Trichosurus vulpecula (common brushtail): 118836305
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Entry
118836305 CDS
T10126
Symbol
CHD5
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
tvp Trichosurus vulpecula (common brushtail)
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tvp03036
]
118836305 (CHD5)
Chromosome and associated proteins [BR:
tvp03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
118836305 (CHD5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHDCT2
CHDII_SANT-like
Helicase_C
DUF1087
HDA2-3
HTH_Hrp3
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
118836305
NCBI-ProteinID:
XP_036599530
LinkDB
All DBs
Position
2:23915073..24074082
Genome browser
AA seq
1094 aa
AA seq
DB search
MRVECGGNASSLPVMDPFGGYSEQTAGLCIQVAVGYLGAPKKYYKFILTRNFEALNSKGG
GNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKLMLLQKMLKKL
RDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCF
LLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEE
RITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEELFKDDVEGMMPQGQRIN
VPEPVAPAPDVQASKGGGTLAAGVKKKHGSTPPGDNKDVEDSSVIHYDDAAISKLLDRNQ
DATDDTELQNMNEYLSSFKVAQYVVREEDGVEEVEREIIKQEENVDPDYWEKLLRHHYEQ
QQEDLARNLGKGKRIRKQVNYNDASQEDQEWQDELSDNQSEYSIGSEDEDEDFEERPEGQ
SGRRQSRRQLKSDRDKPLPPLLARVGGNIEVLGFNARQRKAFLNAIMRWGMPPQDAFNSH
WLVRDLRGKSEKEFRAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHVLTRIGVMSLV
RKKVQEFEHVNGKYSTPDLIPESKKSSEIVSSDPNTPVPASPAHLPPGPLGLPDKMEAQL
GFLDEKEQMEQKPPKPPEPQVPGMPADKGEGEEKLESLENKEKAREERREENEKTDPSSD
QLLKEDALPEKDKPLEKVELNLNHGRGDEKDFRSEDSKVEEKETAETQQNGEKEEDEEGK
KDDKNGKFKFMFNIADGGFTDEETEAQSGQVTNSWQELHTLWQNEERAAVSSGKIYDIWH
RRHDYWLLAGIVTHGYARWQDIQNDPRYVILNEPFKSEIHKGNYLEMKNKFLARRFKLLE
QALVIEEQLRRAAYLNMTQDPNHPAMALNARLAEVECLAESHQHLSKESLAGNKPANAVL
HKVLNQLEELLSDMKADVTRLPSMLSRIPPVAARLQMSERSILSRLTNRAGDPTVQQGSF
GSSQMYNNNFGPNFRAPGPGGIVNYSQMPLGPYVTATPTGPPASHPDRKGADSLKDGAAL
GRKGKLSDVICIED
NT seq
3285 nt
NT seq
+upstream
nt +downstream
nt
atgcgagtggagtgcgggggaaacgcctcctccctcccagtgatggatccatttggaggc
tactccgaacaaacggcaggactctgcatccaggtagccgtgggctacctgggggccccc
aagaaatactacaagttcattctgaccagaaattttgaagccttgaactccaaaggcggt
ggaaaccaggtgtcgctacttaacatcatgatggacctgaagaaatgctgcaaccacccc
tatctcttccctgtggctgccgtggaggcaccagtcttgcccaatggctcctatgatggc
agctccttggtcaagtcttctgggaagctcatgcttctccagaagatgctgaaaaagttg
cgtgatgaagggcaccgggttttgatcttctcccagatgaccaaaatgctggatctgcta
gaggacttcctggagtatgaaggctataagtatgagcgaattgacggtgggatcacggga
ggtcttcggcaagaagccatcgacagattcaatgctcctggagcccagcagttctgtttc
cttctctccacccgggctggtggcctgggcatcaacttggccactgctgacaccgtcatc
atctacgactcggactggaatcctcacaatgatatacaggccttcagcagagcccaccgc
atcgggcagaacaagaaagtaatgatttaccgatttgtgacgagggcctccgtggaggag
