Trichosurus vulpecula (common brushtail): 118835675
Help
Entry
118835675 CDS
T10126
Name
(RefSeq) sodium channel protein type 1 subunit alpha isoform X1
KO
K04833
voltage-gated sodium channel type I alpha
Organism
tvp Trichosurus vulpecula (common brushtail)
Pathway
tvp04728
Dopaminergic synapse
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09150 Organismal Systems
09156 Nervous system
04728 Dopaminergic synapse
118835675
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tvp04040
]
118835675
Ion channels [BR:
tvp04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
118835675
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
IQ
ATP-synt_B
New_glue
FUT8_N_cat
Lustrin_cystein
PFF1_TM
FraC
Motif
Other DBs
NCBI-GeneID:
118835675
NCBI-ProteinID:
XP_036598797
LinkDB
All DBs
Position
2:complement(218855430..218988593)
Genome browser
AA seq
1994 aa
AA seq
DB search
MEQTVLVPPGPDSFNYFTRESLAAIEQRIAEEKAKNPKPDKKDDDENGPKPNSDLEAGKS
LPFIYGDIPPGMVSEPLEDLDPYYINKKTFIVLNKGKAIFRFSATSALYILTPFNPLRKI
AIKILVHSLFSMLIMCTILTNCVFMTMSNPPDWTKNVEYTFTGIYTFESLIKIIARGFCL
EDFTFLRDPWNWLDFTVITFAYVTEFVNLGNFSALRTFRVLRALKTISVIPGLKTIVGAL
IQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCVQWPPTNSSYEEHTIEKNVTMDY
NGTLVNETIFEFDWKSYIEDEKYFYVLEGYMDALLCGNSSDAGQCPEGYMCVKTGRNPNY
GYTSFDTFSWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLILA
VVAMAYEEQNQATLEEAEQKEAEFQQMLEQLKKQQEAAQAAAAATASEHSREPSAAGGLS
ESSSEASKLSSKSAKERRNRRKKRKQKEQSGGEEKDEDEFHKSESEESIRRKGFRFSIEG
NRLTYEKRYSSPHQSLLSIRGSLFSPRRNSRTSLFSFRGRAKDVGSENDFADDEHSTFED
NESRRDSLFVPRRHGERRNSNISQASRSSRMLAVFPVNGKMHSTVDCNGVVSLVGGPSAP
TSPVGQLLPEGTTTETELKKRRSSSFHVSMDFLEDPTQRQRAMSIASILTNTVEELEESR
QKCPPCWYKFSNIFLIWDCSPHWLKVKHIVNLIVMDPFVDLAITICIVLNTLFMAMEHYP
MTPHFNNVLSVGNLVFTGIFTGEMFLKIIAMDPYYYFQEGWNIFDGFIVTLSLVELGLAN
VEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQL
FGKSYKDCVCKIAPDCELPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQAMCLTV
FMMVMVIGNLVVLNLFLALLLSSFSADNLAATDDDNEMNNLQIAVDRMHRGVAYVKRKIY
EFIQQAFVRKQKVLDEIKPLDDLNNKKDSCMSNHTTEAGKDLDYLKDANGTTSGIGTGSS
VEKYIIDESDYMSFINNPSLTVTVPIAVGESDFENLNTEDFSSESDLEESKEKLNESSSS
SEGSTVDIGLPEEEQPVAEPEEALEPEACFTEGCVRRFKCCQVSVEEGRGKQWWNLRKTC
FRIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKIMLEYADKVFTYIFILEMLLKW
VAYGYQTYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFE
GMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYHCVNTTTGDMFDISEVY
NRSQCLELIERNETARWKNVKVNFDNVGFGYLSLLQVATFKGWMDIMYAAIDSRNVELQP
KYEDNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAM
KKLGSKKPQKPIPRPGNKFQGMVFDFVTRQVFDISIMILICLNMVTMMVETDDQSEEMTS
ILSRINLVFIVLFTGECVLKMISLRHYYFTIGWNIFDFVVVILSIVGMFLAELIEKYFVS
PTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSN
FAYVKREVGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNSGPPDCDPQKVHPGSS
VKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFSVATEESAEPLSEDDFEMFYEV
WEKFDPDATQFMEFEKLSQFAAALDPPLNLPQPNKIQLIAMDLPMVSGDRIHCLDILFAF
TKRVLGESGEMDALRIQMEERFMASNPSKASYEPITTTLKRKQEEVSAVIIQRAYRRHLL
KRTVKQASFTYNKNKLKGGANLLVKEDILIENSITEKTDLTMSTAACPPSYDRVTKPILE
KHEREDKDDKAKGK
NT seq
