Trichosurus vulpecula (common brushtail): 118833097
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Entry
118833097 CDS
T10126
Symbol
HCFC1
Name
(RefSeq) host cell factor 1 isoform X1
KO
K14966
host cell factor 1
Organism
tvp Trichosurus vulpecula (common brushtail)
Pathway
tvp03083
Polycomb repressive complex
tvp04980
Cobalamin transport and metabolism
tvp05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
118833097 (HCFC1)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
118833097 (HCFC1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
118833097 (HCFC1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tvp01009
]
118833097 (HCFC1)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tvp03036
]
118833097 (HCFC1)
03029 Mitochondrial biogenesis [BR:
tvp03029
]
118833097 (HCFC1)
Protein phosphatases and associated proteins [BR:
tvp01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
118833097 (HCFC1)
Chromosome and associated proteins [BR:
tvp03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
118833097 (HCFC1)
HMT complexes
COMPASS/SET1 complex
118833097 (HCFC1)
MLL-HCF complex
118833097 (HCFC1)
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
118833097 (HCFC1)
Mitochondrial biogenesis [BR:
tvp03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
118833097 (HCFC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_HCF
Kelch_KLHDC2_KLHL20_DRC7
Beta-prop_FBX42
Beta-prop_ATRN-LZTR1
Kelch_1
Kelch_2
fn3
Kelch_FKB95
Motif
Other DBs
NCBI-GeneID:
118833097
NCBI-ProteinID:
XP_036596387
LinkDB
All DBs
Position
X:8526547..8556027
Genome browser
AA seq
2225 aa
AA seq
DB search
MASGLQPAAASAAAASASASSSSAAAAASAAAGSSMAQLLQPRWKRVVGWSGPVPRPRHG
HRAVAIKELIVVFGGGNEGIVDELHVYNTATNQWFIPAVRGDIPPGCAAYGFVCDGTRLL
VFGGMVEYGKYSNDLYELQASRWEWKRLKAKAPKNGPPPCPRLGHSFSLVGNKCYLFGGL
ANDSEDPKNNIPRYLNDLYILELRPGSGVVAWDIPITYGVLPPPRESHTAVVYTEKDNKK
SKLVIYGGMSGCRLGDLWTLDIETLTWNKPTLSGVAPLPRSLHSATTIGNKMYVFGGWVP
LVMDDVKVATHEKEWKCTNTLACLNLDTMAWEAILMDTLEDNIPRARAGHCAVAINTRLY
IWSGRDGYRKAWNNQVCCKDLWYLETEKPPAPSRVQLVRANTNSLEVSWGAVPTADSYLL
QLQKYDIPAAAAAATSPAANPVPSVPINPPKSPAPAAAAPAVQPLAQVGITLLPQAAATP
PTTTTTIQVLPTVPGSPIPVPTTGRTQGVPAVLKVTGPQATAGTPLVTVRPASQPGKAPV
TVTSLPAGVRMVVPTQSAQGTVIGSNPQMSGMAALAAAAAATQKIPPSSAPTVLSVPAGT
TIVKTVAVSPGTTTLPATVKVASSPVMVSNPATRMLKTAAAQVGTSVSSAANTPTRPIIT
VHKSGTVTVAQQAQVVTTVVGGVTKTITLVKSPISVPGGSALISNLGKVMSVVQTKPVQT
SAVTGQASTGPVTQIIQTKGPLPAGTILKLVTSADGKPTTIITTTQASGTGTKPTILGIS
SVSPNTTKPGTTTIIKTIPMSAIITQSGATGRGVGQGPRDMYPNTITLQKSPDTTSWVSP
NGLNSESGYKVQAGVTSSPGIKSPITIITTKVMTSGTGTPAKIITAVPKIATGHGQQGVT
QVVLKGAPGQPGTILRTVPMGGVRLVTPVTVSAVKPTVTTLVVKGTTGVTTLGTVTGTVS
TSLAGAGGHNTNASLATPITTLGTIATLSSQVINPTAITVSAAQTTLTAAGGLTTPTITM
QPVSQPTQVTLITTPSGVEAQPVHDLPVSILASPTTEQPTATVTIAESGQGDVQPGTVTL
