Trichosurus vulpecula (common brushtail): 118833722
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Entry
118833722 CDS
T10126
Symbol
RNF40
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1B
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
tvp Trichosurus vulpecula (common brushtail)
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tvp04121
]
118833722 (RNF40)
Enzymes [BR:
tvp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118833722 (RNF40)
Ubiquitin system [BR:
tvp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
118833722 (RNF40)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRE1B
CC_Bre1
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
BRE1
EzrA
zf-RING_5
zf-RING_2
zf-RING_UBOX
zf-rbx1
SpoIIE
Motif
Other DBs
NCBI-GeneID:
118833722
NCBI-ProteinID:
XP_036596998
LinkDB
All DBs
Position
1:complement(521382879..521393709)
Genome browser
AA seq
1010 aa
AA seq
DB search
MSGAGNKRAAGDGGSGPSEKKQNREEKTTTTLIEPIRLGGISSTEEMDLKVLQFKNKKLA
ERLEQRQACEDELRERIEKLEKRQATDDATLLIVNRYWAQLDETVEVLLRRHEGRGELLS
RMEDPGTQDGTDPDGTPLPEPGTTERRDLPTLQLRPPLSEPALAFVAALAASSSEEVELQ
LQGRMEFSKAAVSRVVEASDRLHRRVEELCHRVQSRGECESIGEGLRTLTRELGQDNRRL
QDLTTQLQEKHHRISLEYSELQDKVTSAETKVLEMETSVEDLQWDIEKLRKREQKLNKHL
AEALEQLNSGYYVSGSSGSFQGGQITLSMQKFEMLNAELEENQELANSRMAELEKLQAEL
QGAVRSNERLKVALRSLPEEVVRETGEYRLLQAQFSLLYNESLQVKTQLDEARGLLLATK
NSHLRHIEHMESDELSLQKKLRTEVIQLEDTLAQVRKEYEMLRIEFEQNLAANEQAGPIN
REMRHLISSLQNHNHQLKGDAQRYKRKLREVQAEIGKLRAQTIGSGPSAPSQTASEDQGS
GGGGALAPVKEEESSGSGPAVLQEVKKESVSAPVTPTASTATVVKKEEPPFEEEVPLTQA
QTPHPTPQTPASRSREAEPRGKREPRDREGPGSGTPTSSSSRGDRDKAKAEESKRKESEL
LKGLRAELKKAQESQKEMKLLLDMYKSAPKEQRDKVQLMAAERKAKAEVDELRGRIRDLE
EKERKESKKLADEDALRRIRLAEEQIDHLQRKLGATKQEEEALLSEMDVTGQAFEDMQEQ
NGRLIQQLREKDDANFKLMSERIKSNQIHKLLREEKDELGEQVLGLKSQVDAQLLVVQKL
EEKERVLQGSLGSVEKELTLRSQALELNKRKAVEAAQLAEDLKVQLEHVQSRLREIQPCL
AESRAAREKESFNLKRAQEDISRLRRKLEKQKKVEVYADADEILQEEIKEYKARLTCPCC
NTRKKDAVLTKCFHVFCFECVRGRYEARQRKCPKCNAAFGAHDFHRVYIS
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggggccggcaacaagcgcgcagccggggatgggggctcgggcccctcggaaaag
aagcagaatcgagaggagaagaccacgaccacccttatcgagcccatccgcctgggaggc
atctcctccacggaggagatggacctgaaggtgttacagttcaagaacaaaaagttggca
gagcgactggaacaacgccaggcctgcgaagatgaattaagggagcgaattgaaaagctg
gaaaagcgccaggccactgatgatgccacattgctcattgtcaaccgctactgggcccag
ctagatgaaaccgtagaggtcctactacgacgacatgagggacgaggagaattgctttct
aggatggaggacccgggaacccaagatggtactgaccctgatgggacccctctgcctgaa
ccaggaaccacagagagaagagatctgcccaccctccagcttcggcccccactgagcgag
ccggctttggcttttgtggcagccctggcagccagcagtagtgaagaggtagaacttcag