5985 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaacagtgcttgtaccaccgggacctgacagcttcaactacttcaccagagaa
tctcttgcagctattgaacaacgcattgcagaagagaaagctaagaatccaaaaccagac
aagaaagacgatgacgaaaacggcccaaaaccaaatagtgacttggaagctggaaagtcc
cttccgtttatttatggagacattccacccggaatggtgtctgagcccttggaggacctg
gacccatattatatcaataaaaaaacttttatagtattgaataaagggaaggcaatcttc
cgattcagtgccacttctgccctgtacattttaactcccttcaatcctcttaggaaaata
gctattaagattttggtacattcattattcagcatgcttattatgtgcactattttgaca
aactgcgtgtttatgacaatgagcaatcctcctgactggacgaagaatgtagagtatact
ttcacaggaatatatacatttgaatcacttataaaaatcattgccaggggtttctgttta
gaagatttcacttttctccgggatccatggaactggcttgatttcactgtcattacattt
gcgtatgtaacagaatttgtaaacctaggcaatttttcagctcttcgaactttcagagtc
ttgagagctttgaaaactatttctgtaattccaggcttgaagactattgtgggggctctg
attcagtcagtgaagaagctttctgatgtcatgatcctgactgtgttttgtctgagtgta
tttgctctcattggactacagttgttcatgggcaacctgaggaataaatgtgtacaatgg
cctcccaccaattcctcttatgaggaacacactattgaaaagaatgttactatggattac
aatggcacccttgtgaatgaaaccatctttgagtttgactggaaatcttacattgaagat
gaaaaatatttttatgttctggaaggatatatggatgcgctcctctgtggtaacagctca
gatgccggccagtgtccagaaggatatatgtgtgtaaaaactggccgaaatcctaattat
ggttacacaagctttgatacgttcagctgggctttcttgtccctgtttcgactgatgact
caggacttctgggaaaacctttatcagctgacactacgtgcagctggcaagacatacatg
atattttttgtcctggtcattttcttgggctctttctaccttataaatttgatcctggct
gtggttgccatggcttatgaggagcagaatcaggccaccttggaagaggcagagcagaag
gaggctgagtttcagcagatgctggaacagcttaagaagcaacaggaagcagctcaggca
gcagcagcagccactgcctctgagcattccagagaacccagcgcagcaggtggcctctca
gagagttcttcagaagcttcaaagctcagttcaaagagtgcaaaagaaagaaggaacagg
cggaagaaaagaaaacagaaagaacagtcaggtggagaagagaaagatgaggatgaattc
cacaaatctgaatctgaagagagtattaggaggaaaggcttccgattctccattgaaggg
aaccgattgacctatgaaaagaggtactcctccccacaccagtccttgttgagcattcgt
ggctccctgttttctccaaggcgcaacagcagaacaagccttttcagctttagagggcga
gcaaaggatgtgggatctgagaatgactttgctgatgatgaacacagcacatttgaggac
aatgaaagcaggagagattccctctttgtgccccgccgccatggagaaaggcgcaacagt
aacataagtcaggccagtagatcatcccggatgctggcggtgtttccagtgaatgggaag
atgcacagcactgtagattgcaatggtgtggtttccttggttggtggaccttcagctcct
acatcgcctgttggacagcttctgccagagggcacaactacggaaacagaacttaaaaag
agaaggtcaagttctttccatgtttccatggattttctagaagatcctacccaaaggcaa
agagcaatgagtatagccagtatattaaccaatactgtggaagaacttgaagaatccaga
cagaagtgcccaccctgctggtataaattttccaacattttcttaatctgggattgttcc
ccacactggttgaaagtgaaacacattgtcaatctaattgtgatggatccatttgttgac
ctggcaattaccatctgcattgtcttaaatacgctgttcatggccatggaacattatcca
atgactcctcatttcaataatgtgctttcagtaggaaacttggtctttactgggatcttc
acgggagaaatgtttctgaagataattgccatggacccctattattattttcaagaaggc
tggaacatctttgatggttttattgtgacccttagtttagtagaactcggactggccaat
gtggaaggattatctgttctccgttcttttcgactgctccgagttttcaagttggcaaag
tcttggccaacactaaatatgctgataaagatcattggcaactcagtgggagctctggga
aacctgacattggtgttggccattattgtttttatttttgctgtggttggcatgcagctc
tttggtaaaagctacaaagattgtgtctgcaagattgcccctgactgtgaacttccacgc
tggcacatgcatgacttctttcattccttcctgattgtgttccgggtactatgtggagaa
tggatagagaccatgtgggactgtatggaagttgctggccaagccatgtgtcttactgtt
ttcatgatggtcatggtgattggaaatctagtggtactgaacttgtttctggccttacta
ctgagttcatttagtgcagacaaccttgctgctacagatgatgataacgaaatgaacaac
