Trichosurus vulpecula (common brushtail): 118833105
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Entry
118833105 CDS
T10126
Symbol
ZC3H12B
Name
(RefSeq) probable ribonuclease ZC3H12B
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
tvp Trichosurus vulpecula (common brushtail)
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tvp03019
]
118833105 (ZC3H12B)
Messenger RNA biogenesis [BR:
tvp03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
118833105 (ZC3H12B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
UBA_N4BP1_C
zf-CCCH_2
zf-CCCH_4
Omega-toxin
Motif
Other DBs
NCBI-GeneID:
118833105
NCBI-ProteinID:
XP_036596395
LinkDB
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Position
X
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AA seq
839 aa
AA seq
DB search
MTVWFLVKMLRMKKRSSKEGRNPQQGATEDCSIDSDDWTSSESEPEQLGLRNPNHPQWQE
QGLPPKPHRQLCRSPCLDQPSFSQSSTQQDPKLEEDKQPPVDKEYQAKMDFALKLGYAGE
QIQAVLSKLGSDALINDILAELVRLGNKSEEEGQKSGGAEHGHAARDVTSPELSLEDETA
DNTENLRPVVIDGSNVAMSHGNKEGFSCRGIQLAVDWFLEKGHKDITVFVPAWRKEQSRP
DAPITDQDILRKLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLAFDSDGIIVSNDNYRDL
QNEKPEWKKFIEERLLMFSFVNDKFMPPDDPLGRHGPSLENFLRKKPVIPEHKKQPCPYG
KKCTYGHKCKYYHPERANQPQRAVADELRISAKLSAIKTMSEGALAKGGGAAPAPASKSE
PSSEGKRVTPKRQSDPSIRSVAVETEERLPIIRKPETNSAPSLVTALSVPTLPPSKSHAA
GALNTRSASSPVPGSSQFTHQKSSLEHTASMQYPPILVTNSHGTSVGYTEQYPKYESLGD
HGYYSLMSDFSNLSVNSCRGADYYGAEPDRHARSMYSRNASPCHDKHMSHTSSDPYSSYS
DLYLGVVDASQEDAMKVNRSCSQNHLQPFSHGYHEALTRVQSYGPDEPKQAPPKHPAPRL
VLHAQHPVVGARSSCPGDYPVPQSIHPPGAAPPGRALVMTRMDSVSDSRLYDGNPMRQRR
PPLCREQHASWDPLPYPAADSYNYHSYPLSTNLMQPCYEPVMVRSMPEKMEQIWRNPWVG
MCGQPREHHMIPEHQYQTYKNLCNIFPVGIVLSVMEKNPHMTDAQQLAAMIVAKLRSGR
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atgacggtctggttcctggtgaagatgctaagaatgaagaagagatcttccaaagaaggg
aggaaccctcagcagggagccactgaggactgtagcatcgactctgatgactggaccagc
tctgagagcgagccagaacagctgggcttgcgaaatcccaaccacccccaatggcaagaa
caaggactgccccccaagccgcaccggcagctctgccgctccccttgcctggaccaaccc
agcttctcccagagcagcacccagcaggacccaaaactcgaagaggacaagcagccccct
gtggacaaagagtaccaggccaaaatggactttgctttaaaactcggctatgctggggag
cagattcaagccgttctgagcaaactgggctcagatgccctcatcaacgacatattggct
gaacttgtgaggctagggaacaagagtgaggaagagggccagaagagtggaggggcagaa
catggccatgctgccagggacgtgaccagcccggagctgtccctggaagacgagactgcg
gacaacaccgagaacctgagacctgttgtcatagatggaagtaatgtggccatgagccat
gggaacaaagaaggcttctcctgcaggggaatacaattagccgtggactggtttctggag
aaaggccataaagatattacggtatttgtacctgcatggcggaaggagcagtctcgccct
gatgcgccaattacagatcaagatatcttacgtaaactggagaaagaaaagattcttgtc
tttaccccatcccgaagagtgcaaggcaggagagtcgtctgctatgatgaccgtttcatc
gtcaaattggcttttgactctgatggcatcattgtgtctaatgataactaccgggatctt
cagaatgagaagcctgagtggaagaaattcatagaagagaggctactgatgttttccttc
gtcaatgacaagtttatgcctccggatgaccccttagggcgccatggcccaagtctggaa
aatttcttaagaaagaaacctgtgattcctgaacataagaagcagccatgcccttatggc
aaaaagtgtacgtatggccacaagtgtaaatactaccacccagagcgtgccaaccagccg
cagcgggcggtggcagatgagctccgcattagcgccaagctgtcggctatcaaaaccatg
agcgagggagccttggccaagggtggcggtgcagccccagcgcctgcttccaagagtgaa
cctagctccgaagggaagcgcgtcactcccaagcgtcagtcagatcccagcatccggtct
gtggctgtggaaactgaggagagactgcctatcattcggaaacctgaaaccaactcggcc
ccctccctggtgacggcactgagtgtccccacacttcccccttccaaaagccatgcggca
ggtgccctgaacacccgctctgcaagcagcccagtgcctggttcctcacaattcacccat
cagaaatcttccctggaacatacagccagtatgcaatacccacccatcctggtcaccaat
agccatggcacctctgtcggctacactgagcagtacccaaagtatgagtctttgggggat
catggctactactccttgatgagtgacttctctaacctaagcgtcaacagttgccgtggt
gcagactactacggggctgagccggaccgtcacgcccgcagcatgtattctcgcaatgcc
agcccctgccatgacaaacacatgagccatacaagtagtgatccttattcctcgtacagc
gatttgtatttgggcgtagtagatgccagtcaggaagatgctatgaaggtgaaccgatcg
tgctcacaaaaccatctccagcctttttcacatggttaccatgaagccttaacaagagtg
caaagttatggtccagatgaacccaagcaggctccccctaaacatccagccccccgatta
gtgttgcatgcccaacacccagtagttggagcccgatctagttgtcctggagactaccct
gtgcctcagagcatccacccccccggcgcagctccgccaggccgagcattggtgatgacg
cggatggacagtgtttctgactcccgcctctatgatggcaacccaatgaggcagaggcgg
ccacccctgtgccgggagcagcacgccagctgggaccctctgccctatcctgctgccgac
tcctacaattatcactcttatcctttgagcaccaacctcatgcagccctgttacgagccg
gtcatggtgagaagcatgcccgaaaagatggagcagatctggaggaatccctgggttggg
atgtgtggccagccaagggaacatcacatgatccccgaacaccagtaccaaacctataag
aacctctgcaacatcttcccagtcggcatcgttctctcggtgatggagaagaatcctcac
atgactgatgcgcagcagctggcagccatgattgtggccaagttgagatcgggacgctaa
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