Trichosurus vulpecula (common brushtail): 118833727
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Entry
118833727 CDS
T10126
Name
(RefSeq) helicase SRCAP isoform X1
KO
K11661
helicase SRCAP/SWR1 [EC:5.6.2.-]
Organism
tvp Trichosurus vulpecula (common brushtail)
Pathway
tvp03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
118833727
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tvp03036
]
118833727
Chromosome and associated proteins [BR:
tvp03036
]
Eukaryotic type
Chromatin remodeling factors
SRCAP complex
118833727
SWR1 complex
118833727
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HSA
ResIII
DEAD
HDA2-3
Motif
Other DBs
NCBI-GeneID:
118833727
NCBI-ProteinID:
XP_036597005
LinkDB
All DBs
Position
1:complement(521408015..521434942)
Genome browser
AA seq
3093 aa
AA seq
DB search
MQSSPSPAHPQLPVLQTEQMVSDSMTGSNPVSPASTDSPASSGAGGISPQHLAQDSSLDG
PPGPPDVSSVPLVGLGLPQPADPASKGPKWEKSHAEIAEQAKHEAEIETRIAELRKEGFW
SLRRLPKVPEPARPKGHWDYLCEEMQWLSADFAQERRWKRGVARKVVRMVIRHHEEQRQK
EERAKREEQAKLRRIASSIAKEVKQFWSNVEKVVQFKQQSRLEEKRKKALDLQLDFIVGQ
TEKYSDLLSQSLNQPLAPTPSKAGSSPALGSSHTGSAASSPPPPVLPQLDDEDGDFQPQE
EEEDDEETIEVEEQQEGNDAETQRREIELLRREGELPLEELLRSLPPQLLVASSSPTQVP
SSSDADSQEVLEEDGEEEEPHQGSKRKHPAPVTHRNKQLWHPDEEDEEFRADEDEAEDEE
DTIAAEEQLAGEVDHATELSELAREGELSVEELLQQYAGAYASDASVPGSGSSEDEEDED
DATSSESEQDQEEEEHPEEDSSSQSESAEEAIEEEEENVSEEEEASENSDSEESEVSEQS
EEAQPRNQADEEEEEEDDDFGVEYLLAQDEERSEVKEDSGPAAPGPPPSLGPKKEITDIA
AAAESLQPKGYTLATTQVKTPIPLLLRGQLREYQHIGLDWLVTMYEKKLNGILADEMGLG
KTIQTISLLAHLACEKGNWGPHLIIVPTSVMLNWEMELKRWCPSFKILTYYGAQKERKLK
RQGWTKPNAFHVCITSYKLVLQDHQAFRRKNWRYLILDEAQNIKNFKSQRWQSLLNFNSQ
RRLLLTGTPLQNSLMELWSLMHFLMPHVFQSHREFKEWFSNPLTGMIEGSQEYNEGLVKR
LHKVLRPFLLRRVKVDVEKQMPKKYEHVIRCRLSKRQRCLYDDFMAQATTKETLATGHFM
SVINILMQLRKVCNHPNLFDPRPVTSPFITPGICFSTASLVLQATDTHPLQRVDMGRFDL
IGLEGRVSRYEADTFLPRHRLSRRVLLEVATAPDPPPRPKPVKMKVNRMLQPVPKPEGRT
VVVVNSPRTPLSPAPARPPGPEHSAQLTSGPTAPVLPAPLLVSSSSPGAPLSPASRPPGP
VLLPPLQPNSGSLPQVLSPPLGVLGGTPRPPTPALPLKPSPPAPVRLSPSAPPGSSSLLK
PLTVPPGYAFPAAAPPTPGPQRLILSPDMQARLPSGEVVSIGQLASLAQRPVPSTGGSKP
LTFQIQGNKLTLTGAQVRQLAVGQPRPLQMPPAMVNSSGVVKIVVRQAPRDGLGPSPQLA
PPPRPSSSGLPALLTPRPALPSGRLPTPPLGPTRSPLPTLVRPLLRLLHSPPPETTASVP
GSAPVPISSSSLPVSTSLPGSSSSPLSSPILSPLPISVSSPLAGPVSSPLPSSCSTSLPI
PISAPLSNPNSSPLPVLAPLPVSVSTTALLPTVASAVSTPASSAQSPLGVVSSAPASTLG