VCSNPPCETHETGTTNTATTTVVANLGGLQQPTQVQFVCDRQEAGASLVTSAMGQQNGSV
VRVCSNPPCEIHETGTTNTPTVVSANLTVPTLLGAGQIVCSNPPCETHETGTTNTATSSM
AGQHMYSNPPGQPLETGTTNIAASNMAGQQVCSNPPCETHETGTTNTATTATSNMTGQRV
CTNPPCETHETGTTSTATTAMSNMGSGQPATASQQRETHHTHITNTPTTALSNTGTGEPE
GAQAPAKAPCQTHQTSATSTTMTVKAAPRVCASPSCESGATATGSMGPSASGGGTSTGLG
QLAFISRQSEVQHTHTTNTPTTARSTMGAGEANGVQGPTKPSCQTHQTSSTSTTMTVKAT
EVLCPAAAAASTCSNPPCETHETGTTNTATTSNAGTLQQVCSNPPCETHETGTTHTATTA
TSNVGSSQLGQQIPASPHCETHQTTSTGTTMTVNFGVPLSGASPSQKTLEAALDSAAAPA
PSPGQRVCTNPPCETHETGTTHTATTVTSNMSSNQDPPPATGNPGEPENTQGESMATTSS
STMTTTVSSTQTRAVTTVTQSTPVPGPSVPNISAMTEMPPDAMATEASVSATIAVAVTSA
DAQEVALSATDILQPLEEIPSETEAPQHLLQPPSASGGEQAEGPSATHSPDLQAAVDMSG
AGAPSPGQEAASSAVVTAVMVQPQPQPEVDQLSLPQELMAEAQAGTTTLMVTGLTPEELA
VTAAAEAAAQAAATEEAQALAIQAVLQAAQQAVMGAGEPMDTSDAAAVAQAELGHLTAEG
QEGQPTSIPIVLTQQELAALVQQQQQLQEAQAQAQAQVHHHHHHLPTEALAPADSLNDPA
TESNGLSDLASAVTSTVALLPSTATESLAPSNTFVAPQPVVASPAKLQAAAALAEVANGI
ESPVGKPDPLPPPMKATAKKENQWFDVGVIKGTNMMVMHYFLPPDDAPSDDDSGTIPDYN
QLKKQELQPGTAYKFRVAGINACGRGPFSEISAFKTCLPGFPGAPCAIKISKSPDGAHLT
WEPPSVTSGKIIEYSVYLAIQSSQAGEPKSSAPAQLAFMRVYCGPNPSCLVQSSSLSNAH
IDYTTKPAIIFRIAARNEKGYGPATQVRWLQESSKDSSSSKPASKRPLSSPEMKSAPKKS
KADGQ
NT seq
6678 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgggtctgcagcccgcggcggcatccgccgccgccgcctccgcctctgcctcc
tcctcctctgcagccgcggccgccagcgcagccgccggtagctcaatggctcagctcctg
cagccgcgctggaagcgcgtggtgggctggtcgggacccgtgccgcgaccccgacacggc
caccgcgccgtggccattaaggagctcatcgtggtgtttggtggcggcaacgagggtatc
gtggacgagttgcacgtgtataacacggcaaccaaccaatggttcatccctgcggttcga
ggggacatccccccaggctgtgcagcctatggctttgtgtgtgatgggactcgcctgctg
gtgtttggtgggatggtggaatatgggaagtacagcaacgacctctacgagttgcaggca
agcaggtgggaatggaaaaggcttaaagcaaaagcccccaaaaatgggcctcctccatgc
cctcgacttgggcacagcttttctctcgtgggcaacaaatgctacctgtttgggggtttg
gctaacgacagcgaggatcccaagaacaacattccgaggtacctgaatgacctatacatc
ctggagttacgaccaggctctggcgtggtagcctgggacatccccatcacttatggggtc
ctgccaccccccagggagtcccacacggctgtagtctatacagaaaaggacaacaagaaa
tccaagctggttatctacgggggaatgagtggctgcaggcttggggacctctggacttta
gatattgagaccctgacctggaataaacctactctcagtggggtggctcctctccctcgg
agtcttcattctgcaaccaccataggaaacaaaatgtatgtgtttggtggttgggttcct
cttgtcatggatgacgtcaaagtggccacacatgagaaggagtggaagtgcaccaacaca
ctggcctgtctcaacttggacaccatggcatgggaagctattctgatggacacactggag
gacaacatcccccgggctcgagctgggcactgtgctgtggccattaatacccggctctat
atctggagtgggcgagatggttaccgaaaggcgtggaataaccaagtctgctgtaaggac
ctctggtacctagagacagaaaagcctcctgccccatcccgggtgcagctggtccgagcc
aacaccaactccctggaggtgagctggggagcagtgccaacagctgacagctatctcctg
cagctccagaagtatgacattcctgctgctgctgctgctgccacctcacctgcagccaac
ccagttccatctgtgcctatcaatccccccaagagccctgccccagctgcagcagcccct
gccgtgcagccactggcccaggttggcattacactgctcccacaggcagctgcaaccccc
