Trichosurus vulpecula (common brushtail): 118834320
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Entry
118834320 CDS
T10126
Name
(RefSeq) LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein A3-like
KO
K12741
heterogeneous nuclear ribonucleoprotein A1/A3
Organism
tvp Trichosurus vulpecula (common brushtail)
Pathway
tvp03040
Spliceosome
tvp05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118834320
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
118834320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tvp03019
]
118834320
03041 Spliceosome [BR:
tvp03041
]
118834320
Messenger RNA biogenesis [BR:
tvp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
118834320
mRNA cycle factors
Common to processing body (P body) and stress granule
118834320
Spliceosome [BR:
tvp03041
]
Common components
Common spliceosomal components
hnRNP proteins
118834320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_PARP14_3
RRM_7
Nup35_RRM_2
PHM7_cyt
Motif
Other DBs
NCBI-GeneID:
118834320
NCBI-ProteinID:
XP_036597962
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All DBs
Position
1:complement(540426562..540428556)
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AA seq
380 aa
AA seq
DB search
MEVKQPPGRPQPDSGRCRRCRGKEGHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGT
LTDCVVMRDPQTKRSRGFGFVTCSCVEEVDAAMCARPHKVDGGVVEPKRAVSRDDSVKPG
VHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTV
DKIVVQKYHTINGHNCEVKKTLSKQEMQSAGSQRGRGGGXGNFMGRGGNFGGGGGNFGRG
GNFGGRGGYGGGGGGGSRGSYGGGDGGYNGFGGDGGNYGGGPGYSSRGGYGGGGGPGYGN
QGGGYGGGGGYDGYNEEGNFGGGNYGGSGNYNDFGNYSGQQQSNYGPMKGGSFGGRSSGS
PYGGGYGSGGGSGGYDSRRF
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atggaggtaaaacagccgcccggccgcccccagcccgactccggccgctgtcgccgctgc
agggggaaggagggtcatgatccaaaggaaccagagcagttgagaaaactgtttattggt
ggcttgagctttgaaactacggatgatagtttaagagaacactttgaaaaatggggcact
ctcacagattgtgtggtgatgagagatccccaaacaaaacgttccagaggctttggcttc
gtgacttgttcttgtgtagaagaggtagatgcagcaatgtgtgctcggccacataaggtt
gatgggggtgtagtggaacccaagagagctgtttctagagacgattctgtaaaacctggt
gtacatctaaccgtgaagaaaatttttgttggaggtattaaagaagatacagaagaatat
aatttaagagactactttgaaaagtatggcaagatcgaaactatagaagttatggaagat
cgacagagtggaaagaagagaggatttgcttttgtaacttttgatgatcatgatacagtt
gacaaaattgttgttcagaaatatcacactattaatgggcataactgtgaagtgaaaaag
accctttcgaagcaagagatgcaatctgctggctcacaaagaggtcgtggaggtggctga
ggcaattttatgggtcgaggaggaaactttggaggtggtggaggaaactttggccgtgga
ggaaactttggtggaagaggtggatatggtggtggtggtggtggtggcagcagaggcagt
tatggaggtggagatggtggatataatggatttggtggtgatggtggcaactatggaggt
ggtcctggctacagtagtagagggggttatggtggtggtggaggacctggatatggaaac
caaggtggtggatatggtggtggtggaggatatgatggttacaatgaagaaggaaatttt
ggtggtggtaactatggtggcagtggaaactataatgattttggaaattatagtgggcag
cagcaatcaaattatggacccatgaaaggaggcagttttggtggaaggagctcaggcagt
ccttatggtggtggttatggatctggtggtggaagtggtggatatgatagcagaaggttc
taa
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