LSTTSSPVPVQAPVHLPTLASTSTNVQSPNQTGAPTPTPVLVSASALASPVPTISSPAST
QAPILTPSSTAPQALTSSLAPGPVPPTAILASSPVPIPVLAPSPSPTPVLVPSPTPVPIL
SPSSVPVSTLTSTPSLVPAPTPVLAPSSTQTLVPAIVPTASVGPPSTQTLTLAPALAPPL
SSSTQTLSLAPVPPLGPSPAQTLSLAPVSPLGPTPVQTLSLAPATPLGPSPAQTLSLAPA
APMGPSPAQTLALAPTSPLGPTQTLSLAPVPSLGPAQALSLAPTPPLGPSPAQTLSLAPA
SPLGSPPAHALTLAPAQTLNLTPAQVPVPPLGPTPAQTLTLAPAQTISSAPLPSSLLAPT
SGPAPSQVAMVSRLPVAKDEPETLTLRSGPPSPPLPATSFCGARPRRQPPPPPRSPFYLD
SLEEKRKRQRAERLERLFQLSEAHGALAPVYGTEVLEFCSLHQPVASPVGPPVPGPSHPA
FWTYTEAAHQAVLFPQQRLDQLAEIIERFIFVMPPVEAPAPSLHACHPPPWLAPRQASFK
EHLACELWPRARPLHRIVCNMRTQFPDLRLIQYDCGKLQTLAVLLRRLKAGAHRVLIFTQ
MTRMLDVLEQFLTYHGHLYLRLDGSTRVEQRQALMERFNADKRIFCFILSTRSGGVGVNL
TGADTVIFYDSDWNPTMDAQAQDRCHRIGQTRDVHIYRLISERTVEENILKKANQKRMLG
DMAIEGGNFTTAYFKQQTIRELFDMPLEEPAVPIPPVPSAPEEEEEAVANKQTHILEQAL
CRAEDEEDIRAATQAKAEQVAELAEFNENEGFPTGEGEESGRPGAEDEEVSRAEQEIAAL
VEQLTPIERYAMNFLEASLEDVSREELKQAEEQVEAARKDLDQAKEEVFRLPHEEELGAG
AGDETVCGTSGGSHRRNKKAKAPERPGTRVSERLRGARPETPVANTTATPPAHHTRSNST
APRHSRSPANERTPRASSRPRLVSVPTPVSTLAPATPPVLSTLPVSTSPPVLSLPPTLRP
EVEPSTQLEPLPQSSEPKYEEALVAGPKTPPLTPPSTKDLPSSTTELSIPEESFFPSILA
PSPTPKTEAVSNGHELDPPEHVEETTPIPPSDEELTLALSEDNDLGSPFSGAPAELSQEP
PDIQQPVEVRVPLPSPEKFEVPVSSEVTGPSASSSAASSPESPSPARPPRRRTSADVEIR
GQGTGRTGQPPGPKVLRKLPGRLVTVVEEKELVRRRRQQRPASTPPATGSSEIGVSPGSS
STRSNSEPESSPPLGGSCDSVPLTALPPQARRPLPARRRIDLGSSSGDSPENGEQGQLGL
PVMKRKRGRPPKNRSPGDAGRELHELLQPVPKDKTNGAELVASPVEKRKRGRPPKAREPP
TPGTLPIQGGGGTESRTPPPPLPSPPPIPLVPSPVPACPTAVSPSPPKRKRGRPPKNPPS
PRPSQPPAFEHDSSLGLEAGGGGKQQQKPSVESEGSSSDEDGGRPLTRLARLRLEAEGPR
VRKAEGSVAAIPNRDDAESAESGTGGTDSTTPPVPLLPVPRSTRLRPGSLVPPLESEKVP
RKRAVTPAIGGPVPAKRRYPRPRSPLGAEVSTEESEAEASGEEEAEGDGIPRRRPLPRRP
VVATPGDQRVLRSSAPMNTVGPSLSHRGRKAKT
NT seq
9282 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagtagcccctctcctgcccaccctcaacttccagttctccagacagagcagatg
gtatcagacagcatgacaggaagcaaccctgtatccccagcctcaactgactctccagcc
tccagtggggcaggtggcatctctccccaacacctagcccaggactcttccttggatggg
cctcctggcccccctgatgtctcctctgtgccactggttggacttggcttaccccagcct
gctgacccagccagtaagggtcctaagtgggagaaaagccacgctgagattgctgagcag
gccaagcatgaagcagaaatagaaacacgaatcgcagagcttcgaaaagagggcttctgg
tcactaaggcgactgcccaaggttcctgagccagcccgaccaaagggtcactgggactac
ctgtgtgaggaaatgcagtggctctctgctgactttgctcaggaacgaagatggaaacgg
