctggtgaagacctatgtccagatcatagccaaaagctta
aagaacaagatctgggtaaatgagttcaggtatggtggcttttcactgggtaccagtaat
atgcgtggattaccttcaaatgatgaaattaatgttgccatcagccaagtgaagaaactc
cttcagctgaccaaggacagttctgcagatcgatttctcaacagcttaggaagcttcatg
acaggactggacaccaaaactaatgtcaaggtgtggttcaataacaagggttggcacgcc
atcggctccttcctgaatgtcatcaataacgccgtcctcagagccaacttgcccgaggga
gagaatcctcgcagctatggcattactgcttttaatcaccctctgaatctgaccaagcag
cagctctctgaagtggctttgatgactacctccgtagacgtccttgtttccatctgcgtg
atctttgccatgtccttcgtcccagccagctttgtcgtgttcttgatccaggagcgcgtc
agcaaggctaaacatcttcagttcatcagcggtgtcaaacctgtcatttactggctttct
aactttgtctgggatatgtgcaactatgtggtacctgccactttggtcatcatcatcttc
atctgcttccagcaaaagtcctatgtgtcttccaccaacctgcctgtcctggctcttctt
ctcttactttacgggtggtcaataacccctctcatgtacccagcctcctttgtgttcaag
atccccagcacggcgtatgtggtcctcactagtgtgaacctcttcattgggattaacggc
agcgtggccacatttgtcttagagctcttcactaacaataagctcaacaatattaacgat
atcttgaagtctgtgttcctgatattccctcacttctgtctgggccgggggctaattgac
atggtgaaaaaccaggctatggcggatgcactagaaaggtttggagaaaaccgttttgtc
tctccactctcctgggacttggtgggaaggaacctctttgccatggccgtggaaggagtg
gtcttcttccttatcacagtactgatccagtacaggttcttcatcaagcccagacctgtg
attgcaaaacttcctcctctaaatgatgaggatgaggatgtgaggagagaaaggcaaagg
atattagatggtggtggacagaatgatattctagaaatcaaagaacttaccaaggtctat
agaagcaagaggaaacctgcagttgacaggatctgtgttggcatcccccctggagagtgc
tttgggcttctgggagtaaacggggccggaaaatcatcaacttttaagatgctcactgga
gataccaccgtgacagaaggagatgcttttctcaataaaaacagtatcttgtcagacatc
caggaagtacatcagaacatgggctattgccctcagtttgatgccatcactgaactgctg
acaggaagagagcacgtggaattctttgcactcttgagaggtgttcctgagaaagaagtt
ggcaaggttggcgactgggcaattcgaaaactaggccttgtgaaatatggagaaaagtac
gctgggaattacagcggcggcaacaagcgaaaactttcaaccgctattgctttgattggg
ggacctccagtggtgtttttggatgaaccaaccactggcatggatcccaaagcccgccgt
ttcttatggaattgtgccctaagtgtaatcaaggagggaaggtctgtggtgcttacctct
cacagcatggaagaatgtgaagctctctgcaccagaatggcaatcatggtcaacgggagg
ttcagatgtcttggcagtgtccagcacttaaagaacaggtttggagatggttacacaata
gttgtacgaatagcaggctccaaccctgacctgaagcctgttcaggaattctttggagtc
gcctttcccggaagcgtcctcaaagagaaacatcggaacatgcttcagtaccagcttcca
tcgtcactgtcttccctggccaggatattcagcgtcctttcccagaacaaaaagaggttc
cacatagaagattattccgtttctcagacaacacttgaccaagtatttgtaaactttgca
aaggaccaaagtgatgatgaccacttaaaggacctgtcattgcacaaaaaccaaactgtt
gtagatgttgcaattctcaaatcttttctgcaagatgagaaagtgagagaaagctatgtc
taa
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