Trichosurus vulpecula (common brushtail): 118833992
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Entry
118833992 CDS
T10126
Symbol
USP42
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
tvp Trichosurus vulpecula (common brushtail)
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tvp01002
]
118833992 (USP42)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tvp04121
]
118833992 (USP42)
Enzymes [BR:
tvp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
118833992 (USP42)
Peptidases and inhibitors [BR:
tvp01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
118833992 (USP42)
Ubiquitin system [BR:
tvp04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
118833992 (USP42)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
zf_UBZ
Motif
Other DBs
NCBI-GeneID:
118833992
NCBI-ProteinID:
XP_036597327
LinkDB
All DBs
Position
1:540454612..540513352
Genome browser
AA seq
1401 aa
AA seq
DB search
MTIVDKVSESSNPSACQNQPGSSVAPSLGDMDSGSASWGAVSSLTDIPKHKISLGPVPGA
AIYSNSSISDKPKPSAQKDQSTGDGIAPPQKVLFPAEKICLKWQQSHRVGAGLQNLGNTC
FVNAALQCLTYTPPLANYMLSHEHSKICHEQGFCMMCTMQAHITQALNNPGNVIKPMPVI
NDLRRIAKHFRFGNQEDAHEFLRYTVDAMQKACLNGSTKLDRHSQATTLVCQIFGGYLRS
RVKCMNCKGVSDTFDPYLDIPLEIKAAQSVNKALEQFVKPEQLDGENSYKCSKCKKMVPA
SKRFTIHRSSNVLTLSLKRFANFSGGKIAKDVKYPEYLDIRPYMSQPNGEPIIYVLYAVL
VHTGFSCHAGHYYCYIKASNGQWYQMNDSIVSTSDIRSVLNQQAYVLFYIRSHDVKNGGE
HTHSIHTPGQSSPRPVINQRVVNSKQTVSGFIGPQLPPHMIKNSNHLNGTGPLKETPSCS
VASASNPNLNRASSAPASTSIQNWTVNRPSIIPEPPKKQKITISIHNKLPVRQGQSQPNL
HNSSLENLSKSIPSSTITNSSALQSTSNASTMSVATKVSKQITPSESCSKPVMNGKSKLT
SSVLVPYGAESSEESDEESKGLGKENGHAKPLNGLLTGNGVGILPNACSSCQDAEDDEAS
HHELPETVTVNGANSVENSEPKENGLSFDDPTCQVKPAKHSENPFSKTNGLHGKLMPTPL
PPLPEDRIVESFRFSNKLKSLTDDISSTGNEKPPEEEHGTELVIGSNSSASYEQLDKVTS
SLSCKIKNTFPPSDPNVIATKEEIPESIIAKPEDSIPNIISHCNTNKKAIGDDQFPKQCD
PGNFTDEKLILPQEIKGTVKENSLNSASGDAVEKLSQTPSNNFDTECDSNKLLVFISTEK
CKETKDLSKSIDMSTNELSATQLDKIVENHHYSKGSTEQSNSERCEENKVRQKVQSNSPV
KEKGGSPRKVDKGHHHNRRDHSSSGERTKQNRSKTENYYYKKRVSYSKERTKKGRHKSEH
CNGSKYKPFHNESSSPDSRSLGKHNHYWDRSRGKSDQERSRYYHSKSEQSWSREKYYPEG
MRRWDKYRYYSDHYSYSRDGREWKPSHSDREYDKASQYNSRSHKDYYKSKWVHEPAPKEK
ERHHSNSNKVDLSHCSSLPQHPEKYSHDKIALEENTSNLCSQFHEHEIVKMRKRKYDSIE
NDDSDLEKKIPKPLQNEPLEEQKVKKHKKSKKKKKSKDKHRARSCKHHQDLDLSVANSKA
DLRKHKKKKKKKKKHAKKSEDYIEHSDLHVLKASCSETDNKTWEKKDKSPIKDGLPSEDY
QKSNKRFHEEDDDHPEKTKHLRMESQDHKYHPAEYGQAKDLPSHKDYSQKVSSKQLDDSS
TSTDESRWKVNENSSSKEKIH
NT seq
4206 nt
NT seq
+upstream
nt +downstream
nt
atgactatagttgacaaagtatctgaatcttccaacccatcagcttgtcagaatcaacct
ggcagctctgtggcaccttcactcggagacatggactcaggctctgcaagttggggagct
gtatcttctttgacagacatccccaaacacaaaatttctttaggaccagtacctggtgct
gcaatttattctaattcatctatatccgacaaaccaaagccatcagcacagaaagatcaa
tctacaggtgatggcattgcacctccacagaaggtcctttttccagctgaaaaaatttgc
ctaaagtggcaacaatctcacagagttggggctgggctccaaaatctgggcaatacttgt
tttgtcaatgctgcattgcagtgtttaacatacacgccacctcttgccaattatatgtta
tctcatgaacactccaaaatatgccatgaacaaggattctgtatgatgtgtaccatgcag
gctcatattacccaggcactcaataatcctggtaatgtcatcaaaccgatgccagtcatc
aatgatcttcgacgtatagctaaacacttccgttttggaaaccaggaagatgcccatgaa
tttcttcgatacactgttgatgcaatgcagaaagcatgcctgaatggcagcactaaattg
gaccggcactcccaggctaccacacttgtttgtcaaatttttggaggctacctgagatct
cgagtgaagtgtatgaactgcaaaggagtttctgataccttcgatccataccttgatatt
ccactggaaataaaggctgcccagagtgtcaacaaagccttggaacagtttgtgaagcct
gagcagttagatggagaaaattcctataaatgtagcaagtgtaaaaagatggttccagct
tcaaagaggtttactatacatagatcatctaatgttcttaccttatctttgaaacggttt