ggtgtagctcgtaaggtagtacggatggtaattcgtcatcatgaggaacagcggcaaaag
gaagaacgggccaagcgggaagagcaggccaaattacgacgaattgcttcatccattgcc
aaggaagtcaagcagttctggagcaatgtggagaaggtggtacagttcaaacagcagtct
cgactagaggaaaagcgaaaaaaagccctagaccttcagcttgacttcattgtgggccaa
acagagaagtattccgatttgctgagccagagcctcaatcagcccctcgccccaacccca
agcaaagctggctcttctcctgcccttggttcttctcacactggttcagctgcttctagt
cccccacctcctgtcctcccccagcttgatgatgaagatggagactttcagccacaagaa
gaagaagaagatgatgaagagacgattgaggtagaggagcagcaagagggcaatgatgca
gagacccagagacgtgagattgaactgcttcgtcgtgagggagagctgcccttggaagag
ctactacgttctttgcccccccagctgctggttgcatcctccagtcccacccaggtccct
tcgtcaagtgatgctgactcccaagaggtcctggaggaggatggtgaagaagaagaacct
caccagggctcaaagagaaagcacccagcacctgtcacccaccgaaacaaacagttgtgg
cacccagatgaggaggatgaggagttcagagctgatgaggatgaagcggaggatgaagaa
gatacaatagcagctgaggaacaactggcaggggaggtagaccatgccacggaactcagt
gaattggcccgagaaggagagctttccgtagaggagttgctccagcagtatgcaggggcc
tatgcttcagatgcttcagtcccaggctcagggagtagtgaagatgaggaagatgaagat
gatgctaccagctctgaatccgaacaagatcaggaagaggaagagcatcctgaggaggat
agtagcagtcaatctgaatcggctgaggaagcaattgaggaggaagaggagaatgtttct
gaggaggaagaggcaagtgagaattcagactcagaggaatcagaagtgtctgagcagtct
gaggaggcccagcctaggaaccaagcagatgaagaagaagaagaggaagatgatgacttt
ggagtagagtatcttctggcccaggatgaagaacggagtgaagtcaaggaagacagtggc
cctgctgccccggggccccctccatcactaggacctaagaaggagataactgacattgct
gctgctgctgagagcctccaacccaagggctacaccctggctaccacccaggtgaagact
ccaatccctcttctgcttcggggccagctacgcgaataccagcatatcgggctggactgg
ctggtcactatgtatgagaagaagctcaacggcatccttgctgatgagatgggactggga
aagactatccagaccatctccctgctggcccacctggcctgcgaaaagggtaactggggg
cctcacttgatcattgtccccaccagtgtgatgttgaactgggagatggaactaaagcgt
tggtgccccagctttaaaatcctcacttactatggagctcaaaaagaaaggaagctcaag
cggcagggctggactaagcccaatgccttccatgtttgtatcacatcttataagctagtg
ctgcaggaccaccaggccttccgccgaaagaactggcgatacctcatcttagatgaggca
cagaatatcaaaaacttcaagtctcagcgatggcagtctttacttaacttcaacagccag
cgccgtctgctcttgacagggacgcctttgcagaatagcctaatggaattgtggtccctg
atgcacttcctgatgccccatgtcttccagtctcaccgagagttcaaggaatggttttct
aatcccttgactggcatgattgaaggcagtcaggagtacaatgaggggctagtcaaacgg
ctacacaaggtccttcggcccttcttactgcgccgggttaaagtggacgttgaaaagcag
atgcccaagaagtatgaacatgtaatccgttgccgtctgtcaaagcgtcagcgctgtctt
tatgatgacttcatggcacaggctactaccaaggagacacttgctactggtcacttcatg
