Trichosurus vulpecula (common brushtail): 118834135
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Entry
118834135 CDS
T10126
Symbol
RNF38
Name
(RefSeq) E3 ubiquitin-protein ligase RNF38 isoform X1
KO
K19041
E3 ubiquitin-protein ligase RNF38/44 [EC:
2.3.2.27
]
Organism
tvp Trichosurus vulpecula (common brushtail)
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tvp04121
]
118834135 (RNF38)
Enzymes [BR:
tvp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118834135 (RNF38)
Ubiquitin system [BR:
tvp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118834135 (RNF38)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
zf-ANAPC11
VPS18_RING_C
zf_RING_Vps8_fungal
zf-C3H2C3
zf-RING-like
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
118834135
NCBI-ProteinID:
XP_036597465
LinkDB
All DBs
Position
1:547129701..547353446
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AA seq
378 aa
AA seq
DB search
MRPWEMTSNRQPPSVRPNQHHFSGERCNTPARNRRSPPVRRQRGRRDRLSRHNSISQDEN
YHHLSYGQQQAIEEPRAFHPPNVSPRMLHPAAHPPQQSAVMVDIHDQLHQGTVPVSYTVT
TVAPHGIPLCTGQHIPACNTQQVPGCSVVFSGQHLPVCSVPPPMLQACSVQHLPVPYAAF
PPLISSDPFLLHPPHLSPHHPPHLPPPGQFVPFQTQQSRSPYPPFMPRRLTGRSRYRSQQ
PIPPPPYHPSLLPYVLSMLPVPPAIGPAFSFELDVEDGEVENYEALLNLAERLGEAKPRG
LTKADIEQLPSYRFNPNNHQSEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKAN
RTCPICRADASEVHRDSE
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgcgaccatgggagatgacatcaaataggcagcctccttcagttcgacccaatcagcat
cacttctcaggggaacgatgcaacacacctgcacgcaacagaagaagtcctcctgttagg
cgccagagaggaaggagggatcgtctttctcgacataattccattagtcaagatgaaaac
tatcaccatctttcatatggacagcagcaagcaatagaggagcctcgagccttccatcct
ccgaatgtatccccacgtatgttacatcctgctgctcacccacctcagcaaagtgcagtg
atggttgacatacatgaccagctccatcaaggcacagtcccagtttcttatactgtaaca
acagttgctccacatgggattccactttgcactggccagcacatccctgcttgcaataca
cagcaggttccaggatgctctgtggttttcagtggacagcacctccctgtctgtagtgtg
cctcctcctatgcttcaggcatgttcagttcagcacttaccagtaccatatgctgcattc
ccacctcttatttctagtgatccatttcttttacatccacctcacctttctccacatcat
cctcctcatttgccaccacctggccagtttgtccccttccaaacacagcaatcacgatcg
ccttatcctccttttatgcctcgaagacttacaggacgtagtagatatcgatcccaacag
ccaataccacctcccccttatcatcccagcctcctaccatatgtactatcaatgcttcca
gtgccacctgcaataggtccagccttcagctttgaattggatgtagaagatggagaagta
gaaaattatgaggcattactaaatctggcagaacgactgggagaggctaagccacgtgga
ttaacaaaagccgatattgaacagctgccatcttaccggttcaatcctaacaaccaccag
tcagaacagactttgtgcgtagtatgcatgtgtgattttgagtcaaggcagctacttaga
gtgttaccctgtaaccatgagttccatgccaagtgtgttgacaaatggcttaaggcaaat
cgtacctgcccaatttgtcgagctgacgcttcggaagtgcatcgtgattcagaatga
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