gcaaatttcagtggtggaaaaattgccaaggatgtgaaatatcctgagtatcttgatatt
cgaccatatatgtctcaacctaatggagaaccaattatttatgttctatatgcagtgtta
gtgcatactggttttagctgtcatgctggtcattactactgttacataaaggctagtaat
ggacaatggtaccagatgaatgattccattgtttctaccagtgacatcagatcagtgctt
aaccaacaagcttatgtcctcttttatatcaggtcccatgatgtgaaaaatggaggtgaa
cacactcattccattcatactccaggacagtcttctcctcgaccagtgatcaatcaacgg
gtagtcaatagtaaacagactgtgtcaggttttattggaccacaacttcctcctcatatg
ataaagaattctaatcatttaaatgggactggacccttgaaagaaactccaagctgttct
gtagcaagtgctagtaatcctaatttaaacagagcaagttctgctcctgcttcaacttct
attcagaactggacagttaacagaccctcaattattcctgagcctcccaagaagcaaaaa
atcactatcagtattcataacaagttgcctgttagacaaggtcagtctcaacctaatctt
cacaacagttctttagaaaacctcagcaagtccattccctcatctaccattactaattct
tctgcattacaatctacctcaaatgcatcgacaatgtcagttgctactaaagtatcaaaa
cagatcacacctagtgaatcttgttccaagccagtaatgaatggcaagtccaagctcacc
tccagcgtgctggtcccttatggtgcagagtcttcagaagaatctgatgaggagtcaaag
gggctgggtaaggagaatggccatgcaaaacctcttaatggacttctgactggaaatgga
gttggtatactcccaaacgcttgttcttcctgtcaagatgctgaagatgatgaggcttct
catcatgaactgccagaaactgtgacagtaaatggtgctaatagtgtagagaatagtgaa
cctaaagaaaatggactgtcatttgatgatcccacttgccaagtcaagcctgctaaacat
tcagaaaatcccttttctaagacaaatggattacatggaaagttgatgcctactcctttg
cctccactcccagaagacagaattgtagagtctttcagattcagcaacaaattaaaaagc
ttgactgatgatataagttcaactggaaatgagaaaccacctgaagaagaacatggtaca
gaacttgtgattggtagcaacagttcagcttcctatgaacaactagataaagttacttca
agtcttagctgcaaaataaagaatacctttccaccctcagatcctaatgtcattgctacc
aaagaagaaattcctgaaagtattatagcaaaaccagaagactctattcccaatatcatt
agtcattgtaacactaacaagaaggccatcggagatgatcagtttcccaaacagtgtgat
cctgggaatttcacagatgaaaagctcatactaccccaagaaataaagggaacagtaaag
gagaattcactgaactctgcatcaggggacgcagtggaaaaattgagccaaactccttca
aataattttgacactgaatgtgatagtaataaactcttagtatttattagtactgaaaaa
tgcaaagaaacaaaggacctttctaaaagtatagacatgtctactaatgaactatctgct
acccagttagacaaaattgtagagaatcatcattattcaaaagggagcactgaacaaagt
aatagtgaacgatgtgaagaaaataaagttagacaaaaagttcaaagtaattctccagtt
aaggaaaaaggtggtagccccagaaaagtggacaaagggcatcaccataaccgaagagat
cattcttccagtggagaacgaacaaagcaaaacaggagcaaaacagagaactattattac
aaaaaaagggtctcctatagcaaagagaggaccaaaaagggccgtcacaaatcggaacac
tgtaatggaagcaaatataaaccttttcataatgaaagcagcagccctgacagtagatcc
ttaggaaaacataaccattattgggacagaagtagaggaaaatctgatcaggaaaggagt
agatattatcattctaaaagtgagcagtcttggagtcgggagaaatattatccagaagga
atgagaagatgggacaaatatagatactacagtgatcattattcttattcaagggatggt
agagagtggaagccatctcacagtgatcgagaatatgacaaagcaagtcagtacaatagt
agatcacacaaggactattataagagcaaatgggttcatgagccagcacctaaagagaaa
gaaaggcatcactcaaacagtaataaagtagacctgtcccattgttcatctcttcctcaa
catcctgaaaaatattctcatgacaaaattgcacttgaagaaaacacttcaaatctttgt
agtcagtttcatgagcatgaaattgtaaaaatgaggaaaaggaaatatgatagcatagaa
aatgatgatagtgacttagaaaagaaaatccccaaacccttgcaaaatgagccattagaa
gagcagaaagtaaagaagcacaaaaaatcaaaaaagaaaaagaaatccaaagacaaacac
agagctcgaagttgcaagcatcatcaggatttggatctttctgtagccaactccaaagct
gaccttcgcaaacacaaaaagaagaagaagaaaaagaagaaacatgcaaaaaaatcagag
gactatattgaacattcagatcttcatgtactcaaggcttcctgttctgagactgataac
aaaacctgggagaaaaaggacaaatctcccatcaaagatggcttgccatctgaggactac
cagaaatctaataaacgttttcatgaggaagatgatgatcaccctgagaaaaccaaacac
ttaagaatggaaagccaggatcataaatatcacccagctgagtatggccaggctaaagac
ctcccctctcataaggactacagtcagaaggtttccagtaaacagttggatgacagttct
acaagtacagatgaatctagatggaaagtgaatgaaaactcatcctcaaaagaaaaaata
cactag
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integrated database retrieval system
