Trichosurus vulpecula (common brushtail): 118831852
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Entry
118831852 CDS
T10126
Symbol
PALB2
Name
(RefSeq) partner and localizer of BRCA2
KO
K10897
partner and localizer of BRCA2
Organism
tvp Trichosurus vulpecula (common brushtail)
Pathway
tvp03440
Homologous recombination
tvp03460
Fanconi anemia pathway
Brite
DNA repair and recombination proteins [BR:
tvp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
118831852 (PALB2)
FA (Fanconi anemia) pathway
Downstream FA components
118831852 (PALB2)
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GFIT
Other DBs
NCBI-GeneID:
118831852
NCBI-ProteinID:
XP_036595210
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Position
9:complement(57506627..57528056)
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AA seq
1201 aa
AA seq
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MEDPAGKVLSCEEKEKLKEKLAFLKREYSKTLARLKRAQRAEKAKNSSKTEQNCMLKQEM
AIQTNSEPEDKVSLGDKLETCTLQINACLNAETKEKTAVELDFEPELSSTGDGLSGVCSE
RVGDNCQENFLYSITGPDNEKKQNKQPLNRMKNQKNTLVSKGSESFFGSDSLINAGQRQQ
RQVFSTENSELPVFQIRNQFSCGESEIQNSPTPITEISECPVATELENDASAILKENNLP
KMAALSLHNPLNDSNIQQLECVPLEEICDSYKLAAQCSMNLTHVSPKKLEEGGKEYVFSP
GDRMVNVDMNVDKKMSSTLTLPSDDRAFSANELSHSLSNTTHSDEQNHSLKPFRSSGNLL
DSRGENIQKKEVLSETVSPTIEIISPGPTENPLNSCTVLDGLLFPVEYYVRTTRQMSNCQ
RTVDLEAVIQSQLGVKRKGFKHKNKQVTKNLDLSSQEQSELPLSDQGSSSSPFQNSFSST
TEGSLAALPTEDNDFALNACKRRSSRRCRGKRFFCKKGIDDQDSELQVPDKLDIKKPKED
AALCKKAPRKKAHARGKKPITDKSRCMLANVNKKAPTSITQGKQDCIQKKDLQSSIGDDS
SIVDNTSFDLSFHLKNEILSFEKSSSSINITDFDLPDEDFGFLKLEKLKSYSAQQIEPFD
SGNGGKKCNDGDRLVLEELTPKKIVTEKENLAEDIITVTRNSQPKKPKHVPQNMLLFTPS
CTNLPNTNNQLEADVCSPVFPLLGATPVFGSQIHSGNVATEITGPTFCTPRCTYLKKPDN
LSGDNQCIKSPSALKLDTNMHSLGREVKKEPDQIVPSSERKFDSDCGSQETLPLVDSITS
KERPLLGSTFQTKVAEHPGEIWCDSLKLGNLQLVSKLKNPSDSCSVDVSTVWWEVTGCKE
SCIITACEFTVSLWKSLDNWQWRKVYTWHFTEIPVLQIIPLWDACNLVCVALGHLEIREI
RLLFCSDDECLKQSLVKSGNIKAVLGLRHKRLVCSNGTLHDHQVDLMTFSGSGRSKEKQT
LMSPEETILAFAEVQGMQDALLGTTLMSNIVIWNLKTGQLLKKMQIGNSYQASICHKAYS
DMGLLFVVLSHPHGKEIESMGSPIFQLIVINPKTALSADVRPYSLPQGHTGRFLDGEVKD
TLAAAVLTSGTIAVWDLFLGHCTALLLPNSDGNWSFVKWSGTDSCLLAGQKNGNVFVYSY
I
NT seq
3606 nt
NT seq
+upstream
nt +downstream
nt
atggaagacccagcggggaaagtgctcagctgcgaggagaaagagaagttgaaggaaaag
ctggcattcttaaaaagagagtacagcaagacactggctcgattgaagcgtgctcaaaga
gctgagaaggcaaaaaattcttcgaagactgaacagaattgcatgcttaaacaggaaatg
gccatacaaacaaactcagagccagaagacaaagtatctcttggtgataaattagaaaca
tgcacactacaaatcaatgcctgtcttaatgcagaaaccaaggagaaaacagctgttgaa
ctggactttgagcctgagttatcgagcactggtgatggcttatcaggagtatgttctgaa
cgtgtaggtgataactgccaggagaatttcctttatagcatcactggaccagataatgag
aaaaagcaaaataaacagccattgaatagaatgaagaaccaaaaaaatacactagtatca
aaaggaagtgaatccttctttggttctgattcacttataaatgctggacaaagacagcaa
agacaggtgttttctacagaaaattctgagttaccagtgtttcagataagaaatcagttt
tcttgtggtgagagtgagatccagaattctcccacaccaatcacagaaatcagtgaatgt
cctgttgctactgaacttgaaaatgatgccagtgcaattttgaaagaaaataatctccct
aagatggctgcactttctttacacaatcctttgaatgacagtaatattcagcaacttgag
