Trichosurus vulpecula (common brushtail): 118832709
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Entry
118832709 CDS
T10126
Name
(RefSeq) protocadherin-11 X-linked-like
KO
K16498
protocadherin delta 1
Organism
tvp Trichosurus vulpecula (common brushtail)
Pathway
tvp03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
118832709
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tvp01009
]
118832709
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tvp04515
]
118832709
Protein phosphatases and associated proteins [BR:
tvp01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
118832709
Cell adhesion molecules [BR:
tvp04515
]
Cadherins
Protocadherins
118832709
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
Fibulin_C
He_PIG
Motif
Other DBs
NCBI-GeneID:
118832709
NCBI-ProteinID:
XP_036595932
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All DBs
Position
X:complement(13825822..14349180)
Genome browser
AA seq
1326 aa
AA seq
DB search
MFILSSLQIIFRFFLRNIISIAEMSYLSGTLTLGLLLGCLVFASGTQEKNYTIPEELPEN
VLIGDLVKDLGLKFSPEKRLSTPLQFKLVYKSEDLPLVRVEETSGELYTTDVRIDREQLC
SGVFSETHCFYEVELVIFPEEVFKLVKLRFLIEDINDNSPLFPATVINISIPENSAISSR
FPIPSAVDPDVGINGIQQYHLIKGFDIFGLDVIETPEGEKWPLLIVQKMLDREERDTYVM
KLKVEDGGSPPRSSTAILQVSVIDLNDNGPIFAETEVEVAIPENAPVGSSVYQLRATDAD
VGANAQIQYFFSNLMNQLARKLFNLNNTTGLITIKEPLDREQAPIHKLMVVATDGGPMPA
RAMVIVNVTDVNDNSPIIDVRYIIDTVNGTVYLSENAGLNTKIAVITLIDKDADRNGRVT
CFTEHDIPFRLKPVFENQFLMESSSFLDYETTKEYEIKLLASDAGKPPLNYTTSVVIKVK
DENDNAPIFSRSSIRVSVLENNAPGAQLTKISATDADSGKNAEITYLIAGDPPSAFSLDR
RTGILSAVEQLDREKKDKYTFTVTARDNGVPHLQSNATVIVTVLDQNDNSPTFTHSEYNF
YVPENLPKHGTVGLITITDNDAGENGAITLTILNSNGTFIIDSTNGVIRPNITFDREKQE
SYTFIVMATDGGRVPRSASAKVTINVVDINDNRPVFIFPPTNYTFQFVPLATEVGTLLYV
VMAIDEDTGMNAEIRYQIEDGNQKKLFEVEGASGNITLKSKLDRADQGLHKLLIKARDLG
QPDSMNSKILLNLFVNDSLNNSTFVDELLRRTLAKDIVIQPVEKKKKEVPTPSTGDYIKY
IIAIISGSMTAVLTIVVAALLRCRVFPRLKAARQQNSEWVTPNPNNSETITLSANDDTGT
NSVILNLATFAESGTDDLDNDEEEVTTSLDVAVDMEEDTMERYNWGTHSSTFKPDVPDLA
EHYKATSPQPAFHIEPETPVHSKCHGIQELPMDNTFVMGCDSLSKCSSSSSDPYSISDCS
CQGTIKTTATIHPRQAASQLGMTDSDLKDPNVIAIRTYPMHLMPATRPRTPLREPAIQET
AVDTWTSAQRKPEPKKPGKGQRRVTFYLPESSQESGSDRGPIEAEAGATASARPGYARRD
YRNRTTTHSNRTEGDGNSDPETACIYGLKKAAEITVQPTLEEASDNCTQECFILGHSDSC
WMPAAVPQYRPPRSPEPAVTRYSSPAPHLITTTAMCHNPPEPQAAAISTSPPQAQSQEVG
HGATAEARGAQGGVVTQDDSNQGRRCSPRALFCTAQHDESIKVIPMTTFTPGQSSRGSPN
IEEDPM
NT seq
3981 nt
NT seq
+upstream
nt +downstream
nt
atgtttatcctttccagtttacaaattatttttcggttttttctgaggaacataatatcc
attgccgagatgagttatctttctggaactctcacattgggtctcctgctaggttgtctc
gtatttgcatctggcacgcaggaaaagaattatacaataccggaagagcttcctgaaaat
gtcctgataggcgatctggtgaaagatctaggcttgaagttctcaccagagaaaaggctc
tcgactcccttgcagtttaagttagtatacaagagtgaagatctgccattagtgagggta
gaggagacaagtggtgagctctataccaccgacgtacgaatagatcgcgaacaattatgc
tctggagtcttttctgagactcactgtttttatgaagttgaactagttattttcccagaa
gaagtctttaaactggtcaagcttcgttttctaatagaagatatcaatgataattcaccg
ctctttcctgcgacggtcatcaacatttcgattcctgagaactctgctatcagttcccga
tttccgataccttcagctgttgatcctgatgttggcattaacggaattcaacagtaccat
ctgattaagggtttcgatatatttggccttgatgtcattgaaacacctgagggagaaaaa
tggcccctactaattgtccaaaagatgctggatcgggaggagagagacacatatgtgatg
aaattgaaagtcgaagatggtgggtcacctccaaggtccagcacagccattttacaagtt
tctgtgattgacctgaatgacaacggtcccatctttgcggagacagaggttgaagtcgcc
