KEGG   Trichosurus vulpecula (common brushtail): 118834925
Entry
118834925         CDS       T10126                                 
Symbol
ERCC8
Name
(RefSeq) DNA excision repair protein ERCC-8
  KO
K10570  DNA excision repair protein ERCC-8
Organism
tvp  Trichosurus vulpecula (common brushtail)
Pathway
tvp03420  Nucleotide excision repair
tvp04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:tvp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    118834925 (ERCC8)
  09124 Replication and repair
   03420 Nucleotide excision repair
    118834925 (ERCC8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tvp04121]
    118834925 (ERCC8)
   03400 DNA repair and recombination proteins [BR:tvp03400]
    118834925 (ERCC8)
Ubiquitin system [BR:tvp04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     118834925 (ERCC8)
DNA repair and recombination proteins [BR:tvp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      118834925 (ERCC8)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_EML_2 WD40_MABP1-WDR62_2nd EIF3I Beta-prop_WDR75_1st Beta-prop_EIPR1 Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 WDR55 Beta-prop_TEP1_C WD_LRWD1 ANAPC4_WD40 Beta-prop_EML Beta-prop_IFT122_1st WDR90_beta-prop_4th WD40_MABP1-WDR62_1st WD40_RFWD3 NBCH_WD40 Beta-prop_RIG_1st Beta-prop_WDR75_2nd Beta-prop_IFT140_1st Beta-prop_WDR19_1st Beta-prop_WDR11_1st Beta-prop_HPS5
Other DBs
NCBI-GeneID: 118834925
NCBI-ProteinID: XP_036598258
LinkDB
Position
1:complement(425742025..425804047)
AA seq 398 aa
MLGFLEARQAGLDDPGRLRRAEATRRVLKLELNKDRDVERIHGNGVNTLDIEPVEGRYML
SGGSDGIIALYDLENFSRKVHYTCRAICSVGRNHPDVHKYSVETVQWYPHDTGMFTSSSF
DKTLKIWDTNTLQPADVFHFEGTVYSHHMSPVATKHCLIAVGTKGPKVQLCDLKSGSFSH
ILQGHRQEILAVSWSPRYEYILATASADSKVKLWDIRRASGCLITLDQHNGEKSKASSEA
ANTAHNGRVNGLCFTRDGLHLLTTGTDDRMRLWNSSSGENTLVNYGKVCNESRKGLKFTI
SHGCSPEFVFVPYGSTIAVYTVYSGELITMLRGHYNTVDCCVFQPNFQELYSGSRDCNIL
AWVPALREPLPDEDDEVVSHSQKNPAFEDAWSSSDEEG
NT seq 1197 nt   +upstreamnt  +downstreamnt
atgctgggcttcctggaggcgcggcaagccggcctggacgatcctggcaggcttcggaga
gcagaggccacccggagggtcttaaaattggaattaaataaagaccgagatgtggaaaga
atacatggcaatggtgtcaacacccttgatattgaacctgtggaagggagatacatgtta
tcgggtggttcagatggcattatcgcactttatgaccttgaaaacttcagcagaaaagtt
cattacacttgcagagctatttgttctgtgggcagaaaccatcctgatgttcacaaatac
agtgtagagacagtacagtggtatcctcatgatactggcatgttcacctcaagctcattt
gataaaactctgaaaatatgggacacaaacacattacagcctgcagatgtatttcatttt
gagggaacagtctatagtcatcatatgtctccagttgccaccaaacactgtttgatagca
gttggtactaaaggccccaaagtacaactttgtgacttaaagtctggatccttttcccac
attcttcagggtcacagacaggaaatattagcagtttcctggtctccacgttatgaatat
atcttggcaacagcaagtgctgacagtaaagtaaaattgtgggatattaggagagcatca
ggatgcctgattactcttgatcagcacaatggggaaaagtccaaagcatcttctgaagca
gcaaacacagcccataatggaagagttaatggcctgtgctttacaagagatgggcttcac
cttctgactactggaacggatgatcgaatgcgactctggaatagttccagtggagaaaac
acactagtaaactatggtaaagtctgtaatgaaagtagaaaaggattgaaatttaccatc
tctcatggctgcagtccagaatttgtctttgtaccatatggtagcaccattgctgtttat
acagtttactcaggagaactgataactatgcttaggggacattataatactgttgactgc
tgtgtatttcaacctaatttccaggaactttacagtggtagcagagattgcaatattctt
gcttgggtgccagctttacgtgaacccctccctgatgaagatgatgaggttgtatctcat
tcacagaaaaatccagcttttgaagatgcatggagcagcagtgatgaagaaggatga

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