Trichosurus vulpecula (common brushtail): 118833373
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Entry
118833373 CDS
T10126
Symbol
TOP3A
Name
(RefSeq) DNA topoisomerase 3-alpha
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
tvp Trichosurus vulpecula (common brushtail)
Pathway
tvp03440
Homologous recombination
tvp03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
118833373 (TOP3A)
03460 Fanconi anemia pathway
118833373 (TOP3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tvp03032
]
118833373 (TOP3A)
03400 DNA repair and recombination proteins [BR:
tvp03400
]
118833373 (TOP3A)
Enzymes [BR:
tvp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
118833373 (TOP3A)
DNA replication proteins [BR:
tvp03032
]
Eukaryotic type
DNA Topoisomerases
118833373 (TOP3A)
DNA repair and recombination proteins [BR:
tvp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
118833373 (TOP3A)
FA (Fanconi anemia) pathway
118833373 (TOP3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
Zn_ribbon_GRF_2
zf-C2H2_10
Lar_restr_allev
Zn_ribbon_recom
DUF6510
Motif
Other DBs
NCBI-GeneID:
118833373
NCBI-ProteinID:
XP_036596629
LinkDB
All DBs
Position
1:complement(500439944..500478752)
Genome browser
AA seq
1007 aa
AA seq
DB search
MIFPAVRSGLRAVRSLLGLQSRPLSRDAMEVALRGSRRVLCVAEKNDAAKGIADLLSGSR
MRRREGLSKFNKIYEFDYQLYGQNVTMVMTSVSGHLLAHDFQMPFRKWQSCNPLVLFEAQ
IEKYCPDNFVDIKRTLEKEAKQCQSLIIWTDCDREGENIGFEIIHVCKAVKPNLRVFRAR
FSEITANAVRSACQHLTEPDQRVSDAVDVRQELDLRIGAAFTRFQTLRLQKIFPEVLAEQ
LISYGSCQFPTLGFVVERFKAIQAFVPESFHKIKVTHEHEDGVVDFSWKRHRLFNHTACL
VLYQMCMEDPVATVVEVGSKPKSRWRPLPLDTVELEKLASRKLKINAKETMKIAEKLYTQ
GYISYPRTETNIFPKDLNLTTLVQQQIHDQQWGAFAQRILDRGGPTPRNGKKSDQAHPPI
HPTKYTCDLQGNEQRLYEFIVRHFLACCSEDAQGQETTVEIDIAQERFVAHGLMILARNY
LDVYIYDKWSDKVIPIYEKGSSFQPTTIEMVDGETSPPQLLTEADLIALMEKHGIGTDAT
HAEHIETIKSRMYVGLTPDKRFLPGHLGMGLVEGYDSMGYEMSKPDLRAELEADLKLICE
GKKDKHVVLRQQIQKYKQVFIEAVAHANKLDEALSQYFGEMTAAVGQEEIYPAMPATIKK
CPQCNKDMVLKRKKNGGFYLSCMGYPDCRKAIWFPDSVLEASKDESVCPVCKPHPVYRLK
LKFKRGSVPPTMPLEFVGCIGGCDETLMQIMDLRSSNGPSRASQPASQPTNHLQTNQSLN
RMGNNQGSYSISPTERQTGLPKPPTRTLVPSAATNENHNTVMCNCGQEALLLTVRKEGPN
QGRQFYKCNMGSCNFFLWADSQQGTEMAPSSRTRTPSHFQGNSTNSGGRQNRFGNHGSNS
SSATCMCNQPAITRTVQKEGPNKGRQFHTCSKPREQQCGFFQWADENMAPGTSGPVWFGG
RGQVPGSEAKSKRPRTNSDTEPTTKRIRKCGLCHQPGHTRLTCPQNR
NT seq
3024 nt
NT seq
+upstream
nt +downstream
nt
atgatttttccggccgtgcgctcgggcctccgcgccgtccggagcctgctggggctgcag
agccgccccctgtcccgggacgccatggaggtggctctccgaggcagccgccgagtcctg
tgtgtggcggagaagaacgacgcggccaaaggcatcgcggacctgctgtccggcagcagg
atgcggaggagagaaggattgtccaaattcaataagatctatgagtttgactaccaacta
tatggccagaatgtaaccatggtaatgacttctgtttctggacatttgcttgctcatgat
ttccagatgccgtttagaaaatggcagagctgcaaccctcttgtactctttgaagctcaa
attgaaaaatactgcccagacaactttgtagatattaagagaactctggagaaagaggcc
