Trichosurus vulpecula (common brushtail): 118835571
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Entry
118835571 CDS
T10126
Symbol
RBBP4
Name
(RefSeq) histone-binding protein RBBP4 isoform X1
KO
K10752
histone-binding protein RBBP4
Organism
tvp Trichosurus vulpecula (common brushtail)
Pathway
tvp03082
ATP-dependent chromatin remodeling
tvp03083
Polycomb repressive complex
tvp04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
118835571 (RBBP4)
03083 Polycomb repressive complex
118835571 (RBBP4)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
118835571 (RBBP4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tvp03036
]
118835571 (RBBP4)
Chromosome and associated proteins [BR:
tvp03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
118835571 (RBBP4)
Histone modification proteins
HAT complexes
HATB complex
118835571 (RBBP4)
HDAC complexes
Sin3A-HDAC complex
118835571 (RBBP4)
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
118835571 (RBBP4)
PRC2.2
118835571 (RBBP4)
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
118835571 (RBBP4)
Heterochromatin formation proteins
Other heterochromatin formation proteins
118835571 (RBBP4)
Chromatin remodeling factors
NuRD complex
118835571 (RBBP4)
NuRF complex
118835571 (RBBP4)
NuRF complex (fruit fly)
118835571 (RBBP4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR75_1st
Beta-prop_EML
EIF3I
WD40_MABP1-WDR62_2nd
WD_LRWD1
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
WD40_RFWD3
ANAPC4_WD40
Beta-prop_DCAF12
WD40_MABP1-WDR62_1st
Beta-prop_RIG_1st
eIF2A
MIOS_WD40
Beta-prop_SPT8
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
118835571
NCBI-ProteinID:
XP_036598660
LinkDB
All DBs
Position
2:complement(70540076..70565248)
Genome browser
AA seq
461 aa
AA seq
DB search
MPSPPRKEAGLPSVKGPGFALALMEGDPGTLLLKEVKARSSAAFDDAVEERVINEEYKIW
KKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTSDEQNHLVIASV
QLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKT
PSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICL
WDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSK
PSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQ
WSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNP
NEPWVICSVSEDNIMQVWQMAENIYNDEDPEGSVDPEGQGS
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgccttcgcccccgaggaaagaagctgggcttccctcagtaaagggtcccgggttcgct
ctcgccttaatggagggggatcctgggactctcctgttgaaggaggtcaaagccagaagc
tcggcagcctttgatgatgctgtggaagaacgagtgatcaacgaagagtataaaatatgg
aaaaaaaatactccatttctgtatgatttagtgatgacccatgccctagaatggcccagc
ctgactgcacagtggcttccggatgtaaccagacctgaagggaaagatttcagcattcat
cgacttgtcctgggcacacacacatcagatgaacagaaccatcttgtgatagccagtgtg
cagctccccaatgatgatgctcagtttgatgcctctcattatgacagtgagaaaggagaa
tttggaggctttggctcagttagtgggaaaattgaaattgaaatcaagatcaaccatgaa
ggtgaagtaaacagggcccgttatatgccccaaaatccttgcatcattgcaacaaagact
ccatccagtgacgtccttgtttttgactataccaagcacccttcaaagccagacccttct
ggggagtgtaacccagacttgcgtctccgtggacatcaaaaggagggctatgggctgtct
tggaacccaaatctcagtggacacttgcttagtgcatcagatgatcataccatctgcttg
tgggacatcagtgcagttccaaaggaaggtaaagtagtggatgcaaagaccatattcaca
ggacacacagcagtagttgaagatgtttcttggcacctgctccatgaatctctctttgga
tcagttgctgatgatcagaagcttatgatctgggacacacggtcaaacaatacttctaaa
ccaagccactcagtggatgcccacactgccgaagtaaattgtctctctttcaatccgtat
agtgaattcattcttgccacaggatcagctgataagacagttgcattgtgggatcttaga
aatctgaaactaaaattgcattcctttgagtcacataaggatgaaatattccaggttcag
tggtctccccacaatgaaactatcttggcttccagtggcactgaccgcaggctaaatgtc
tgggacttgagtaaaattggagaagagcagtcacctgaagatgcagaagatgggccacca
gaattattgttcattcatggtggtcacactgccaagatatcagatttctcctggaacccc
aatgaaccttgggttatttgttctgtatcagaagacaatatcatgcaagtctggcagatg
gctgagaacatatacaatgatgaagaccctgaaggaagcgtggatccagagggacagggg
tcctag
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