Trichosurus vulpecula (common brushtail): 118833956
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Entry
118833956 CDS
T10126
Symbol
THOC1
Name
(RefSeq) THO complex subunit 1 isoform X1
KO
K12878
THO complex subunit 1
Organism
tvp Trichosurus vulpecula (common brushtail)
Pathway
tvp03013
Nucleocytoplasmic transport
tvp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118833956 (THOC1)
09122 Translation
03013 Nucleocytoplasmic transport
118833956 (THOC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tvp03019
]
118833956 (THOC1)
03041 Spliceosome [BR:
tvp03041
]
118833956 (THOC1)
Messenger RNA biogenesis [BR:
tvp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
118833956 (THOC1)
Spliceosome [BR:
tvp03041
]
Complex C
Other components
EJC/TREX
118833956 (THOC1)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
118833956 (THOC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
efThoc1
Death
bDLD3
Motif
Other DBs
NCBI-GeneID:
118833956
NCBI-ProteinID:
XP_036597285
LinkDB
All DBs
Position
1:240407951..240470709
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AA seq
665 aa
AA seq
DB search
MSPSPPLFSLPEAQTRFTNSTRDALINKNIKPLLSTFSQLAGSENEKKCTLDQAFRVILE
EEIITRASCENVLAIISLAIGGVTEGICTASTPFVLLGDVLDCLPLDQCDTVFTFVEKNV
ATWKSNTFYSAGKNYLLRMCNDLLRRLSKSQNTVFCGRIQLFLARLFPLSEKSGLNLQSQ
FNLENVTVFNTNEQESTLGQKHIEDRDEGMEVEEGEMGDDEAPTSCSIPIDYNLYRKFWS
LQDYFRNPVQCYEKISWKTFLKYSEEVLAVFKSYKLDDTQASRKKLEELKTGGEHVYFAK
FLTSEKLMDLQLSDSNFRRHILLQYLILFQYLKGQVKFKSSNYVLTDEQSLWIEDTTKSV
YQLLSENPPDGERFSKMVEHILNTEENWNSWKNEGCPSFVKESVHSICRRPSESKPTRVV
RKRGAPEDFLGKGSSKKILMGNEELTKLWNLCPDNMEACKSENREYMPTLEEFFEEAIEQ
ADPENMVENEYKAVNNSNYGWRALRLLARRSPHFFQPTNQQFKSLPEYLENMVIKLAKEL
PPPSEEIKTGEDEDEEDNDALLKENNESPDVRLDKPVKGDQIELFANKLGEQWKILAPYL
EMKDSDIRQIESDSEDVKLRAKQLLVSWQDQEGIHATPENLINALNKSGLSDLAESLTND
TETSS
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgtctccgtcgccgcctctcttcagtttgcccgaagcacagacccggtttacgaattct
accagagacgccttgatcaacaaaaatatcaagccattattgagtaccttcagccaatta
gctggaagtgaaaatgagaaaaaatgtactctcgatcaagctttcagagttattctagaa
gaggaaattataacccgtgcatcatgtgaaaatgttttggctattatttctcttgctatt
gggggagtcactgaaggtatttgtacagcatctacaccttttgtactattgggagatgtt
ttggactgtcttcctttggatcaatgtgacacagtcttcacctttgtggagaaaaatgtt
gccacttggaaatcaaatacattctattctgctggaaaaaactatttgttgcgcatgtgc
aatgatctcctaagaagattatcaaagtcccagaatacagtgttctgtggaaggattcag
cttttcttggccagactttttcctttgtcagagaaatcaggccttaacttacaaagtcag
tttaatctcgaaaatgtcactgttttcaacaccaatgaacaagagagcaccttgggtcag
aagcacatcgaggatagagatgaaggaatggaagtagaggaaggagaaatgggagatgat
gaagctccaacaagttgctccattccaattgattacaacctatatagaaaattctggtca
cttcaagattacttcagaaatcctgtgcagtgctatgagaagatttcatggaaaactttt
ctcaagtattctgaagaggttttagctgtttttaaaagttataaactggatgatactcag
gcctcaagaaagaaattagaagaattgaaaacaggaggagaacatgtatattttgcaaaa
ttcttaacaagtgaaaagcttatggatttacagctgagtgatagtaactttcgtcgtcac
atccttctgcagtatctcattttatttcagtatcttaaggggcaagtgaaattcaaaagt
tcaaactatgttctaactgatgaacaatccctgtggattgaagatactacaaaatcagtc
tatcaactactatctgaaaacccccctgatggagagagattttcaaaaatggtagagcat
atattaaacactgaagaaaattggaactcatggaaaaatgaaggctgtccaagttttgtg
aaagaaagtgtacattctatttgccgtagaccatcagaatccaagcctacaagagtcgta
cgaaagagaggcgcgccggaggatttcctgggaaaaggatccagcaaaaaaattctgatg
ggaaatgaggagctaacaaagctttggaatctctgtcctgataacatggaagcttgtaaa
tcagagaacagggaatacatgccaactttagaagaattttttgaagaagccattgagcag
gcagacccagaaaatatggttgaaaatgaatataaggccgtgaacaactccaattatggc
tggagagccctgaggctgttagcacgtcgcagtccccacttcttccaaccaaccaaccag
cagtttaaaagtttaccagaatatctagaaaatatggttataaaactagccaaggagttg
ccacctccttctgaagaaataaaaacaggtgaagatgaagatgaggaagataatgatgct
ttactgaaggaaaataatgagagtcctgatgttcggcttgacaaacctgtaaagggggac
caaatagagctgtttgctaacaagctgggagaacagtggaaaatactggctccatactta
gaaatgaaagactctgatataagacagattgagtctgacagtgaggatgtgaagctgaga
gctaagcagttactagtttcatggcaggatcaagaggggatacatgcaacacctgagaat
ctcattaatgcattgaataaatctggattaagcgaccttgcagaaagtctaactaatgac
actgaaacaagtagttaa
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integrated database retrieval system