ccaaccaccaccaccaccatccaggtcttgccgacagtgcctggcagccccatccctgtg
cccaccacaggtcggactcaaggtgtccctgctgttctcaaagtgactggcccccaggct
acagcaggaactcccctggtcactgtgcgaccagccagccaacctggaaaagctccagtt
actgtgacttcgctgcctgctggtgtccgaatggttgtgccgacacagagtgcccagggg
acagtgattggcagcaaccctcagatgagtggaatggcagccctggcagcagcagctgca
gccacccagaagatccctccttcctcagctcccacagtactgagtgtccctgcagggacc
accattgtcaaaacagtagctgtgtctcctggcaccaccacacttccagccacagtcaaa
gtggcctcctcgccagtcatggtgagcaacccagccacccggatgctaaagacagcagca
gctcaagtgggcacatcagtgtcctcagctgccaacactcccacccgccctatcatcact
gtccacaagtcaggcactgtgactgtggctcagcaagcccaggtggtgaccactgtggtt
ggtggggtcaccaaaaccattactctggtgaaaagccccatctctgtcccaggcggcagt
gcactgatttctaatctgggcaaagtgatgtcagttgttcagaccaaaccggttcagacc
tcagcagtcacaggccaggcttctactggccctgtgactcagatcatccagaccaaagga
cccctgccagccggtaccattctgaagctggtaacgtcagcagatggcaaacctaccacc
atcatcaccaccacccaggccagcgggactggaaccaaacccaccatcttgggcatcagc
agtgtctcccccaataccaccaaaccgggcaccaccaccatcatcaaaaccatccccatg
tcggctatcatcacccagtccggagcgacgggtaggggcgtcgggcaggggccgcgcgat
atgtacccgaatacaattactctccaaaagtcacccgacacaacatcctgggtgtccccc
aatgggctgaattctgagtcggggtataaggtccaggctggtgtaaccagcagccctggt
attaaatcccccatcactatcatcaccaccaaggtcatgacatcgggcacaggcacacct
gccaaaatcatcactgctgtccccaaaattgctactggacacgggcagcagggcgtaacc
caggtggtgttgaagggagcccctggacagccaggcaccatccttcgaacagttcccatg
ggtggggtgcggctcgtcaccccagtcacagtatcagctgtcaagccgactgtcaccacc
ctggtggtaaagggcaccacaggagtcacaacccttggcactgtgactggtacggtgtct
accagccttgctggagcaggtgggcataacactaatgcctccctagccactcctatcacc
accctgggcaccattgccaccctttcaagccaggtgatcaatcctacagccattactgtg
tcagctgcccagaccactctgacagcggcaggagggctcaccacccccaccattaccatg
cagcctgtttctcaacccactcaagtgacgttgattaccacacccagtggagtagaggcc
cagccagtgcatgacctgcctgtctccatcttggcctcacctacgacagagcagcccaca
gccacagtcacaatcgctgaatcaggccagggcgatgtgcagcccggcactgtcacatta
gtgtgctccaaccccccctgtgagacccatgagacgggcactactaatacagccactaca
actgtagtagcaaatcttgggggtctccagcagccaacccaggtccaatttgtttgtgac
aggcaggaggcaggtgcctcactggtgacttcagcaatgggacagcagaacggcagcgtg
gtgcgggtctgttcaaaccccccttgtgaaatccatgagacaggcaccaccaacactccc
actgtggtcagtgccaacctaacagtccccacactgctaggggcagggcagattgtgtgc
tccaaccccccctgtgagacccatgagacagggaccaccaacacggccacttctagtatg
gctgggcagcacatgtactccaacccccctggccagcccctggaaacaggtaccaccaat
atagctgcatcgaacatggctgggcagcaagtatgctccaaccccccgtgtgagacccat
gagacgggtaccaccaacacagccactaccgccacatccaacatgactgggcagcgtgtg
tgtacaaaccccccgtgtgagacccatgagacaggaaccaccagcactgccactactgcc
atgtccaacatgggctcagggcagccagcaactgccagccagcagcgtgagacacatcac
actcacataaccaatacccccaccacagccctatctaatacgggcactggggagccagag
ggagcgcaggctcccgccaaggccccttgccaaacccatcagaccagcgcaaccagcacc
accatgactgtgaaagctgctccccgggtttgcgccagtccatcctgtgagtctggtgcc