ctccagggccgcatggagttctccaaggcagccgtgtccagagtagttgaggcctcagac
cgactgcatcgtcgagtagaagagctgtgtcatcgggtccaaagccgaggagagtgtgag
tccattggggaaggacttaggactttaaccagggagcttggacaggacaacaggcgactg
caagacttgaccacacaactgcaggagaagcatcaccgaatctctctggaatactcagaa
ctccaagacaaggtgacatcagcagagaccaaggtgctggagatggagacttcagtggag
gatctgcagtgggacattgagaaactgcgcaaacgggagcagaaactcaataagcacctc
gctgaggctctggagcagctcaactcaggctactatgtatcagggagttcagggagtttc
caagggggccaaatcacactcagtatgcaaaagtttgagatgctgaatgctgagctagaa
gagaaccaggagttggccaatagccgcatggcagagttagaaaagcttcaggcggagcta
cagggcgctgtgcggagcaatgaacggctcaaggtggcccttcggagcctgcctgaagag
gtggtaagagagactggtgagtaccgactgctccaggctcagttttctctgctctacaat
gagtccttgcaagtgaagacccagctagatgaggcacgggggctactcctggctaccaag
aactcccatctcaggcacattgagcacatggagagtgatgagctgagtctgcaaaagaag
cttcggactgaggtgattcagctagaggacacattagcccaggtgcgcaaagagtatgag
atgcttcgaatcgaatttgagcagaacctggcagccaacgaacaggcagggcccattaac
cgggagatgagacacctgatcagcagcctgcaaaaccacaaccaccagctgaagggtgat
gcacagcggtataagaggaagctgagggaagtgcaggcggagattggcaagctccgggca
cagactattggctcaggcccttcggccccatcccaaactgcctctgaggatcagggatca
ggaggagggggagcattggccccagtgaaagaagaggagagttctgggtcagggccagct
gttctccaggaggtcaaaaaagagtcagtctcagccccagtaacccccacagcttctaca
gccaccgtggtgaagaaagaagagcccccttttgaagaggaggtgcctcttacccaggcc
caaaccccccaccctacaccccaaacccctgcttccaggagccgggaggctgagcctcga
ggtaaacgagagccccgggaccgggaagggccaggttctggaaccccaacatcctcttcc
tcaaggggagatcgagacaaggccaaggctgaggagagtaagaggaaagaatcagaatta
ctcaagggacttcgagcagagctcaagaaggcccaggaaagtcaaaaggaaatgaaactg
cttctggacatgtacaagtccgcccccaaggagcagagggacaaagtgcagctcatggct
gcagaacgcaaggccaaggctgaggtagatgagcttcggggccgcatccgggatttggag
gagaaggaaaggaaagagagtaagaagttggcagatgaggatgctcttcgaaggatccgg
ttggcagaggaacagattgatcacctgcagcgcaaacttggggccaccaagcaggaagag
gaggctctgctttcagagatggacgtgactggtcaggctttcgaggacatgcaagagcag
aatggtcgccttatacaacagctgcgagaaaaagacgatgccaacttcaagctgatgtca
gagagaatcaagtccaaccagatacataagctgctccgggaagagaaggatgaactgggg
gaacaagtcttgggcctcaagtctcaggtggatgctcagcttttggtggtacagaaacta
gaagagaaggagcgagttcttcagggcagcctggggagcgtagaaaaggagctaacccta
cggagccaagccctggagcttaataagaggaaggcagtggaagcagcacagctggctgag
gacctcaaggtgcagctggaacacgtgcagagtcggcttcgagaaatccaaccctgtctg
gcggagagccgagcagcgcgagagaaggagagtttcaacctcaagagggcccaggaggac
atttctcgacttcggcggaagctggagaaacagaagaaggtagaggtctatgctgatgct
gatgagattctacaggaggagataaaggaatacaaggcccggttgacctgcccctgctgt
aacacccggaagaaagatgctgtcctcaccaagtgctttcatgtcttctgctttgagtgt
gtgcggggccgctacgaggcccgccagagaaagtgcccaaagtgtaatgctgcttttggg
gctcatgacttccaccgtgtctatattagctga
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