Trichosurus vulpecula (common brushtail): 118832666
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Entry
118832666 CDS
T10126
Name
(RefSeq) LOW QUALITY PROTEIN: exosome complex component MTR3-like
KO
K12587
exosome complex component MTR3
Organism
tvp Trichosurus vulpecula (common brushtail)
Pathway
tvp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
118832666
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tvp03019
]
118832666
Messenger RNA biogenesis [BR:
tvp03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
118832666
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Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
118832666
NCBI-ProteinID:
XP_036595895
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Position
X:37879113..37880050
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AA seq
312 aa
AA seq
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MPGDHRRIKGPEESQSPMLYAPPDQVLEVNTQDYVPARDPLRQRPVYVRVGQQSQATGSA
YFESGDTKLVVSVFGPRQAEGGEPPIGLKGRLVCDFRRAPFSTPGPRRSPSGSNEEKEMS
QALHEALLPAVRLERYPRVLLEVSVLVLVDSGSTLAAGITAASLALADAGIEMFDLVVGC
SLALPSGPYAPWLLDPVLYEEQRAVVHLTVALMPVTNQVAGILGSGEGLSTDRWAEGVRL
AIEGCQRLYPTLHACLVRANKRRXERSPSPSPLRESGREGASRRGTSNDSTISTISTASR
RLCRACPARRVC
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgcctggagatcacagacgcatcaaaggtccggaggagtcgcaatcacctatgctttat
gctcctccggatcaggtgctagaggtgaacactcaggactacgtccctgctcgagaccct
ctgcgccagcggcctgtgtatgtgagggtgggtcagcagagccaggccaccggctctgcc
tacttcgagtcgggggacaccaagcttgtggtgtctgtgtttggcccacgtcaagccgag
ggtggggagccaccgatcgggctcaaaggccgtctggtatgcgacttccgccgggcacct
ttctcgaccccgggccctcgcagatctccttcgggtagcaacgaggagaaggagatgagc
caggcccttcacgaggcgctcctgcccgccgtgcgcttggagcgctaccccagagtcctg
ctcgaagtatccgttttggtactcgtggatagcggctcaaccttggcagctggtatcacc
gccgcatctttggccttggcagacgccggcatagagatgttcgacctcgtggtgggctgc
agtctggccctgccctcaggtccctatgcgccctggctcttagatccggtcttatacgag
gagcaacgcgccgtggttcacctcaccgtggcgcttatgcccgtcactaaccaggtggcc
ggcattttgggcagcggagagggcctctccaccgaccgctgggcagaaggcgtgcgcctt
gccatagagggctgccaacgcctttaccccaccttgcacgcgtgcctagtgagagccaac
aagaggaggngagagagaagcccgagtccaagcccactccgagagagtggcagagaggga
gcgagccggcgaggaacctcgaatgactctaccatttccaccatttcaaccgcctcccga
cgactatgtcgagcctgcccagcccgccgagtctgttga
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