agtgtcatcaacattctgatgcagctgcgtaaggtctgcaaccaccctaacttgtttgat
ccacggcccgtgacttctcctttcataactcccggcatctgctttagcactgcttcactg
gtgcttcaggccacagatacccatcccctgcagcgggtggacatgggccggtttgacctg
attgggctggagggccgagtatctcgttatgaggctgacacatttctgccccggcatcgc
ctctctcgccgggtacttctagaagtggccactgctccggacccccctcctcgtcccaag
cctgtcaagatgaaggttaacaggatgcttcagccagtgccaaagccagaaggccggaca
gtggttgtggtgaacagcccacggacacccttgagccctgccccagcccgacctccaggc
cctgagcactcggcccagctcacctctggcccaaccgctccagtgctgccagccccacta
ctggtgtcatcctcatcccctggggctccgcttagcccagcatcccggccccctggtcca
gtcctgctaccccctctgcagccaaacagtggctccctcccccaagtgctgtcaccccct
ctgggggtgctgggcggaaccccacggccccccaccccagccttgcccttgaagccatct
ccacctgccccagtgcgcctgagcccctctgctccacctggctcatccagcctgttaaag
cccctgacggtgccacctggctatgccttcccagctgcagctcctccaaccccagggcct
cagcgcctcatcctctcccctgacatgcaggcacgcctgccctccggtgaagtggtgagc
attgggcaattggcctccttagcacagcggccggtgcccagtacagggggcagtaaacct
ctcaccttccagatccagggcaacaaattgactttgactggtgcccaggtgcgccaactt
gctgtggggcagccccgcccgctgcaaatgcccccagccatggtgaacagctcaggagtg
gtgaagattgtagtgcgccaggccccaagggacggattgggtccttcaccgcagctggcc
cctccaccccgtccttccagctctggacttccagcgctgctaaccccacgacctgcacta
ccctctggccggctacctacccctccactgggccctacccgtagccccctgcccacactg
gtcaggcccctgctcaggctactgcatagtcccccaccagagacaactgcctcagttcct
ggctctgctcctgtccccatttcatcatcttcccttccagtctcaacctcacttcctggc
tcaagctcatctcctctctctagtcctatcttgtctccacttcccatctcggtctcgtct
ccacttgctggccctgtctcatctccccttcccagttcatgttccacttcactccctatt
ccaatctcagctccactctccaaccctaactcatctccgctccctgtcttagctccactt
cctgtttcagtctcaaccacagctctcttgcctaccgtggcttctgctgtctcaacacct
gcttcttcagcccagtcaccattaggggttgtttcatctgctccggcctcgacactgggc
ctgagtacaacttcttcacctgtaccagtccaggctccagtccaccttccaactctagca
tcaacttctacaaatgttcaaagccctaaccagactggagctccaacacctacaccagtc
ctggtttctgcttcagctttggcctcccctgttccaacaatatcatccccagcttcaact
caggctcccatcctgactccatcatctacagcacctcaggccctgacttcttcactggct
ccagggccagttccaccaacagcaatcctggcttcatctccagttcccattccagtcctg
gctccatcaccaagtcctactcctgtcctggttccgtcaccaactccagttccaattttg
agtccatcatcggttccagtatctaccttgacttcaactccgtcattggtgccagcccca
actccagtcctggctccatcatcaactcagactctggtaccagctatagtcccaacagct
tcagtaggcccaccttctacccagactctgaccctagccccagctttagcaccacctctt
agctcttctactcagacactctctctggctccagtgccccctctgggtccttctccagct
