Trichosurus vulpecula (common brushtail): 118835685
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Entry
118835685 CDS
T10126
Symbol
SRRM1
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
tvp Trichosurus vulpecula (common brushtail)
Pathway
tvp03013
Nucleocytoplasmic transport
tvp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118835685 (SRRM1)
03015 mRNA surveillance pathway
118835685 (SRRM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tvp03019
]
118835685 (SRRM1)
03041 Spliceosome [BR:
tvp03041
]
118835685 (SRRM1)
Messenger RNA biogenesis [BR:
tvp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
118835685 (SRRM1)
Spliceosome [BR:
tvp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
118835685 (SRRM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
118835685
NCBI-ProteinID:
XP_036598809
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All DBs
Position
2:58661938..58698635
Genome browser
AA seq
914 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMGKVNLEVIKPWITKRVTEIL
GFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIP
SAFLELKKEEIKQRQIEQEKLASMKKQDEDKDKRDKEEKESSREKRERSRSPRRRKSRSP
SPRRRASPVRRERKRSHSRSPRHRTKSRSPSPAPEKKEEIPELPEPSVKAKEPSIQEATS
TSDILKAPKPEPIPEPKEPSPEKNSKKEKEKEKTRPRSRSRSKSRSRTRSRSPSHTRPRR
RHRTRSRSYSPRRRPSPRRRPSPRRRTPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSS
SSSSSRSRSPPKKPPKRISSPPRKTRRLSPSSSPPRRRHRPSPPASPPPKTRRSPTPQQS
NRTRKSRGSVSPGRTSGKATKHKGTEKRESPSPAPKPRKVELSESEEDKGGKMAAADSVQ
QRRQYRRQNQQSSSDSGSSSSSEDERPKRSNVKNGEVGRRRRHSASRSASPSPRKRQKES
SPRMQMGKRWQSPMIKSSRRRRSPSPPPARRRRSPSPAPPPRRRRSPTPPPPPPRRRTPS
PPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKP
RSSPVTKRRSPSLSSKHRKGSPPSRSTRETRSPLPNKRHSPSPRPRLPHTSASPPPLRRG
ASSSPQRRQSPSPSTRPIRRVSRTPEPRKAKKAASPSPQSVRRVSSSRSASRSPEPAAKK
HQAPPSPTQSQSPSTNWSPAAPVKKAKSPTPSPSPARNSDQEGGGKKKKKKKDKKHKKDK
KHKKHKKHKKEKAAAAAAAAVASTTTSAQEEPEAETEPKKETESEAEDNLDDLEKHLREK
ALRSMRKAQVSPQS
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgggattcttccgcggaacaagtgcggaacaggacaatcgtttcagcaataaa
cagaagaagctactgaagcagttgaagtttgcagaatgtctagaaaaaaaggtagacatg
ggcaaagtaaatttggaggtgattaagccttggattacaaaacgagtaacagaaattctt
ggatttgaggatgatgtagtaattgaattcatattcaaccagctggaagtgaagaatcca
gattccaaaatgatgcagattaacctgactgggttcttgaatggaaaaaatgctagagaa
tttatgggagagctgtggccccttttgttgagtgcacaggaaaacattgctgggatccct
tctgctttcttggaactgaagaaggaggaaataaaacaaagacagattgaacaagaaaaa
ctggcatctatgaagaaacaagatgaagacaaagataagagggacaaagaagaaaaggag
agcagcagagagaaaagggagcgatccagaagcccaagaagacgcaagtccagatctcct
tcccctagaagacgtgcctcccctgtcagacgagagagaaagcgaagtcattctagatct
ccccgtcatagaaccaagagccgaagcccctcccctgctccagaaaagaaagaagagatc
ccagaacttccggaaccttcagtaaaggctaaggaaccctcaatacaagaggcaacctct
actagtgacattctgaaagctcccaaacctgaacctataccagaaccgaaggaaccttca
ccagaaaaaaattcaaaaaaggaaaaagaaaaggaaaaaacccgcccgaggtctcgatca
cgatccaaatcgaggtcacgaacacgttcccggtccccttctcatactcgacctaggcgg
cgtcatagaacacgatcaaggtcatattcgcctagaaggcgaccaagtccaagaaggcgg
ccatctcctcgaagaagaacccctccaagacgaatgcctcctccaccaaggcatagaaga
agtcgatctcctgtgagacgaaggcggcgctcgtcggcatctctctctggcagcagctcg
tcatcatcttcgtcccgttcccggtcacctccaaagaagccacccaaaagaatctccagc
ccccctagaaaaactcgtagactctctccgtcttcaagccctccacggcgaaggcatcgg
ccatctccgccagcaagcccaccgccaaaaacccgtcggtcaccaacaccccagcagtca
aatcgtacaagaaaaagtcgtggctctgtttctccagggagaacctcaggtaaagcaaca
aaacataaaggtacggagaaaagggagtcaccttcaccagcaccaaaacctcggaaagta
gagttatctgaatcggaagaagacaaaggtggcaaaatggcagcagctgattccgtgcaa
cagaggcggcagtaccggaggcaaaaccagcagtcttcttctgactctggctcctcctcc
tcttcagaagacgagcgaccgaagagatcaaacgtgaaaaatggagaagtgggaaggcgt
cgacgacattcagcctcccggagtgcatccccatcaccacggaaacgccagaaagagtcc
tctcctcggatgcagatgggaaagaggtggcaatcgccaatgattaaaagtagcagacgg
agaagaagtccatcaccaccaccggccagacgacggcgctctccttctcctgcccctcca
ccccggcggcggaggtctcccacaccgccgccgccaccaccacggcgcaggactccttct
cctcctccacgtcgacgctcaccttctccaagaagatactctcctccaatccagagaaga
tactctccttccccccctcctaagagaagaacagcttccccaccaccacctcccaagcga
agagcatcgccatcgcctcccccaaagcgacgggtctcccattcgccacctccgaagcca
agaagttcccctgttacaaagagacgttccccttccttatcatctaagcataggaaaggg
tcaccccctagccgatctacccgagaaacccggtctcctctaccaaacaaacggcattca
ccttcaccacggcctcgacttcctcatacctctgcaagtcctcccccactccgaagagga
gcttcatcttcaccccaaagaaggcagtccccatcaccaagcactaggcctatcaggaga
gtctccagaaccccggaacccagaaaagcaaaaaaggctgcctcaccaagtccccagtct
gtaagaagggtctcatcttccagatctgcctccagatctcctgagccagcagctaagaaa
caccaagcacctccatcccccacccagtctcagtccccatccacaaactggtcgccagca
gcacctgtcaagaaggctaaaagccccacgccgagcccatcgcctgccaggaattcagac
caggaaggtggtgggaagaaaaagaagaagaagaaggacaaaaaacacaaaaaggacaag
aagcacaaaaaacacaaaaaacataagaaggagaaggcggcagctgctgctgctgctgct
gtggcatccaccaccacatcagcccaggaagaacctgaagcagagacagagcccaaaaag
gagaccgagagtgaagctgaagacaacctggatgacctagagaaacaccttcgggaaaag
gcactgaggtccatgagaaaggcgcaagtgtccccacagtcctag
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