ctccagattgctgtggatcgaatgcatcggggagtagcttatgtgaaaaggaaaatatac
gaattcattcagcaggcctttgtcagaaaacagaaggttttagatgaaatcaaaccactt
gatgatctgaacaacaagaaagatagctgcatgtccaatcacacaacagaagcaggaaaa
gatcttgattatctgaaagatgccaatgggactacaagtgggattgggacaggcagcagt
gtggaaaaatatataattgatgaaagtgattacatgtcattcataaacaaccccagcctc
acagtaacagtgccaattgctgttggagaatctgactttgaaaatttaaacacagaagac
ttcagcagcgaatcagatctggaagaaagcaaagagaaactcaatgagagcagcagctca
tctgaaggcagcacggtagacattgggcttcccgaggaggaacagcctgtagcagagcct
gaagaagcccttgaacctgaagcctgtttcactgaaggctgtgtacgaaggttcaaatgc
tgtcaagtcagcgtggaagaaggcagaggaaaacagtggtggaacctgagaaaaacctgt
ttcaggatagttgaacataactggtttgagactttcattgttttcatgattcttctcagt
agtggtgctctggcatttgaagacatttacattgaacagcgcaagactattaaaatcatg
ttggaatatgctgacaaagttttcacttacatcttcattctagaaatgcttctaaagtgg
gtggcatacggctatcaaacttatttcactaatgcctggtgttggttagactttttgatt
gttgatgtctctttggttagtttaacagcaaatgccttgggctactcagaacttggtgcc
attaaatccctcagaacactaagagctctgagacctcttagagccctatcaagatttgag
ggaatgagggtggttgtgaatgccctcttaggagccattccctccatcatgaatgtgctt
ctggtttgtcttatattctggctaattttcagcatcatgggagtcaatctgtttgccggc
aagttctaccactgtgttaataccacaactggtgatatgtttgacatctcagaagtctat
aatcggtctcagtgtttggaacttatagaaagaaatgagactgcccggtggaaaaacgtt
aaagtaaactttgataatgtaggatttgggtatctctctttacttcaagtagccacattt
aaaggatggatggacattatgtatgcagctattgactcaagaaatgtggaactacagccc
aaatatgaagacaacctttacatgtatctttactttgttattttcatcatctttgggtca
ttcttcaccttgaatctgttcattggtgtcatcattgataatttcaatcaacaaaaaaag
aagtttggaggccaggacatcttcatgacagaggagcagaagaaatactacaatgcaatg
aaaaaactggggtccaagaaaccacaaaagccaataccacggccagggaacaaattccag
ggaatggtctttgattttgtaaccagacaagtctttgatatcagcataatgattctcatc
tgcctcaatatggtcaccatgatggtagagactgatgatcaaagtgaagaaatgactagc
attctgtcccggattaacctggtgttcattgtcctcttcactggagaatgtgtgctgaag
atgatctccctccgccattactacttcaccataggatggaacatttttgattttgtggtg
gtcattctatccattgtaggcatgtttctagcagagctgatagaaaaatatttcgtgtcc
cctaccctgttccgtgtaatccgtcttgccaggatcggaagaatccttcgtctcatcaaa
ggagctaagggaatccgaacacttctctttgctttgatgatgtccctccctgctctgttt
aacattgggctccttctcttcctggtcatgtttatctatgctatctttggaatgtccaac
tttgcctatgtcaagagggaagttggaattgatgacatgttcaattttgaaacctttggc
aacagcatgatctgcctcttccaaattaccacatctgctggttgggatggtttgcttgca
cccattcttaacagtggaccaccagattgtgaccctcaaaaagttcaccctggaagctct
gtcaaaggagattgtgggaacccctctgttgggattttcttttttgttagttacatcatt
atctcattcctggtggtagtaaacatgtacatcgctgttatcctagaaaacttcagtgtt
gctactgaagagagtgctgagccactcagtgaggatgactttgagatgttttatgaggtt
tgggagaagtttgatcctgatgctactcaattcatggaattcgaaaaactttctcagttt
gcagctgctctagatccgcctctcaatttgccacaaccaaacaaaattcaacttattgcc
atggatctgcccatggtaagtggggaccgaattcactgccttgacatcctatttgctttt
acaaagcgtgttttgggagagagtggagagatggatgccctccgaatacagatggaagag
aggttcatggcttctaatccttccaaagcctcctatgagccaattaccacaacactgaaa
cgaaaacaagaagaagtgtctgctgttatcattcaacgggcttacagacgtcacctttta
aagcgaacggtaaaacaagcctcatttacttataacaaaaataaactcaaaggtggggca
aaccttctggtgaaagaagacattcttattgaaaactctatcacagaaaaaacagatctg
accatgtccacagcagcttgcccaccttcctatgaccgagtaacaaagccaatcctggag
aaacatgagagggaagacaaagatgacaaggccaagggaaagtaa
DBGET
integrated database retrieval system