atccctgaaaatgctcctgtgggctcttcagtctatcagcttcgtgccactgatgctgat
gtgggtgcaaatgcacagatccagtactttttcagcaatctgatgaaccaacttgctagg
aagcttttcaatctcaacaataccactggcctcattaccatcaaggagcccttggatagg
gagcaggcacctattcacaagctaatggttgtagcaaccgatggaggtccaatgccagct
agggctatggtgatagtgaatgtcacagatgtcaacgacaactccccgataattgatgtc
agatacatcatcgatacagtcaatgggactgtgtacttatcagaaaatgctggactcaat
accaaaattgctgtcattacactaatagacaaagatgctgatcgtaatgggagagtgacc
tgtttcacagaacatgacattcctttccgattaaagccagtatttgaaaatcaattcctg
atggagagttcctctttcctggactatgagactacaaaagaatatgaaataaaattgctg
gcttcagacgctggcaaaccccctttgaattacactacttcagttgtgatcaaagtcaaa
gatgaaaatgacaacgcacccatcttcagccggtccagcataagggtttctgtcctagag
aacaatgctcctggcgctcagctgacaaaaatcagtgcaacggatgcagacagtggaaag
aatgcagagatcacttacctgatagctggcgaccccccctctgctttcagcctggataga
cgtacaggcattctctcagcagtggaacaactagatagagaaaagaaagacaaatacacc
ttcacagtcactgcaagggacaatggggtgcctcacctgcagtccaatgccacagtgatt
gtaacagtccttgatcagaatgacaacagccctactttcacccacagtgagtacaacttc
tacgtcccagaaaacctacccaagcatggcacggtgggactcatcactataactgataat
gatgctggagaaaatggggctatcactctcaccattctaaatagcaatgggactttcatc
attgattcaacaaatggagtcatccgacccaatatcacttttgatagagagaaacaagag
tcttacactttcatcgtcatggccacagacggaggcagggtgccacgatctgcatctgcc
aaggtgaccataaatgtagttgatattaatgacaacagaccagttttcattttccctccg
actaactacacttttcagtttgttccactagctactgaagttggcacacttctgtacgta
gtgatggctatcgatgaggacactggcatgaatgccgaaatccgttaccaaattgaagat
ggaaaccaaaagaaattatttgaagtggaaggagcatcagggaacattaccctgaaatca
aaacttgatcgggcagaccaaggtttacacaagctgttgatcaaagctagggacttagga
caacctgactctatgaatagcaaaatactactaaatctatttgtgaatgatagtctgaac
aattctacctttgtcgatgaactactgcgcagaactctggctaaagatatagtcatccag
cctgttgaaaagaaaaagaaagaagtcccaaccccatcgactggtgactatatcaagtac
atcattgccatcatttctggctccatgactgctgtcctgaccattgttgtcgctgcttta
ttacgttgccgcgtttttccacgcctcaaagctgcaagacagcagaattcagaatgggtt
actccaaatccaaacaacagcgagacaataacccttagcgcaaatgacgacactggcact
aatagtgtcatccttaaccttgccacctttgccgaatctgggactgatgatctagataat
gacgaagaagaggtcactacctctttagatgttgccgttgatatggaagaagacaccatg
gagaggtacaactggggtacccattcttctacttttaagcctgatgttcctgatttggcc
gaacactacaaagcgacatctcctcagccagccttccatattgagcccgagactcccgtg
cattcaaaatgccacggcatccaggagctgcccatggacaacacttttgtgatgggctgt
gactctctttccaaatgttcctctagcagctcagatccatatagcatttctgactgtagc
tgtcaaggaaccatcaagactacagccaccattcacccccgacaggctgcaagccagctc
gggatgactgactctgatttaaaggatccaaatgtgatcgctatccggacttaccctatg
catttgatgccggctactagaccccgtactccactgagagagccagctattcaggagaca
gctgtggacacctggacttctgctcagaggaaaccagagccgaaaaaaccaggaaagggt
cagcgccgtgtcacattctaccttccagaaagctcccaggagagcggcagtgaccgtgga
cctattgaggcagaagccggtgctactgctagtgccaggcctggctacgctcggagagac
taccgtaaccgcacaactacacacagcaaccgtaccgaaggagacggcaactctgaccct
gaaactgcttgcatttatggactcaagaaagctgcagaaataactgtccagccaaccctt
gaagaagcctctgacaactgtacccaagaatgctttatccttggccattccgactcttgc
tggatgcctgctgcggtgccccagtatcggccacctcgctctccggagcctgctgtaacc
cgctacagttctcctgctccacatctgatcacgaccacagcgatgtgccacaatcctcct
gagccccaggctgctgctatttccaccagtcccccccaggcacagagccaagaagtgggg
catggtgctacggctgaagcaaggggtgctcaaggaggagttgttacacaggatgactct
aatcagggacgaagatgcagtcccagagccctgttttgcacagctcaacatgatgaatca
atcaaagtcattcccatgacgaccttcactcccggccaatcttcacggggctctcccaat
attgaagaggatcccatgtaa
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integrated database retrieval system