cgaatcacccaggtcgccaaacgcaagatgatgctgacgcatctggtggtgcgacccggc
ctgggctccaagtctggttccatgaccaagcaggagctggacgacatcctgaagtttggg
acggaggagctctttaaagatgacgtggaaggcatgatgcctcagggtcagcggatcaac
gtgcccgagcccgtggcgcccgcccccgatgtccaggcctccaaaggtggtggcacctta
gcagctggggtgaaaaaaaagcatggcagcaccccaccaggtgacaacaaggatgtggag
gacagcagtgtgattcattacgatgacgccgccatatccaagctgctggatcggaaccag
gacgccacggatgacacagagctgcagaacatgaatgagtacctcagctccttcaaggtg
gcccaatacgtggtccgtgaagaagacggagtggaggaggtagagagggagatcattaag
caggaggagaatgtggaccccgactactgggagaagctccttcgtcaccactatgagcag
cagcaagaggatctggcccgaaatctgggcaagggcaagagaatacggaaacaggtcaat
tataatgatgcttcccaggaggaccaagaatggcaggatgagctttcggacaaccagtcg
gagtactccatcggctccgaggatgaggatgaggattttgaagagaggccagaaggtcag
agtgggaggagacaatcccggaggcagctaaaaagtgaccgggacaaacccttaccccct
ctgctggcaagagttggaggcaacattgaggtcctcgggttcaatgcccggcagcggaaa
gccttcttgaatgccatcatgcgctggggcatgcccccccaggatgccttcaactctcac
tggctagtccgggacctccgagggaaaagcgagaaggaatttagggcctacgtgtccctc
ttcatgagacacttgtgtgagccaggggccgacggggcggagacctttgcggacggtgtc
cctcgggaggggctctctcgacagcatgtgctcacccggattggagtcatgtcactagtt
aggaagaaggtccaggagtttgaacatgttaatgggaagtacagcacacctgacctgatt
cctgagagcaagaaatccagtgaaattgtctcctcagaccccaacactccagtcccagcc
agcccagcccatcttcctcctggccctttggggctaccagacaaaatggaagcccaactg
ggcttcctggatgaaaaagaacaaatggaacagaaaccccccaaacctcctgaaccccag
gttccagggatgcccgctgacaaaggggagggtgaggagaagctggagagcctggagaac
aaagagaaagccagagaggagaggagggaagagaatgaaaagacagacccctcctcagat
caactactgaaagaggatgctctccctgaaaaagacaaacccctggagaaggtggaatta
aacctgaaccatgggagaggagatgaaaaagatttccggtcagaggactccaaggtagaa
gagaaggaaacagcagaaacccagcaaaatggtgaaaaagaggaagatgaagaagggaag
aaggacgacaagaatgggaaatttaaatttatgtttaacattgctgatgggggtttcaca
gatgaggaaactgaggcacagagcggccaagtgactaactcatggcaagagttacataca
ctgtggcagaatgaggagagagcggccgtctcctcagggaagatctatgatatttggcat
cggcgccatgattactggctcctggcgggtattgtgacgcacggctatgcccgctggcag
gacatccagaatgacccacgctatgtgatcctgaacgagcccttcaagtctgagatccac
aagggcaattacctggagatgaaaaacaaattcctggcccgaaggttcaagctgctagag
caagcactggtgattgaggagcagcttaggagggctgcgtacctcaacatgacccaagac
cccaaccatccagccatggccttgaacgcccgtctggcagaagtggaatgccttgctgag
agccaccagcacctgtccaaggagtccctggctgggaacaagcccgccaatgctgtcctc
cataaggtactgaaccagctggaggaacttttgagtgacatgaaggctgacgtaacccgc
ctgccctccatgttgtcccggatcccgcctgtggctgctcgtctgcagatgtctgaacgc
agcatcctgagccgcctgacaaaccgtgccggagatcccaccgtccagcagggttctttc
ggctcctcccagatgtacaacaacaactttgggccaaacttccgggctcctggaccaggc
gggattgtcaactacagccagatgcccctcggcccctatgtgactgccacgcccactggg
ccacctgccagccaccccgacagaaaaggagctgactccctgaaagatggtgctgctttg
ggacgaaaggggaaactcagcgacgtcatctgcattgaagactaa
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