aaacagtgccagtctctgataatctggactgattgtgatcgagagggagagaacattgga
tttgaaatcatccatgtgtgcaaagctgtgaaaccaaatctccgagtatttagagccaga
ttctctgaaatcactgcaaatgctgtcagatcggcctgtcagcacctgactgagcctgat
cagagagtgagcgatgctgtggatgtgagacaggaattagacctgaggataggtgctgcc
ttcacaaggttccagaccttaagacttcagaaaatctttccagaggtgctggcagagcag
ctgatcagttatggtagctgtcagttcccaacattgggatttgtagtagaaaggttcaaa
gccatccaagcttttgtgccagagagcttccacaaaattaaagtgactcatgagcatgaa
gatggcgttgtggacttcagctggaaaagacatcgtctctttaaccatacagcgtgtctt
gtcctctatcagatgtgcatggaggatccagtagccacagtggtagaagttggatctaag
ccgaagagcagatggaggcccctgcctttggatactgtggaactcgagaaattggcttct
cgaaagttgaagataaatgccaaagaaaccatgaaaattgctgaaaagctctatactcag
gggtatatcagctatccccgaactgagacaaatattttccccaaagacttaaacctgaca
actttggtacagcagcagatacatgaccaacaatggggagcctttgcccagagaattcta
gacaggggtggccctacccctcgtaatgggaaaaagtctgatcaagctcatcctcccatt
caccccaccaaatacacttgtgacctgcaggggaatgaacaacgactgtatgagtttatt
gttcgccatttcctagcctgttgctctgaggatgcccaaggacaagaaacgactgtagag
attgatattgctcaagagcgcttcgttgctcatggtctcatgattctggccagaaactat
ctggatgtttatatatatgataaatggagtgacaaggtcattcccatctatgagaaaggc
tcctccttccagccaaccacaatagaaatggtggatggtgagaccagcccaccccaactc
ctcacagaagcagatctcatcgccctcatggagaaacatggcattgggacggatgcaact
cacgcagagcatatcgagaccatcaaatcacggatgtacgtgggactcacccctgataaa
cgattcctcccaggacatttgggcatgggattggtggaaggttatgattccatgggctat
gagatgtctaagcctgacctccgggctgagctagaagctgacctgaaacttatttgtgag
gggaaaaaggataagcatgtggtcctgagacagcaaatccagaaatataagcaagttttc
attgaagctgtggcccatgccaacaagctggatgaagcgttgtctcagtattttggagaa
atgaccgcagcagttggccaagaggaaatctacccagcaatgccagccactatcaagaag
tgtccacaatgtaacaaagatatggtgctcaagaggaagaagaatggcggcttctacctt
agctgcatgggctatccagactgccgaaaagctatatggtttccagattctgttctagaa
gccagtaaggatgaaagcgtgtgtccagtctgcaaaccacatcctgtttacaggttgaaa
ttaaagttcaagcgtggaagcgtccctcccaccatgcctctggagtttgttggctgcatt
ggaggttgtgatgagaccctaatgcagatcatggacctaagatcttccaatggcccttcc
agagcttcacagccagcaagccagcctaccaaccatttacagaccaaccagtccctgaac
agaatgggcaacaaccagggcagttattccatttctcccacagaacgacaaactggactc
cctaagcccccaaccaggacacttgtgccctcagcagccactaatgagaatcacaacact
gtgatgtgtaactgtggccaggaggccctcttgctcactgtccgtaaagaagggcccaat
cagggcaggcagttctacaagtgcaacatgggcagttgcaacttcttcctgtgggctgat
agtcagcagggaacagaaatggccccttcctcaagaacaaggactcctagtcatttccaa
gggaactccacaaattctggaggaaggcaaaataggtttggaaaccatggcagtaatagc
agcagtgccacatgcatgtgcaatcaacctgccatcacacgaactgtgcagaaggagggg
cctaacaagggccggcagttccacacgtgctcaaaaccgagggagcagcagtgtggcttc
ttccagtgggctgatgaaaacatggcaccaggaacttctggtccagtttggtttggggga
agagggcaggtcccagggtcagaagccaaaagcaaaagacctaggactaactcagacact
gagcccacaacaaagagaatacgaaaatgtggcctctgtcaccagcctggacacacccgg
ctcacctgccctcagaacagatga
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