tgtgttcctcttgaagaaatctgtgatagctataaactggctgcccagtgttcaatgaat
cttactcatgtttcacctaaaaaattagaggaaggagggaaagaatatgttttctctcca
ggtgaccggatggtaaatgttgacatgaatgtggataaaaagatgtctagcactctcacc
ttgccatcagatgacagagcattttctgcaaatgagctcagtcattccttaagcaacacc
acacattctgatgaacagaatcatagcttgaagcctttcagatcttctggtaacctactt
gatagtagaggtgaaaatattcaaaagaaagaggttctaagtgagactgtgagccctacc
atagaaataatctctcctggtcctacagaaaatccactaaattcttgtacggtgcttgat
ggtcttctgtttcctgtggaatattatgttaggacaacacgacaaatgtcaaactgtcag
aggacagtagacctggaagctgtaattcagagccaattaggtgtaaaaagaaagggattt
aagcataaaaataaacaggtaactaaaaatttagatctgtcctcacaagagcaaagtgaa
cttccattatctgaccaaggaagttcaagtagtcctttccaaaactctttctcatcaacc
actgaaggtagccttgctgctttgcccactgaagacaacgattttgctctgaatgcttgt
aaaagacgatcaagtagaagatgcagagggaaaagattcttttgcaaaaaaggaatcgat
gaccaggactcagagctgcaagttcctgacaagctggatattaaaaaacccaaggaagat
gctgccttgtgcaaaaaagccccaaggaaaaaagcacatgctcggggtaaaaaaccaatc
acagacaaatcaaggtgtatgcttgctaatgttaacaaaaaagcacccacatcgataaca
caagggaaacaagattgtattcaaaaaaaggaccttcaatcttccattggtgatgactcc
tcgattgtggataataccagttttgatctttcatttcatcttaagaatgagatactcagt
tttgagaagtcatcatcaagcatcaacatcactgactttgacttgcctgatgaggacttt
ggttttcttaagcttgagaaattaaagtcttactcagcacaacaaattgaaccttttgat
tcaggaaatggtggaaaaaagtgtaatgatggagaccgtcttgttttggaagaactgacg
cctaaaaaaatagttacggaaaaggagaatttagcagaggatattattactgtaacaaga
aactcacagccaaaaaaaccaaagcatgttcctcaaaatatgctacttttcacgccttct
tgtactaacctacctaacacaaataaccagcttgaagcagatgtgtgttctcctgttttc
cctctcctaggtgccactccagtatttggctcccaaattcacagtggaaatgtggctaca
gaaattactggacctactttttgtacacctagatgtacttacttgaaaaaaccagacaat
cttagtggagataatcagtgtatcaaatcacccagtgcattgaaattggatactaacatg
cattcattaggtagggaagtcaaaaaggagcctgaccaaatagtaccttcttctgaaagg
aaatttgacagtgactgtggttctcaagaaactcttccattggttgactcgatcacttcc
aaagaaagaccactattgggaagcactttccagactaaagtagcagaacatcctggtgaa
atttggtgtgatagtttgaaactgggtaacctacagctagtttcaaagttaaagaatcct
tcagattcctgttctgtggatgtgagtactgtgtggtgggaagtaaccggctgtaaggag
tcatgtatcataactgcctgtgaatttacagtttctctctggaaatctctggataactgg
caatggagaaaagtttacacatggcatttcacagagattccagtactacaaatcattcca
ctttgggatgcttgtaatcttgtgtgtgttgctttgggacatctagaaattagagaaatc
agattattgttttgttctgatgatgaatgcttaaagcagtcacttgtaaaatctggaaat
ataaaagctgtgcttggacttagacacaagaggctagtgtgtagcaatgggacccttcat
gatcaccaagtagacctcatgaccttttcaggatctggaagaagtaaagaaaaacagacc
ttgatgtctccagaagaaacaatcttggcttttgctgaggttcaagggatgcaagatgct
ttgcttggcacaactctgatgagcaatattgttatctggaatttaaaaactggtcaactt
ctgaaaaagatgcaaattggtaattcctaccaagcttcaatctgtcacaaagcctattct
gatatggggctcctgtttgttgttttaagtcatcctcatggtaaagaaattgaatcaatg
ggaagtcctatatttcaattgattgtaatcaatcctaagacagcccttagcgcggatgta
cggccctactcacttccccaaggccatactggaaggtttctggatggcgaggtgaaggat
actttagcagcagctgtactaacttctggaacaatagctgtttgggacttgtttctagga
cactgtactgctctgcttctgcccaattctgatggaaattggtctttcgttaaatggtca
ggtacggattcttgtctactagctggacagaaaaatggaaatgtctttgtgtacagttac
atataa
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