accgccacaggttctatggggccatcagctagtgggggtggtaccagcacaggcttaggg
caactagccttcatcagccggcagtctgaggtacagcatacccacacaacaaacaccccg
actacagcccggtccaccatgggcgctggggaggccaatggggtacaggggcccacaaag
ccctcatgccaaacacatcagaccagttccaccagcaccactatgactgtgaaagccaca
gaggtgctttgcccggccgctgccgccgcctccacctgttccaacccaccttgtgaaacg
catgagactggtaccaccaacacagccactacctcgaatgcaggcactctccagcaggtg
tgctccaacccaccctgtgagacccacgagactggcaccacacatacggccaccactgcc
acctccaatgtaggctccagtcagcttgggcagcagatacctgctagccctcattgtgag
actcaccagaccacctccactggcaccaccatgacagtcaactttggtgtcccactctct
ggggccagcccctcccagaagaccctggaggcagccttagattctgcagcagcaccagcc
ccctccccagggcagagggtgtgtaccaaccccccctgtgaaacccatgagacaggcacc
acacatacggccaccactgtcacctcaaacatgagctcaaaccaagacccaccgccagct
acaggtaatccaggggagccagagaacacccaaggagaaagcatggccaccaccagctcc
agtaccatgaccacaacagtgtcttccacccagacccgagctgtgaccactgtgactcag
tccacgccagttcctggcccttcagtgccgaacatttcagcgatgacggagatgcctcct
gatgccatggctacagaagcgtctgtctcagccacaatagcagtggctgtgactagcgca
gacgcgcaggaggtggccctctcggccacagacattctccagcccttagaggagatccca
tctgagacagaagctccgcagcacctcttacagcccccctctgcttctggaggggagcag
gccgagggcccatcggccactcacagccctgacctacaggcagcagtggacatgagtggg
gctggggcgccctccccaggccaggaggctgccagttcagcagtggtgaccgctgtcatg
gtgcagccgcagccgcagcctgaggtggaccaattgtctctgccccaagagctgatggct
gaggctcaggctggcaccacaacccttatggttacaggccttaccccagaggaattggca
gtgacggcggcagcagaggctgcagcccaggcagcagctactgaggaagcccaggccctg
gcaatccaggctgtgctccaggcagcccagcaggccgtgatgggtgccggcgagccaatg
gacacgtccgatgcagctgcagtggcccaggcggagctggggcacttgaccgccgagggc
caggaggggcagcctacttccatccccattgtgctgacccagcaggaactggctgctttg
gtgcagcagcagcaacagttgcaggaggctcaggcccaagcccaggctcaggtgcaccat
caccaccaccacctgcccactgaggctctggcccctgctgacagcctcaatgacccagcc
acggaaagcaatggcctcagtgacctagccagtgctgtcaccagcactgtggcccttcta
ccttccacagcaacagagagtttggctccatccaacacgtttgtggctcctcagccagtg
gtggctagtccagcgaaactccaggcagctgctgccctggctgaggtagctaatggcatc
gagtcaccagtggggaaaccagatcccctgcccccacccatgaaagccacagcgaagaag
gaaaaccagtggtttgatgtcggggtcatcaaaggcaccaacatgatggtgatgcactat
ttcctgcctccagatgatgccccgagtgatgatgactcaggcactatccctgactacaac
cagctaaagaagcaagagctccagccaggcacagcctacaagttccgtgtcgcaggtatc
aatgcctgtggccgggggcccttcagtgagatctcagcctttaagacttgtctgcctggc
tttcctggggctccctgtgccattaaaatcagtaaaagtccagatggtgcacacctcacc
tgggagccaccttcagtgacctcaggcaagatcattgagtactcagtatacctagccatc
cagagctcccaagcaggtgaaccgaaaagctcagccccagcccagctggccttcatgcgg
gtctactgtgggcctaacccgtcctgcctggtgcagtcctccagcctctccaatgcccac
attgactataccaccaagcccgccatcatcttccgcattgctgcccgcaatgaaaagggt
tacggccctgccacacaagtcaggtggttgcaagaatctagcaaagacagctccagctca
aagcctgccagcaagcggcccttgtcctcgccagaaatgaaatctgctccaaagaaatcc
aaggcagatggccagtga
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integrated database retrieval system