cagactctctcattggctccagtgtctcccctgggtccaactccagttcagaccctctcg
ttggctcctgcaactcctctgggtccatctccagctcagacactttcattggctcctgca
gctcctatgggtccatctccagctcagacacttgctttggctccaacttcccccttgggt
ccgactcagacactttctctggccccagtaccttctttgggtccagctcaggcactctct
ctggctcccactccacctttgggtccatctccagctcagactctatctctggctccagct
tccccactgggatcacctccagctcatgcactgactttggctccagctcagacactgaac
ctgaccccagcccaagttccagtgccccctctgggcccaactccagcacagacactgacg
ctggctccagcacagacaatatcttcagcccctctaccatcttccctcctggctccaact
tcaggcccagctccctcacaggtcgccatggtttctcggctgcctgtcgccaaggatgag
cctgaaactctgacgctgcgctcgggcccccctagccctccccttccggctacctcgttc
tgtggagcccggccccgacgccagccacctccaccaccccgctctcccttctatctggat
tctctggaggaaaaacggaagcgacaacgggcagaacgcctagaacgcctctttcagctg
agtgaggcccatggagcactggcacctgtgtatgggactgaagtgttagaattctgttcc
ttgcaccaacctgttgccagtccagttggaccccctgtccctgggcccagccatcctgcc
ttttggacttatactgaggctgcccaccaggctgtgttgtttccccagcagcgtcttgac
caactggcagaaatcattgagaggttcatctttgtcatgcctcctgtggaggctcctgcc
ccatcccttcatgcctgccacccgcctccttggctggctccacgccaggcatccttcaag
gagcatctggcttgtgaactttggccccgggctcggcccctgcaccgcatagtctgcaac
atgagaacccagttccctgacctgcggcttatccagtatgactgtggaaagctgcagaca
cttgcagtattgctaaggcgactcaaagctggggcacaccgggtgctcatcttcacccag
atgactcgaatgttggacgtattggagcagttccttacctaccacggccacctctaccta
cggctggatggttctacccgtgttgagcaaagacaggctttgatggagcggttcaatgca
gacaaacgaatcttctgcttcatactgtctacacgaagtggaggtgtgggtgtgaaccta
actggagcagacacggtcatcttctatgacagcgattggaaccccaccatggatgcccaa
gcccaggaccgctgccaccgcattggccagactcgagatgtgcacatctacaggcttatc
agtgaacggaccgtggaggagaatatcctgaagaaggccaatcagaagcgaatgctgggg
gatatggccatagagggcggcaacttcaccacagcctattttaaacagcagacaattcgt
gagctgtttgacatgcccttggaagagccagctgtccctatcccacctgtgccttctgcc
cctgaggaagaggaagaagctgtagccaataagcagacccacattttggaacaggcactg
tgtcgggcagaggatgaagaggatatccgtgcagccactcaagccaaggcagagcaggtg
gcagagcttgcagagttcaatgagaatgaaggtttccccactggggagggagaggagagt
gggcggccaggggctgaagatgaagaggtatcccgagctgagcaagagatcgctgccctt
gtggagcagctgacccctattgagcgctatgccatgaactttctggaggcatcgctggag
gatgtgagccgtgaggagttgaagcaagcagaagagcaagtagaggctgcacgaaaagac
ctagaccaggctaaggaagaagtatttcgtcttccccatgaggaggagctgggggccgga
gcaggggatgaaacagtctgtgggacaagtggaggcagccatcgccgtaataagaaagcc
aaggcccctgagcgtccaggaacccgagtcagtgaaaggcttcgtggagcccggcctgag
acaccagtggcaaatactactgctaccccacctgctcatcatacgcgtagtaactccact
gcccctcgtcacagccgaagccctgccaatgagagaaccccacgggccagctcacggccc
cggcttgtttcagttccaactcctgtgtccacactagctcctgccaccccaccagtactt
agtaccctaccagtttccacctctccaccagtcctcagcctaccaccaaccttgagacct
gaggtagaaccatcaactcagttggagccactccctcagtcatcagagcctaagtatgag
gaggcactagtggctggccccaagacccctccactaacccctccctccacaaaagacctg
ccatcaagtaccactgagctctctataccagaggagagtttcttccctagtatacttgcc
ccaagcccaacccctaagacagaggctgtttctaatggccatgagctggatcctccagag
catgttgaggagaccacaccaataccacctagtgatgaagagttaactctagccctaagt
gaggacaatgaccttgggtccccattctctggagctcctgcagagctttctcaggagccg
ccagacattcaacagccagtggaggttcgagtcccactacccagccctgaaaagtttgaa
gtccctgtttcatcagaggttacaggtccatcagcttcttcttcggctgcctcttcaccc
gagagtccttcaccagctcgtcctcccagacgtcgcaccagtgctgatgtggaaatccgg
ggacaagggacaggacggactgggcagcccccaggtcccaaggtactgagaaagctgcca
ggcaggctggtcactgtggtagaagagaaggagcttgtgcgaaggcgacgacagcagcgt
ccagcgtccacaccgccagcaacagggtcctcggagattggggtcagccctggaagctct
tcaaccaggagcaactctgagcctgaatcctcccctcctctgggaggttcctgtgattct
gtgccccttaccgctctgcctccccaagcccggcggcccttgcctgctcgccgccgcatt
gacctgggcagttctagtggggacagcccagagaatggagaacagggacagttaggtcta
cctgttatgaagcgcaaacgtggccgaccacccaagaacaggtcccctggggatgcaggg
cgtgaactacatgagttgctccaacctgtacctaaggacaagaccaatggggctgagtta
gtggcatcacctgtggaaaaacgaaagcggggacggccccctaaggcacgagaaccacct
accccaggaaccctgcccattcagggaggtggtggcactgagagccggacaccgccaccc
cctttgccatctccccctcccattcctcttgtcccttctcctgtccctgcctgcccaaca
gctgtctcgccttctccaccaaaacggaaacggggccgaccccccaaaaatccaccatca
ccccggcctagtcagccaccagctttcgagcatgacagttctttgggtcttgaagctggt
ggaggggggaaacaacagcagaagccttctgttgagagtgagggtagctcctctgatgag
gatgggggtcgccctcttactcgcctagcccgcctccgcttagaagcagagggtccgcgg
gttcggaaggcagaaggatctgtggcagccatccctaatagggatgacgcagagtcagca
gaaagtggcactggtggcactgattcaacaacaccccctgtaccactgctcccggttccc
cgctcaacccggctgcgtccgggctccctagtccccccactggagagtgagaaagtaccc
cgaaaacgggcagtgacaccagccattggtggccctgtcccagccaagaggaggtaccca
cgacctcgaagccctctgggggctgaggtgtcaacagaggaatcggaggctgaggcctca
ggcgaggaggaagctgagggtgatggtattccacgccgtcggcctctgccccgtcgccca
gttgtggccacccctggggaccagcgtgtcctgcgaagcagtgcccctatgaatacagtt
ggcccttccctcagccacagaggtcgaaaggctaagacgtga
DBGET
integrated database retrieval system
